Protein–RNA interactions for Protein: Q62280

Ss18, Protein SSXT, mousemouse

Predictions only

Length 418 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ss18Q62280 Pbrm1-206ENSMUST00000112094 5154 ntAPPRIS P5 TSL 5 BASIC9.41□□□□□ -0.9
Ss18Q62280 Zfp82-201ENSMUST00000080834 2181 ntAPPRIS P3 TSL 5 BASIC9.41□□□□□ -0.9
Ss18Q62280 Trappc2l-201ENSMUST00000015157 1659 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Ss18Q62280 Heatr3-202ENSMUST00000121949 3086 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
Ss18Q62280 Lin28a-201ENSMUST00000051674 3505 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Ss18Q62280 Usp17le-201ENSMUST00000053464 1626 ntTSL 5 BASIC9.41□□□□□ -0.9
Ss18Q62280 Gprc5a-201ENSMUST00000050104 2083 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Ss18Q62280 Sept10-201ENSMUST00000165971 2532 ntAPPRIS P2 TSL 1 (best) BASIC9.41□□□□□ -0.9
Ss18Q62280 Nupl1-206ENSMUST00000225111 2936 ntBASIC9.41□□□□□ -0.9
Ss18Q62280 Cpa1-201ENSMUST00000031806 1583 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Ss18Q62280 Ninl-201ENSMUST00000109896 5093 ntAPPRIS P1 TSL 5 BASIC9.41□□□□□ -0.9
Ss18Q62280 Eif4enif1-213ENSMUST00000179770 3676 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Ss18Q62280 Cyb5rl-201ENSMUST00000030364 2360 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
Ss18Q62280 Nexmif-202ENSMUST00000087879 10891 ntAPPRIS P2 TSL 1 (best) BASIC9.41□□□□□ -0.9
Ss18Q62280 Apol6-206ENSMUST00000149569 2315 ntAPPRIS ALT2 TSL 1 (best) BASIC9.4□□□□□ -0.9
Ss18Q62280 1110002L01Rik-202ENSMUST00000168012 3569 ntTSL 2 BASIC9.4□□□□□ -0.9
Ss18Q62280 Igf2-204ENSMUST00000105936 3970 ntAPPRIS P1 TSL 2 BASIC9.4□□□□□ -0.9
Ss18Q62280 Gm9866-202ENSMUST00000182473 1882 ntTSL 1 (best) BASIC9.4□□□□□ -0.9
Ss18Q62280 Ccdc187-201ENSMUST00000057224 3148 ntAPPRIS P2 TSL 1 (best) BASIC9.4□□□□□ -0.9
Ss18Q62280 4930473A02Rik-202ENSMUST00000136793 1409 ntTSL 1 (best) BASIC9.4□□□□□ -0.9
Ss18Q62280 Wisp3-201ENSMUST00000076713 1419 ntAPPRIS P1 TSL 5 BASIC9.4□□□□□ -0.9
Ss18Q62280 Capn3-201ENSMUST00000028748 2606 ntTSL 1 (best) BASIC9.4□□□□□ -0.9
Ss18Q62280 Pced1b-201ENSMUST00000059433 2185 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
Ss18Q62280 Ppp1r18-206ENSMUST00000190496 1395 ntTSL 1 (best) BASIC9.4□□□□□ -0.9
Ss18Q62280 P4ha1-203ENSMUST00000105466 2918 ntAPPRIS ALT1 TSL 1 (best) BASIC9.4□□□□□ -0.9
Ss18Q62280 Spata33-202ENSMUST00000212161 2941 ntTSL 2 BASIC9.4□□□□□ -0.9
Ss18Q62280 Pofut1-201ENSMUST00000049863 5600 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
Ss18Q62280 N6amt1-203ENSMUST00000118310 1700 ntTSL 1 (best) BASIC9.4□□□□□ -0.9
Ss18Q62280 Poc1b-201ENSMUST00000020113 2862 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
Ss18Q62280 Tapbp-201ENSMUST00000025161 2894 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
Ss18Q62280 Ppp1r16b-202ENSMUST00000052927 6685 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
