Protein–RNA interactions for Protein: Q64739

Col11a2, Collagen alpha-2(XI) chain, mousemouse

Predictions only

Length 1,736 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col11a2Q64739 Gm9924-202ENSMUST00000192760 2311 ntBASIC15.05■□□□□ -0
Col11a2Q64739 Rad51c-201ENSMUST00000007790 1632 ntTSL 1 (best) BASIC15.05■□□□□ -0
Col11a2Q64739 Sema6d-201ENSMUST00000051419 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ -0
Col11a2Q64739 Hnrnpm-202ENSMUST00000114385 2550 ntTSL 2 BASIC15.05■□□□□ -0
Col11a2Q64739 Clic3-201ENSMUST00000102918 791 ntAPPRIS ALT1 TSL 3 BASIC15.05■□□□□ -0
Col11a2Q64739 Ighv7-2-201ENSMUST00000103462 354 ntAPPRIS ALT2 BASIC15.05■□□□□ -0
Col11a2Q64739 Ccdc163-202ENSMUST00000106462 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ -0
Col11a2Q64739 4930504D19Rik-201ENSMUST00000204799 349 ntTSL 1 (best) BASIC15.05■□□□□ -0
Col11a2Q64739 Gm46204-201ENSMUST00000219800 411 ntTSL 3 BASIC15.05■□□□□ -0
Col11a2Q64739 CT025553.1-201ENSMUST00000226292 299 ntBASIC15.05■□□□□ -0
Col11a2Q64739 H1foo-201ENSMUST00000037831 1113 ntAPPRIS P3 TSL 1 (best) BASIC15.05■□□□□ -0
Col11a2Q64739 Hils1-201ENSMUST00000038928 864 ntAPPRIS P1 BASIC15.05■□□□□ -0
Col11a2Q64739 Snrpg-201ENSMUST00000089558 1055 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Col11a2Q64739 n-R5s211-201ENSMUST00000093689 119 ntBASIC15.05■□□□□ -0
Col11a2Q64739 Gm5544-201ENSMUST00000098828 891 ntTSL 1 (best) BASIC15.05■□□□□ -0
Col11a2Q64739 Tmc4-202ENSMUST00000121743 2204 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ -0
Col11a2Q64739 Mink1-202ENSMUST00000072873 4610 ntAPPRIS ALT2 TSL 5 BASIC15.05■□□□□ -0
Col11a2Q64739 Arsg-202ENSMUST00000106696 1508 ntTSL 1 (best) BASIC15.05■□□□□ -0
Col11a2Q64739 Eif4g3-204ENSMUST00000105830 3252 ntTSL 1 (best) BASIC15.05■□□□□ -0
Col11a2Q64739 Klhdc8b-207ENSMUST00000193286 2956 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Col11a2Q64739 Lmntd2-201ENSMUST00000026573 2095 ntAPPRIS P2 TSL 1 (best) BASIC15.05■□□□□ -0
Col11a2Q64739 Etnk1-201ENSMUST00000032413 6433 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Col11a2Q64739 Spop-202ENSMUST00000107724 2881 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Col11a2Q64739 Gnai1-201ENSMUST00000074694 3135 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Col11a2Q64739 Krt26-201ENSMUST00000100482 2471 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Col11a2Q64739 Col18a1-202ENSMUST00000081654 5063 ntTSL 1 (best) BASIC15.04■□□□□ -0
Col11a2Q64739 Npnt-206ENSMUST00000117811 4532 ntAPPRIS ALT2 TSL 5 BASIC15.04■□□□□ -0
Col11a2Q64739 Aurkc-203ENSMUST00000207711 1320 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
Col11a2Q64739 Etnk2-201ENSMUST00000129213 2074 ntAPPRIS ALT2 TSL 2 BASIC15.04■□□□□ -0
Col11a2Q64739 Rab11a-208ENSMUST00000172298 2336 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Col11a2Q64739 Cenpx-203ENSMUST00000106154 873 ntTSL 2 BASIC15.04■□□□□ -0
Col11a2Q64739 Gm14219-201ENSMUST00000120414 288 ntBASIC15.04■□□□□ -0
