Protein–RNA interactions for Protein: Q64519

Sdc3, Syndecan-3, mousemouse

Predictions only

Length 442 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sdc3Q64519 Gm37042-201ENSMUST00000193816 581 ntBASIC12.28□□□□□ -0.44
Sdc3Q64519 Gm43755-201ENSMUST00000200001 408 ntTSL 5 BASIC12.28□□□□□ -0.44
Sdc3Q64519 Gm19710-201ENSMUST00000200257 640 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Sdc3Q64519 Il15-202ENSMUST00000209363 1251 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Sdc3Q64519 AC153845.2-201ENSMUST00000217535 673 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Sdc3Q64519 Gm45930-201ENSMUST00000221330 292 ntBASIC12.28□□□□□ -0.44
Sdc3Q64519 AC133598.1-201ENSMUST00000224327 660 ntBASIC12.28□□□□□ -0.44
Sdc3Q64519 Fgl1-201ENSMUST00000034003 1120 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Sdc3Q64519 Runx1t1-204ENSMUST00000105566 6090 ntAPPRIS ALT1 TSL 5 BASIC12.28□□□□□ -0.44
Sdc3Q64519 Slc29a1-203ENSMUST00000097317 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Sdc3Q64519 Mest-211ENSMUST00000163949 2561 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
Sdc3Q64519 Kif1c-202ENSMUST00000094499 5168 ntAPPRIS P2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Sdc3Q64519 Nelfcd-202ENSMUST00000109075 2279 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Sdc3Q64519 Kcnk2-202ENSMUST00000110920 3572 ntAPPRIS ALT1 TSL 5 BASIC12.28□□□□□ -0.44
Sdc3Q64519 Acad12-202ENSMUST00000111776 2269 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Sdc3Q64519 Snx13-201ENSMUST00000048519 6231 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Sdc3Q64519 Mlkl-202ENSMUST00000120432 1976 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
Sdc3Q64519 Tfe3-203ENSMUST00000101695 2989 ntTSL 5 BASIC12.28□□□□□ -0.44
Sdc3Q64519 Smarca4-204ENSMUST00000174008 5405 ntAPPRIS ALT1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Sdc3Q64519 Snap23-203ENSMUST00000116437 2730 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Sdc3Q64519 AC101945.2-201ENSMUST00000227886 1377 ntBASIC12.28□□□□□ -0.44
Sdc3Q64519 Tcf4-204ENSMUST00000114978 2437 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Sdc3Q64519 Otx1-201ENSMUST00000006071 2789 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Sdc3Q64519 Podn-201ENSMUST00000044248 2885 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
Sdc3Q64519 Ildr1-202ENSMUST00000089618 2850 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Sdc3Q64519 Eif4e2-206ENSMUST00000113233 1807 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Sdc3Q64519 Ret-201ENSMUST00000032201 5456 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.44
Sdc3Q64519 Pdss2-202ENSMUST00000159139 1467 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
Sdc3Q64519 Rfx7-203ENSMUST00000183372 1457 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
Sdc3Q64519 Acot7-202ENSMUST00000075363 1457 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.44
Sdc3Q64519 Gm10544-201ENSMUST00000180516 2239 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
Sdc3Q64519 Gm26678-201ENSMUST00000181057 3025 ntTSL 5 BASIC12.27□□□□□ -0.44
Sdc3Q64519 Fgfr3-209ENSMUST00000164207 4150 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.44
Sdc3Q64519 H2-T22-201ENSMUST00000058801 1534 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.44
Sdc3Q64519 Dmbx1-201ENSMUST00000064806 5799 ntAPPRIS P2 TSL 1 (best) BASIC12.27□□□□□ -0.44
Sdc3Q64519 2310035C23Rik-201ENSMUST00000039173 4328 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.44
Sdc3Q64519 Tmem132e-202ENSMUST00000092852 4105 ntAPPRIS ALT2 TSL 2 BASIC12.27□□□□□ -0.45
Sdc3Q64519 Gm16124-201ENSMUST00000146938 516 ntTSL 2 BASIC12.27□□□□□ -0.45
Sdc3Q64519 Pced1c-ps-201ENSMUST00000187740 751 ntBASIC12.27□□□□□ -0.45
Sdc3Q64519 Tmem108-206ENSMUST00000215136 724 ntTSL 3 BASIC12.27□□□□□ -0.45
Sdc3Q64519 AC135669.1-202ENSMUST00000216742 540 ntBASIC12.27□□□□□ -0.45
Sdc3Q64519 Mrto4-201ENSMUST00000030513 930 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.45
Sdc3Q64519 9430041J12Rik-201ENSMUST00000050989 534 ntBASIC12.27□□□□□ -0.45
Sdc3Q64519 n-R5s195-201ENSMUST00000082891 119 ntBASIC12.27□□□□□ -0.45
Sdc3Q64519 Cyp2a4-201ENSMUST00000098657 1738 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Sdc3Q64519 Stx4a-202ENSMUST00000121705 1316 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Sdc3Q64519 Esyt3-201ENSMUST00000042158 4483 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Sdc3Q64519 Psmd13-208ENSMUST00000163610 1382 ntTSL 5 BASIC12.27□□□□□ -0.45
