Protein–RNA interactions for Protein: Q6DIC0

Smarca2, Probable global transcription activator SNF2L2, mousemouse

Predictions only

Length 1,577 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarca2Q6DIC0 Snhg17-205ENSMUST00000151331 529 ntTSL 2 BASIC21.74■■□□□ 1.07
Smarca2Q6DIC0 Gm22442-201ENSMUST00000157256 144 ntBASIC21.74■■□□□ 1.07
Smarca2Q6DIC0 Ighv6-7-201ENSMUST00000193397 357 ntAPPRIS P1 BASIC21.74■■□□□ 1.07
Smarca2Q6DIC0 Gm11149-203ENSMUST00000215465 805 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
Smarca2Q6DIC0 Prss51-201ENSMUST00000063785 961 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
Smarca2Q6DIC0 1700029P11Rik-201ENSMUST00000074608 1024 ntAPPRIS P1 BASIC21.74■■□□□ 1.07
Smarca2Q6DIC0 Clec4b1-202ENSMUST00000078559 748 ntAPPRIS ALT2 TSL 1 (best) BASIC21.74■■□□□ 1.07
Smarca2Q6DIC0 Gm10334-201ENSMUST00000095999 876 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Smarca2Q6DIC0 Spata18-203ENSMUST00000113548 1623 ntAPPRIS ALT2 TSL 5 BASIC21.74■■□□□ 1.07
Smarca2Q6DIC0 BC030500-201ENSMUST00000062978 1605 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Smarca2Q6DIC0 Atrn-201ENSMUST00000028781 8745 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Smarca2Q6DIC0 Trim37-201ENSMUST00000041282 5632 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Smarca2Q6DIC0 Fbxo21-201ENSMUST00000035579 3883 ntAPPRIS ALT2 TSL 1 (best) BASIC21.73■■□□□ 1.07
Smarca2Q6DIC0 Apba1-201ENSMUST00000025830 6632 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Smarca2Q6DIC0 Apon-202ENSMUST00000218722 1747 ntAPPRIS P1 BASIC21.73■■□□□ 1.07
Smarca2Q6DIC0 Trpv4-204ENSMUST00000112222 2475 ntTSL 5 BASIC21.73■■□□□ 1.07
Smarca2Q6DIC0 Gm18782-201ENSMUST00000209023 1399 ntBASIC21.73■■□□□ 1.07
Smarca2Q6DIC0 Traf3-203ENSMUST00000117269 6972 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
Smarca2Q6DIC0 C130050O18Rik-202ENSMUST00000163940 1618 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Smarca2Q6DIC0 Ccdc88b-201ENSMUST00000113440 4959 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Smarca2Q6DIC0 Ighv2-6-8-201ENSMUST00000103455 342 ntAPPRIS ALT2 BASIC21.73■■□□□ 1.07
Smarca2Q6DIC0 Gm13328-201ENSMUST00000120816 1020 ntBASIC21.73■■□□□ 1.07
Smarca2Q6DIC0 4930535L15Rik-201ENSMUST00000175891 536 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
Smarca2Q6DIC0 Mir6923-201ENSMUST00000184592 72 ntBASIC21.73■■□□□ 1.07
Smarca2Q6DIC0 Gm27241-202ENSMUST00000185013 570 ntTSL 2 BASIC21.73■■□□□ 1.07
Smarca2Q6DIC0 Gm45570-201ENSMUST00000211137 495 ntTSL 5 BASIC21.73■■□□□ 1.07
Smarca2Q6DIC0 AC165260.2-203ENSMUST00000224237 336 ntBASIC21.73■■□□□ 1.07
Smarca2Q6DIC0 Odf3-201ENSMUST00000026555 1128 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Smarca2Q6DIC0 Phxr2-201ENSMUST00000060761 1159 ntAPPRIS P1 BASIC21.73■■□□□ 1.07
Smarca2Q6DIC0 Pank1-201ENSMUST00000036584 3460 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
Smarca2Q6DIC0 Folr1-203ENSMUST00000106983 1307 ntAPPRIS P1 TSL 5 BASIC21.73■■□□□ 1.07
