Protein–RNA interactions for Protein: Q6P9Z1

Smarcd3, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 3, mousemouse

Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcd3Q6P9Z1 Gm15544-201ENSMUST00000118776 1531 ntBASIC11.68□□□□□ -0.54
Smarcd3Q6P9Z1 Pex2-204ENSMUST00000165309 2038 ntAPPRIS P1 TSL 5 BASIC11.68□□□□□ -0.54
Smarcd3Q6P9Z1 Gm26588-202ENSMUST00000181355 2538 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Smarcd3Q6P9Z1 Syncrip-210ENSMUST00000174391 6257 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Smarcd3Q6P9Z1 Afg3l1-201ENSMUST00000001520 4227 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Smarcd3Q6P9Z1 Tnn-202ENSMUST00000131919 3987 ntTSL 5 BASIC11.68□□□□□ -0.54
Smarcd3Q6P9Z1 Hspa4l-201ENSMUST00000108086 2744 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Smarcd3Q6P9Z1 Sorbs3-202ENSMUST00000227259 2481 ntAPPRIS ALT2 BASIC11.68□□□□□ -0.54
Smarcd3Q6P9Z1 Gm15082-201ENSMUST00000147045 1960 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Smarcd3Q6P9Z1 Ccnt1-208ENSMUST00000169707 7397 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Smarcd3Q6P9Z1 Syt7-202ENSMUST00000076968 6624 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Smarcd3Q6P9Z1 Rbm12b1-201ENSMUST00000050069 2949 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Smarcd3Q6P9Z1 Pogk-202ENSMUST00000128861 4848 ntAPPRIS P3 TSL 1 (best) BASIC11.68□□□□□ -0.54
Smarcd3Q6P9Z1 Setd1a-201ENSMUST00000047075 6487 ntAPPRIS P1 TSL 5 BASIC11.68□□□□□ -0.54
Smarcd3Q6P9Z1 Gm26677-201ENSMUST00000180553 1672 ntTSL 5 BASIC11.68□□□□□ -0.54
Smarcd3Q6P9Z1 Flrt1-201ENSMUST00000113383 5859 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Smarcd3Q6P9Z1 F7-201ENSMUST00000033820 1859 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Smarcd3Q6P9Z1 Adra1a-206ENSMUST00000225182 2337 ntBASIC11.68□□□□□ -0.54
Smarcd3Q6P9Z1 Bbs4-201ENSMUST00000026265 2518 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Smarcd3Q6P9Z1 Ccdc167-202ENSMUST00000128751 1365 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Smarcd3Q6P9Z1 AC101945.2-201ENSMUST00000227886 1377 ntBASIC11.67□□□□□ -0.54
Smarcd3Q6P9Z1 Gm43666-201ENSMUST00000197116 2989 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Smarcd3Q6P9Z1 Kcnn1-204ENSMUST00000212086 2964 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Smarcd3Q6P9Z1 Cpq-207ENSMUST00000228916 1842 ntAPPRIS P1 BASIC11.67□□□□□ -0.54
Smarcd3Q6P9Z1 Ctr9-201ENSMUST00000005749 4300 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Smarcd3Q6P9Z1 Gm32479-201ENSMUST00000204226 2739 ntTSL 2 BASIC11.67□□□□□ -0.54
Smarcd3Q6P9Z1 Patj-201ENSMUST00000030290 2495 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Smarcd3Q6P9Z1 Rita1-201ENSMUST00000031599 1573 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Smarcd3Q6P9Z1 Rara-207ENSMUST00000164748 3129 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Smarcd3Q6P9Z1 Gm8617-201ENSMUST00000118796 2222 ntBASIC11.67□□□□□ -0.54
Smarcd3Q6P9Z1 Fitm2-201ENSMUST00000109418 3967 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Smarcd3Q6P9Z1 Camta2-202ENSMUST00000100933 4383 ntAPPRIS ALT2 TSL 5 BASIC11.67□□□□□ -0.54
Smarcd3Q6P9Z1 Camta2-204ENSMUST00000108545 4377 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Smarcd3Q6P9Z1 Camta2-206ENSMUST00000120261 4398 ntTSL 5 BASIC11.67□□□□□ -0.54