Sdc3Q64519 Urgcp-203ENSMUST00000118076 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Sdc3Q64519 Gm2670-201ENSMUST00000180668 2804 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Sdc3Q64519 Rccd1-201ENSMUST00000047362 3336 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Sdc3Q64519 Hnrnpf-210ENSMUST00000180341 1922 ntAPPRIS P1 BASIC12.27□□□□□ -0.45
Sdc3Q64519 CT009713.10-201ENSMUST00000225013 1986 ntBASIC12.27□□□□□ -0.45
Sdc3Q64519 Plekha2-204ENSMUST00000128715 3463 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Sdc3Q64519 Alx4-202ENSMUST00000111254 7056 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Sdc3Q64519 Slc25a22-223ENSMUST00000201710 2565 ntAPPRIS P1 TSL 5 BASIC12.26□□□□□ -0.45
Sdc3Q64519 Eif4enif1-213ENSMUST00000179770 3676 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Sdc3Q64519 Dcaf7-201ENSMUST00000058438 5750 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Sdc3Q64519 Vsir-203ENSMUST00000105460 4843 ntAPPRIS ALT1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Sdc3Q64519 Vsir-201ENSMUST00000020301 4846 ntAPPRIS P3 TSL 1 (best) BASIC12.26□□□□□ -0.45
Sdc3Q64519 Eya1-201ENSMUST00000027066 4347 ntAPPRIS P1 TSL 5 BASIC12.26□□□□□ -0.45
Sdc3Q64519 Sv2c-203ENSMUST00000182289 2197 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Sdc3Q64519 Slc34a3-201ENSMUST00000006638 2183 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Sdc3Q64519 Tmem63b-201ENSMUST00000113523 3284 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Sdc3Q64519 Pde4d-220ENSMUST00000177907 2244 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Sdc3Q64519 Phkg1-201ENSMUST00000026617 2374 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Sdc3Q64519 Nup88-203ENSMUST00000108531 2453 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Sdc3Q64519 Myo1d-202ENSMUST00000070997 3106 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Sdc3Q64519 Gm6023-201ENSMUST00000118217 606 ntBASIC12.26□□□□□ -0.45
Sdc3Q64519 Gm11637-201ENSMUST00000120601 592 ntBASIC12.26□□□□□ -0.45
Sdc3Q64519 1700030C14Rik-201ENSMUST00000139912 756 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Sdc3Q64519 Hoxb5os-202ENSMUST00000150698 596 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Sdc3Q64519 Gm12349-201ENSMUST00000153030 657 ntTSL 3 BASIC12.26□□□□□ -0.45
Sdc3Q64519 Prr13-204ENSMUST00000164957 1055 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Sdc3Q64519 Gm27501-201ENSMUST00000183599 107 ntBASIC12.26□□□□□ -0.45
Sdc3Q64519 Mir7221-201ENSMUST00000184009 72 ntBASIC12.26□□□□□ -0.45
Sdc3Q64519 Mir8109-201ENSMUST00000184375 117 ntBASIC12.26□□□□□ -0.45
Sdc3Q64519 Gm43118-201ENSMUST00000199149 775 ntBASIC12.26□□□□□ -0.45
Sdc3Q64519 Gm4768-201ENSMUST00000206199 686 ntBASIC12.26□□□□□ -0.45
Sdc3Q64519 Ceacam1-209ENSMUST00000206687 1061 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Sdc3Q64519 Gm10608-202ENSMUST00000213924 676 ntBASIC12.26□□□□□ -0.45
Sdc3Q64519 AC160029.2-201ENSMUST00000218285 548 ntTSL 3 BASIC12.26□□□□□ -0.45
Sdc3Q64519 AC154276.1-201ENSMUST00000228874 1299 ntBASIC12.26□□□□□ -0.45
Sdc3Q64519 Rpl18a-201ENSMUST00000054220 1260 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Sdc3Q64519 Cdc26-201ENSMUST00000084525 819 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Sdc3Q64519 Gm15459-201ENSMUST00000117405 1941 ntBASIC12.26□□□□□ -0.45
Sdc3Q64519 Gm8355-201ENSMUST00000177767 1941 ntBASIC12.26□□□□□ -0.45
Sdc3Q64519 Gm4780-202ENSMUST00000215200 2644 ntBASIC12.26□□□□□ -0.45
Sdc3Q64519 Clec18a-203ENSMUST00000188466 1973 ntAPPRIS ALT2 TSL 5 BASIC12.26□□□□□ -0.45
Sdc3Q64519 Clec18a-201ENSMUST00000039597 1998 ntAPPRIS P5 TSL 5 BASIC12.26□□□□□ -0.45
Sdc3Q64519 Gm8793-201ENSMUST00000183069 1303 ntBASIC12.26□□□□□ -0.45
Sdc3Q64519 Arhgef2-208ENSMUST00000175911 2030 ntAPPRIS ALT2 TSL 5 BASIC12.26□□□□□ -0.45
Sdc3Q64519 Hvcn1-201ENSMUST00000072602 2790 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Sdc3Q64519 Arhgap20os-204ENSMUST00000152203 2113 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Sdc3Q64519 Pde4d-201ENSMUST00000074103 2167 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Sdc3Q64519 Bbof1-201ENSMUST00000081828 2187 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Sdc3Q64519 Mafk-202ENSMUST00000110836 3097 ntAPPRIS P1 TSL 5 BASIC12.26□□□□□ -0.45
Sdc3Q64519 Slc25a42-201ENSMUST00000063788 3081 ntAPPRIS P1 TSL 5 BASIC12.26□□□□□ -0.45
Sdc3Q64519 Rab3a-203ENSMUST00000110092 1556 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Sdc3Q64519 Nfkb2-202ENSMUST00000111881 3205 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 34.7 ms