Smarca2Q6DIC0 Gm4735-201ENSMUST00000138679 1302 ntBASIC21.73■■□□□ 1.07
Smarca2Q6DIC0 Gm5855-201ENSMUST00000200240 1305 ntBASIC21.73■■□□□ 1.07
Smarca2Q6DIC0 Gm20125-205ENSMUST00000208005 1979 ntTSL 5 BASIC21.72■■□□□ 1.07
Smarca2Q6DIC0 Pcdh10-204ENSMUST00000193252 4638 ntAPPRIS ALT2 BASIC21.72■■□□□ 1.07
Smarca2Q6DIC0 Adal-205ENSMUST00000119031 2477 ntAPPRIS P1 TSL 5 BASIC21.72■■□□□ 1.07
Smarca2Q6DIC0 Rhobtb2-201ENSMUST00000022665 5322 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Smarca2Q6DIC0 Itsn1-205ENSMUST00000113996 5147 ntTSL 5 BASIC21.72■■□□□ 1.07
Smarca2Q6DIC0 Spag1-202ENSMUST00000171205 3219 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Smarca2Q6DIC0 Gm11663-201ENSMUST00000117888 290 ntBASIC21.72■■□□□ 1.07
Smarca2Q6DIC0 Zfp637-210ENSMUST00000164472 1098 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Smarca2Q6DIC0 Gm4862-201ENSMUST00000170405 438 ntBASIC21.72■■□□□ 1.07
Smarca2Q6DIC0 Gm31166-202ENSMUST00000210638 1268 ntTSL 3 BASIC21.72■■□□□ 1.07
Smarca2Q6DIC0 AC027700.1-201ENSMUST00000213965 370 ntTSL 5 BASIC21.72■■□□□ 1.07
Smarca2Q6DIC0 Mcee-201ENSMUST00000037205 828 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Smarca2Q6DIC0 n-R5s211-201ENSMUST00000093689 119 ntBASIC21.72■■□□□ 1.07
Smarca2Q6DIC0 Ripk3-202ENSMUST00000168716 1964 ntTSL 5 BASIC21.72■■□□□ 1.07
Smarca2Q6DIC0 Prkcb-202ENSMUST00000064989 2911 ntAPPRIS P3 TSL 1 (best) BASIC21.72■■□□□ 1.07
Smarca2Q6DIC0 Col17a1-201ENSMUST00000026045 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC21.72■■□□□ 1.07
Smarca2Q6DIC0 Clca2-203ENSMUST00000198993 2774 ntAPPRIS ALT2 TSL 1 (best) BASIC21.72■■□□□ 1.07
Smarca2Q6DIC0 Ubap2l-204ENSMUST00000195995 3516 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
Smarca2Q6DIC0 Gm45253-201ENSMUST00000210694 2076 ntTSL 5 BASIC21.72■■□□□ 1.07
Smarca2Q6DIC0 Sec61g-203ENSMUST00000109643 1862 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Smarca2Q6DIC0 Tdg-208ENSMUST00000151390 3502 ntAPPRIS P3 TSL 1 (best) BASIC21.71■■□□□ 1.07
Smarca2Q6DIC0 Gm26593-201ENSMUST00000181848 1970 ntTSL 5 BASIC21.71■■□□□ 1.07
Smarca2Q6DIC0 Itfg2-201ENSMUST00000001559 2320 ntAPPRIS P2 TSL 1 (best) BASIC21.71■■□□□ 1.07
Smarca2Q6DIC0 Kifc1-204ENSMUST00000173492 2350 ntAPPRIS P2 TSL 1 (best) BASIC21.71■■□□□ 1.07
Smarca2Q6DIC0 Gm43677-201ENSMUST00000198098 2378 ntBASIC21.71■■□□□ 1.07
Smarca2Q6DIC0 Gm15004-201ENSMUST00000119192 630 ntBASIC21.71■■□□□ 1.07
Smarca2Q6DIC0 Gm8737-201ENSMUST00000122208 642 ntBASIC21.71■■□□□ 1.07
Smarca2Q6DIC0 Aamdc-203ENSMUST00000124552 618 ntTSL 3 BASIC21.71■■□□□ 1.07
Smarca2Q6DIC0 Gm6408-201ENSMUST00000179032 1171 ntAPPRIS P1 TSL 5 BASIC21.71■■□□□ 1.07
Smarca2Q6DIC0 Gm43610-201ENSMUST00000199117 365 ntBASIC21.71■■□□□ 1.07
Smarca2Q6DIC0 AC134860.1-201ENSMUST00000224867 660 ntBASIC21.71■■□□□ 1.07
Smarca2Q6DIC0 AC121960.1-201ENSMUST00000227982 564 ntBASIC21.71■■□□□ 1.07
Smarca2Q6DIC0 Cfap161-201ENSMUST00000011298 1335 ntAPPRIS P2 TSL 1 (best) BASIC21.71■■□□□ 1.07