Smarcd3Q6P9Z1 Plk2-201ENSMUST00000022212 2800 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Smarcd3Q6P9Z1 Cyb5rl-201ENSMUST00000030364 2360 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Smarcd3Q6P9Z1 Mlx-203ENSMUST00000107303 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Smarcd3Q6P9Z1 Ormdl1-201ENSMUST00000027266 1910 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Smarcd3Q6P9Z1 Mxd1-201ENSMUST00000001184 4666 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Smarcd3Q6P9Z1 Gm5638-201ENSMUST00000118618 1258 ntBASIC11.67□□□□□ -0.54
Smarcd3Q6P9Z1 Gm11724-201ENSMUST00000125577 472 ntTSL 2 BASIC11.67□□□□□ -0.54
Smarcd3Q6P9Z1 4930527A07Rik-201ENSMUST00000130677 559 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Smarcd3Q6P9Z1 2410080I02Rik-201ENSMUST00000142712 414 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Smarcd3Q6P9Z1 Zfp414-204ENSMUST00000166627 1211 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Smarcd3Q6P9Z1 Cpsf4l-205ENSMUST00000173655 1213 ntAPPRIS P3 TSL 1 (best) BASIC11.67□□□□□ -0.54
Smarcd3Q6P9Z1 Mpc1-201ENSMUST00000046754 920 ntAPPRIS P1 TSL 5 BASIC11.67□□□□□ -0.54
Smarcd3Q6P9Z1 Zfp414-201ENSMUST00000073570 1197 ntAPPRIS P2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Smarcd3Q6P9Z1 Gfra1-203ENSMUST00000129100 4415 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Smarcd3Q6P9Z1 Prr36-201ENSMUST00000168386 4616 ntAPPRIS P1 TSL 5 BASIC11.67□□□□□ -0.54
Smarcd3Q6P9Z1 Pggt1b-201ENSMUST00000025354 2736 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Smarcd3Q6P9Z1 Trmt1l-201ENSMUST00000065625 2749 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Smarcd3Q6P9Z1 Oit3-201ENSMUST00000009798 2717 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Smarcd3Q6P9Z1 Dock11-201ENSMUST00000033419 6665 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Smarcd3Q6P9Z1 Coq3-201ENSMUST00000029909 2651 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Smarcd3Q6P9Z1 Sgk1-204ENSMUST00000120509 3096 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Smarcd3Q6P9Z1 Pak6-202ENSMUST00000110853 3677 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Smarcd3Q6P9Z1 Klf11-201ENSMUST00000020982 4086 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Smarcd3Q6P9Z1 Slc35g3-201ENSMUST00000102586 1618 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Smarcd3Q6P9Z1 Sin3a-206ENSMUST00000168177 5086 ntAPPRIS ALT1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Smarcd3Q6P9Z1 Tcf25-203ENSMUST00000211932 5002 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Smarcd3Q6P9Z1 Cry2-201ENSMUST00000090559 3976 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Smarcd3Q6P9Z1 Gm44292-201ENSMUST00000205194 2364 ntBASIC11.67□□□□□ -0.54
Smarcd3Q6P9Z1 Rph3al-204ENSMUST00000121287 2199 ntAPPRIS P1 TSL 5 BASIC11.67□□□□□ -0.54