Ss18Q62280 Suox-201ENSMUST00000054764 2497 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
Ss18Q62280 Mecr-201ENSMUST00000030742 1337 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
Ss18Q62280 Myo18a-205ENSMUST00000100794 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC9.4□□□□□ -0.9
Ss18Q62280 Tufm-201ENSMUST00000098048 1679 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
Ss18Q62280 Gm16342-201ENSMUST00000124025 1025 ntBASIC9.4□□□□□ -0.9
Ss18Q62280 Gnb2-209ENSMUST00000143495 1285 ntTSL 5 BASIC9.4□□□□□ -0.9
Ss18Q62280 4930407G08Rik-201ENSMUST00000145831 698 ntTSL 1 (best) BASIC9.4□□□□□ -0.9
Ss18Q62280 Smad7-204ENSMUST00000174411 769 ntTSL 5 BASIC9.4□□□□□ -0.9
Ss18Q62280 Flg-208ENSMUST00000180308 1076 ntTSL 1 (best) BASIC9.4□□□□□ -0.9
Ss18Q62280 Kansl3-206ENSMUST00000187628 336 ntTSL 5 BASIC9.4□□□□□ -0.9
Ss18Q62280 1700028E10Rik-205ENSMUST00000202024 924 ntTSL 1 (best) BASIC9.4□□□□□ -0.9
Ss18Q62280 AC132467.2-202ENSMUST00000227726 559 ntBASIC9.4□□□□□ -0.9
Ss18Q62280 Reep6-201ENSMUST00000040081 850 ntTSL 5 BASIC9.4□□□□□ -0.9
Ss18Q62280 Tex13c3-201ENSMUST00000089246 876 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
Ss18Q62280 Sema3g-201ENSMUST00000090180 4540 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
Ss18Q62280 Mafk-202ENSMUST00000110836 3097 ntAPPRIS P1 TSL 5 BASIC9.4□□□□□ -0.9
Ss18Q62280 Nde1-203ENSMUST00000117958 1551 ntTSL 1 (best) BASIC9.4□□□□□ -0.9
Ss18Q62280 B4galnt3-203ENSMUST00000212457 2958 ntAPPRIS ALT2 TSL 5 BASIC9.4□□□□□ -0.9
Ss18Q62280 Dlg4-204ENSMUST00000108589 3271 ntTSL 5 BASIC9.4□□□□□ -0.9
Ss18Q62280 Kcnc2-204ENSMUST00000219301 2944 ntAPPRIS P2 TSL 1 (best) BASIC9.4□□□□□ -0.9
Ss18Q62280 Btnl2-202ENSMUST00000178562 2563 ntAPPRIS ALT2 TSL 5 BASIC9.4□□□□□ -0.9
Ss18Q62280 Btnl2-201ENSMUST00000025198 2564 ntAPPRIS P2 TSL 1 (best) BASIC9.4□□□□□ -0.9
Ss18Q62280 Siglecg-201ENSMUST00000005592 2569 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
Ss18Q62280 Nudt8-201ENSMUST00000155405 3904 ntAPPRIS P1 TSL 2 BASIC9.4□□□□□ -0.91
Ss18Q62280 Kmt5b-207ENSMUST00000113974 4150 ntAPPRIS P3 TSL 5 BASIC9.4□□□□□ -0.91
Ss18Q62280 Clpb-211ENSMUST00000209579 4159 ntAPPRIS ALT2 TSL 1 (best) BASIC9.4□□□□□ -0.91
Ss18Q62280 Paupar-201ENSMUST00000194826 3482 ntBASIC9.4□□□□□ -0.91
Ss18Q62280 Sdc4-201ENSMUST00000017153 2458 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.91
Ss18Q62280 Chpf2-202ENSMUST00000121863 3715 ntAPPRIS P1 TSL 5 BASIC9.4□□□□□ -0.91
Ss18Q62280 Poc1b-203ENSMUST00000159228 1799 ntTSL 1 (best) BASIC9.4□□□□□ -0.91
Ss18Q62280 Grip1-205ENSMUST00000105262 4996 ntAPPRIS ALT2 TSL 1 (best) BASIC9.4□□□□□ -0.91
Ss18Q62280 Sv2a-201ENSMUST00000035371 4334 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.91
Ss18Q62280 Gm33543-203ENSMUST00000211096 1722 ntAPPRIS P5 TSL 5 BASIC9.39□□□□□ -0.91
Ss18Q62280 Rims2-202ENSMUST00000082054 4800 ntAPPRIS P3 TSL 2 BASIC9.39□□□□□ -0.91
Ss18Q62280 Gsn-205ENSMUST00000201185 2607 ntAPPRIS ALT2 TSL 1 (best) BASIC9.39□□□□□ -0.91