Smarca2Q6DIC0 Hid1-201ENSMUST00000044152 3236 ntAPPRIS ALT1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Smarca2Q6DIC0 Rtbdn-204ENSMUST00000152378 2322 ntAPPRIS ALT2 TSL 1 (best) BASIC21.71■■□□□ 1.07
Smarca2Q6DIC0 Lrrc30-201ENSMUST00000097290 1759 ntAPPRIS P1 BASIC21.71■■□□□ 1.07
Smarca2Q6DIC0 Gm14866-201ENSMUST00000149206 2118 ntTSL 2 BASIC21.71■■□□□ 1.07
Smarca2Q6DIC0 Ctbs-202ENSMUST00000061937 2892 ntAPPRIS ALT2 TSL 1 (best) BASIC21.71■■□□□ 1.07
Smarca2Q6DIC0 Mpp4-204ENSMUST00000186477 1885 ntAPPRIS ALT2 TSL 5 BASIC21.71■■□□□ 1.07
Smarca2Q6DIC0 Irf9-205ENSMUST00000138037 2343 ntAPPRIS ALT2 TSL 1 (best) BASIC21.7■■□□□ 1.06
Smarca2Q6DIC0 Akr1b10-202ENSMUST00000115051 1022 ntTSL 5 BASIC21.7■■□□□ 1.06
Smarca2Q6DIC0 Smim1-204ENSMUST00000130175 477 ntAPPRIS P1 TSL 5 BASIC21.7■■□□□ 1.06
Smarca2Q6DIC0 Gm15744-201ENSMUST00000161734 213 ntBASIC21.7■■□□□ 1.06
Smarca2Q6DIC0 1700063K16Rik-201ENSMUST00000190306 369 ntBASIC21.7■■□□□ 1.06
Smarca2Q6DIC0 4930413E15Rik-201ENSMUST00000202500 1290 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
Smarca2Q6DIC0 Gm44882-201ENSMUST00000205702 802 ntBASIC21.7■■□□□ 1.06
Smarca2Q6DIC0 Gm2875-201ENSMUST00000211333 360 ntBASIC21.7■■□□□ 1.06
Smarca2Q6DIC0 Gm45781-201ENSMUST00000212860 539 ntTSL 5 BASIC21.7■■□□□ 1.06
Smarca2Q6DIC0 Cyth1-201ENSMUST00000017276 3135 ntAPPRIS ALT1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Smarca2Q6DIC0 Fbxo42-201ENSMUST00000030757 5934 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Smarca2Q6DIC0 Il21r-202ENSMUST00000206103 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC21.7■■□□□ 1.06
Smarca2Q6DIC0 Borcs7-201ENSMUST00000074912 2176 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Smarca2Q6DIC0 Pdp1-205ENSMUST00000108301 2635 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
Smarca2Q6DIC0 Ash2l-210ENSMUST00000166078 2234 ntAPPRIS ALT2 TSL 5 BASIC21.7■■□□□ 1.06
Smarca2Q6DIC0 Npnt-203ENSMUST00000093971 1830 ntAPPRIS ALT2 TSL 1 (best) BASIC21.7■■□□□ 1.06
Smarca2Q6DIC0 Agt-201ENSMUST00000063278 1891 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Smarca2Q6DIC0 Zfp64-203ENSMUST00000109162 2848 ntAPPRIS P1 TSL 2 BASIC21.7■■□□□ 1.06
Smarca2Q6DIC0 Arsg-202ENSMUST00000106696 1508 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
Smarca2Q6DIC0 Glcci1-201ENSMUST00000064285 6200 ntAPPRIS P3 TSL 1 (best) BASIC21.7■■□□□ 1.06
Smarca2Q6DIC0 Rgl1-201ENSMUST00000027760 4572 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
Smarca2Q6DIC0 Efnb1-201ENSMUST00000052839 3258 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Smarca2Q6DIC0 Gm25076-201ENSMUST00000104098 132 ntBASIC21.7■■□□□ 1.06
Smarca2Q6DIC0 Gm15566-201ENSMUST00000121130 590 ntBASIC21.7■■□□□ 1.06
Smarca2Q6DIC0 Wdr53-204ENSMUST00000178573 1153 ntAPPRIS P1 TSL 5 BASIC21.7■■□□□ 1.06
Smarca2Q6DIC0 9330179D12Rik-201ENSMUST00000180569 1105 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
Smarca2Q6DIC0 1700088E04Rik-210ENSMUST00000190509 871 ntTSL 5 BASIC21.7■■□□□ 1.06
Smarca2Q6DIC0 Mt1-202ENSMUST00000211807 1085 ntBASIC21.7■■□□□ 1.06
Retrieved 100 of 76,532 protein–RNA pairs in 39 ms