Col11a2Q64739 Gm14247-201ENSMUST00000120950 237 ntBASIC15.04■□□□□ -0
Col11a2Q64739 Gm3017-201ENSMUST00000203603 1126 ntBASIC15.04■□□□□ -0
Col11a2Q64739 Gm18059-201ENSMUST00000208073 580 ntBASIC15.04■□□□□ -0
Col11a2Q64739 Gm11149-203ENSMUST00000215465 805 ntTSL 1 (best) BASIC15.04■□□□□ -0
Col11a2Q64739 AC159376.1-201ENSMUST00000218504 630 ntBASIC15.04■□□□□ -0
Col11a2Q64739 Gm6722-201ENSMUST00000221586 390 ntBASIC15.04■□□□□ -0
Col11a2Q64739 Gm46336-201ENSMUST00000221894 279 ntTSL 5 BASIC15.04■□□□□ -0
Col11a2Q64739 AC124433.1-201ENSMUST00000224483 1063 ntBASIC15.04■□□□□ -0
Col11a2Q64739 Tff2-201ENSMUST00000024826 584 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Col11a2Q64739 Ldlrad3-201ENSMUST00000058790 3833 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Col11a2Q64739 Hist1h1b-201ENSMUST00000080511 743 ntAPPRIS P1 BASIC15.04■□□□□ -0
Col11a2Q64739 Zc3hc1-203ENSMUST00000115184 1504 ntTSL 5 BASIC15.04■□□□□ -0
Col11a2Q64739 Ntm-203ENSMUST00000115237 2039 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Col11a2Q64739 Pla2g5-204ENSMUST00000102513 2289 ntAPPRIS P1 TSL 5 BASIC15.04■□□□□ -0
Col11a2Q64739 Sept10-201ENSMUST00000165971 2532 ntAPPRIS P2 TSL 1 (best) BASIC15.04■□□□□ -0
Col11a2Q64739 Spata7-203ENSMUST00000101146 1913 ntTSL 1 (best) BASIC15.04■□□□□ -0
Col11a2Q64739 Scg3-201ENSMUST00000034699 2384 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Col11a2Q64739 March8-201ENSMUST00000079012 4450 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Col11a2Q64739 Txnrd3-201ENSMUST00000000828 2836 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Col11a2Q64739 Gpc2-205ENSMUST00000161827 2586 ntAPPRIS P2 TSL 1 (best) BASIC15.04■□□□□ -0
Col11a2Q64739 Tmem198b-201ENSMUST00000051011 2335 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Col11a2Q64739 Mex3a-201ENSMUST00000172699 5778 ntAPPRIS P1 TSL 2 BASIC15.04■□□□□ -0
Col11a2Q64739 Pdcl3-201ENSMUST00000027247 3914 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Col11a2Q64739 Fam8a1-201ENSMUST00000099547 3664 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Col11a2Q64739 Fubp1-206ENSMUST00000196739 2526 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
Col11a2Q64739 5530401A14Rik-201ENSMUST00000021044 1836 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Col11a2Q64739 Lypd6-201ENSMUST00000053208 3620 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Col11a2Q64739 Gm6210-201ENSMUST00000204734 1942 ntBASIC15.03■□□□□ -0
Col11a2Q64739 Zc3h12a-201ENSMUST00000036188 2755 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Col11a2Q64739 Tcea3-201ENSMUST00000102533 1251 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Col11a2Q64739 Krtap4-9-201ENSMUST00000105059 1059 ntAPPRIS P1 BASIC15.03■□□□□ -0
Col11a2Q64739 Rbm3-205ENSMUST00000115619 969 ntAPPRIS ALT1 TSL 3 BASIC15.03■□□□□ -0
Col11a2Q64739 Ggt1-208ENSMUST00000134503 2140 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Col11a2Q64739 2610316D01Rik-201ENSMUST00000181047 924 ntTSL 1 (best) BASIC15.03■□□□□ -0