Smarcd3Q6P9Z1 Cdk7-201ENSMUST00000091299 1988 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Smarcd3Q6P9Z1 Jak1-201ENSMUST00000102781 4906 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Smarcd3Q6P9Z1 Pex2-206ENSMUST00000195855 1587 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Smarcd3Q6P9Z1 Wfdc1-201ENSMUST00000024107 1371 ntAPPRIS P2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Smarcd3Q6P9Z1 Uap1l1-201ENSMUST00000102925 3349 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Smarcd3Q6P9Z1 Gm14123-201ENSMUST00000156345 2658 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Smarcd3Q6P9Z1 Arhgap25-202ENSMUST00000101197 2493 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Smarcd3Q6P9Z1 Foxk1-201ENSMUST00000072837 7439 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Smarcd3Q6P9Z1 1110028F18Rik-201ENSMUST00000183365 1341 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Smarcd3Q6P9Z1 Lgr5-201ENSMUST00000020350 4714 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Smarcd3Q6P9Z1 Hdac5-202ENSMUST00000107150 3759 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Smarcd3Q6P9Z1 Sars-202ENSMUST00000102625 1866 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Smarcd3Q6P9Z1 Cog6-201ENSMUST00000036665 3182 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Smarcd3Q6P9Z1 Acvrl1-205ENSMUST00000120754 3506 ntAPPRIS P1 TSL 5 BASIC11.66□□□□□ -0.54
Smarcd3Q6P9Z1 Chchd10-203ENSMUST00000219839 1488 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Smarcd3Q6P9Z1 Nrsn2-201ENSMUST00000079278 1455 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Smarcd3Q6P9Z1 Pkm-202ENSMUST00000163694 2041 ntAPPRIS ALT1 TSL 5 BASIC11.66□□□□□ -0.54
Smarcd3Q6P9Z1 Nxph1-201ENSMUST00000060369 2578 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Smarcd3Q6P9Z1 Gfpt1-202ENSMUST00000113655 1255 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Smarcd3Q6P9Z1 Gm6152-201ENSMUST00000151704 340 ntBASIC11.66□□□□□ -0.54
Smarcd3Q6P9Z1 Gm6460-202ENSMUST00000163787 821 ntAPPRIS P2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Smarcd3Q6P9Z1 Pfdn5-205ENSMUST00000166658 1062 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Smarcd3Q6P9Z1 Gm8879-201ENSMUST00000170260 1125 ntAPPRIS P1 TSL 5 BASIC11.66□□□□□ -0.54
Smarcd3Q6P9Z1 4933402N22Rik-202ENSMUST00000170301 1092 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Smarcd3Q6P9Z1 Ly6g6e-203ENSMUST00000172678 750 ntAPPRIS P2 TSL 3 BASIC11.66□□□□□ -0.54
Smarcd3Q6P9Z1 4930594M17Rik-201ENSMUST00000181204 1033 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Smarcd3Q6P9Z1 Spag7-201ENSMUST00000018431 1159 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Smarcd3Q6P9Z1 Gm7063-201ENSMUST00000186840 981 ntBASIC11.66□□□□□ -0.54
Smarcd3Q6P9Z1 Kansl3-206ENSMUST00000187628 336 ntTSL 5 BASIC11.66□□□□□ -0.54
Smarcd3Q6P9Z1 Platr12-202ENSMUST00000189722 549 ntTSL 3 BASIC11.66□□□□□ -0.54
Smarcd3Q6P9Z1 AC156504.2-201ENSMUST00000213800 711 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Smarcd3Q6P9Z1 CT025535.1-201ENSMUST00000227172 491 ntBASIC11.66□□□□□ -0.54
Smarcd3Q6P9Z1 Scn8a-208ENSMUST00000200963 5814 ntTSL 5 BASIC11.66□□□□□ -0.54
Smarcd3Q6P9Z1 Zfp819-203ENSMUST00000120935 2156 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Smarcd3Q6P9Z1 Cplx1-201ENSMUST00000046892 2189 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Smarcd3Q6P9Z1 Mob1a-201ENSMUST00000038658 4119 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Smarcd3Q6P9Z1 Gm37391-201ENSMUST00000194891 2318 ntBASIC11.66□□□□□ -0.54
Retrieved 100 of 76,532 protein–RNA pairs in 44.7 ms