Ss18Q62280 Incenp-201ENSMUST00000025562 3217 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Ss18Q62280 Gm9755-201ENSMUST00000032981 1356 ntBASIC9.39□□□□□ -0.91
Ss18Q62280 Pcdhb17-201ENSMUST00000053856 4660 ntAPPRIS P1 BASIC9.39□□□□□ -0.91
Ss18Q62280 Hps3-201ENSMUST00000012580 4016 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Ss18Q62280 Gm26770-201ENSMUST00000180586 2237 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
Ss18Q62280 Gm9279-201ENSMUST00000223175 1606 ntBASIC9.39□□□□□ -0.91
Ss18Q62280 Nt5c3b-203ENSMUST00000107397 1348 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
Ss18Q62280 Cerk-203ENSMUST00000156546 2162 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
Ss18Q62280 Pggt1b-201ENSMUST00000025354 2736 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Ss18Q62280 Acoxl-202ENSMUST00000110344 1573 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
Ss18Q62280 Kcnab2-203ENSMUST00000159186 1552 ntTSL 5 BASIC9.39□□□□□ -0.91
Ss18Q62280 Celrr-202ENSMUST00000181433 1561 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
Ss18Q62280 Gm8994-202ENSMUST00000204530 1573 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Ss18Q62280 Gm22189-201ENSMUST00000103822 86 ntBASIC9.39□□□□□ -0.91
Ss18Q62280 Fgf18-202ENSMUST00000109363 991 ntTSL 3 BASIC9.39□□□□□ -0.91
Ss18Q62280 Rasgrp2-207ENSMUST00000113475 573 ntTSL 5 BASIC9.39□□□□□ -0.91
Ss18Q62280 Rgs20-203ENSMUST00000119256 883 ntAPPRIS ALT2 TSL 3 BASIC9.39□□□□□ -0.91
Ss18Q62280 Rpl17-ps5-201ENSMUST00000121001 555 ntBASIC9.39□□□□□ -0.91
Ss18Q62280 Pigyl-201ENSMUST00000123680 695 ntAPPRIS P1 TSL 2 BASIC9.39□□□□□ -0.91
Ss18Q62280 Gm15945-201ENSMUST00000146755 810 ntTSL 3 BASIC9.39□□□□□ -0.91
Ss18Q62280 Cpsf4l-205ENSMUST00000173655 1213 ntAPPRIS P3 TSL 1 (best) BASIC9.39□□□□□ -0.91
Ss18Q62280 Zfp429-202ENSMUST00000181071 2117 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
Ss18Q62280 Gm27437-201ENSMUST00000183429 107 ntBASIC9.39□□□□□ -0.91
Ss18Q62280 Gm44855-201ENSMUST00000205725 362 ntBASIC9.39□□□□□ -0.91
Ss18Q62280 Gm29682-201ENSMUST00000210896 1251 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
Ss18Q62280 1700011B04Rik-206ENSMUST00000221013 824 ntTSL 5 BASIC9.39□□□□□ -0.91
Ss18Q62280 Aak1-201ENSMUST00000003710 7203 ntAPPRIS P3 TSL 5 BASIC9.39□□□□□ -0.91
Ss18Q62280 Ins1-201ENSMUST00000039652 1016 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Ss18Q62280 Gm16372-201ENSMUST00000073088 450 ntBASIC9.39□□□□□ -0.91
Ss18Q62280 Tfe3-205ENSMUST00000115678 2658 ntTSL 5 BASIC9.39□□□□□ -0.91
Ss18Q62280 Ccdc126-202ENSMUST00000114491 2372 ntTSL 5 BASIC9.39□□□□□ -0.91
Ss18Q62280 Apol9b-201ENSMUST00000109775 1545 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Ss18Q62280 Gm45253-201ENSMUST00000210694 2076 ntTSL 5 BASIC9.39□□□□□ -0.91
Ss18Q62280 Pdxdc1-204ENSMUST00000115804 2880 ntAPPRIS P3 TSL 1 (best) BASIC9.39□□□□□ -0.91
Retrieved 100 of 76,532 protein–RNA pairs in 101 ms