Col11a2Q64739 Gm29410-201ENSMUST00000188383 694 ntBASIC15.03■□□□□ -0
Col11a2Q64739 AC115122.1-201ENSMUST00000224850 1040 ntBASIC15.03■□□□□ -0
Col11a2Q64739 Mcee-201ENSMUST00000037205 828 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Col11a2Q64739 Krtap6-2-201ENSMUST00000082065 786 ntAPPRIS P1 BASIC15.03■□□□□ -0
Col11a2Q64739 Eri1-201ENSMUST00000033927 5079 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Col11a2Q64739 Gm12968-201ENSMUST00000138291 1454 ntTSL 1 (best) BASIC15.03■□□□□ -0
Col11a2Q64739 Rbm39-201ENSMUST00000029149 2711 ntAPPRIS ALT1 TSL 1 (best) BASIC15.03■□□□□ -0
Col11a2Q64739 Klc2-201ENSMUST00000025798 2940 ntTSL 5 BASIC15.03■□□□□ -0
Col11a2Q64739 Stox2-208ENSMUST00000211737 4573 ntTSL 1 (best) BASIC15.03■□□□□ -0
Col11a2Q64739 Smyd4-201ENSMUST00000044530 3517 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Col11a2Q64739 Gm42840-201ENSMUST00000200303 2251 ntBASIC15.03■□□□□ -0
Col11a2Q64739 Fcrls-201ENSMUST00000090986 2273 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Col11a2Q64739 Igsf8-204ENSMUST00000139528 2866 ntTSL 2 BASIC15.03■□□□□ -0
Col11a2Q64739 Gm6034-201ENSMUST00000097331 1633 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Col11a2Q64739 Mapk1-202ENSMUST00000069107 5099 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Col11a2Q64739 Rgl1-201ENSMUST00000027760 4572 ntTSL 1 (best) BASIC15.03■□□□□ -0
Col11a2Q64739 Zmynd11-206ENSMUST00000110637 3770 ntTSL 5 BASIC15.03■□□□□ -0
Col11a2Q64739 Josd1-201ENSMUST00000023061 3394 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Col11a2Q64739 Ppt1-201ENSMUST00000030412 2381 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Col11a2Q64739 Slc30a3-206ENSMUST00000202740 1989 ntTSL 5 BASIC15.03■□□□□ -0
Col11a2Q64739 Gm996-203ENSMUST00000188161 2925 ntAPPRIS P1 BASIC15.03■□□□□ -0
Col11a2Q64739 Bcor-202ENSMUST00000065143 6839 ntAPPRIS P4 TSL 1 (best) BASIC15.03■□□□□ -0
Col11a2Q64739 Nrf1-211ENSMUST00000115212 3584 ntTSL 1 (best) BASIC15.03■□□□□ -0
Col11a2Q64739 Snhg18-201ENSMUST00000181536 1486 ntTSL 1 (best) BASIC15.03■□□□□ -0
Col11a2Q64739 4930588G17Rik-201ENSMUST00000208075 1474 ntTSL 1 (best) BASIC15.03■□□□□ -0
Col11a2Q64739 Hrct1-201ENSMUST00000095109 1452 ntAPPRIS P1 BASIC15.03■□□□□ -0
Col11a2Q64739 Arhgef2-208ENSMUST00000175911 2030 ntAPPRIS ALT2 TSL 5 BASIC15.03■□□□□ -0
Col11a2Q64739 Metap2-206ENSMUST00000180840 2551 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Col11a2Q64739 Ell2-201ENSMUST00000001583 4382 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Col11a2Q64739 A230006K03Rik-201ENSMUST00000107533 977 ntTSL 5 BASIC15.03■□□□□ -0
Col11a2Q64739 Gm22877-201ENSMUST00000175451 105 ntBASIC15.03■□□□□ -0
Col11a2Q64739 Ly6c1-202ENSMUST00000179762 838 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
Col11a2Q64739 1700081H04Rik-201ENSMUST00000190550 1128 ntTSL 1 (best) BASIC15.03■□□□□ -0
Col11a2Q64739 Gm44421-201ENSMUST00000205064 1221 ntBASIC15.03■□□□□ -0
Retrieved 100 of 76,532 protein–RNA pairs in 56.9 ms