Protein–RNA interactions for Protein: Q61466

Smarcd1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 1, mousemouse

Known RBP Predictions only

Length 515 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcd1Q61466 Lrrc52-201ENSMUST00000036643 1143 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Smarcd1Q61466 Polr2e-201ENSMUST00000004786 1148 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Smarcd1Q61466 Zdhhc12-201ENSMUST00000081838 1187 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Smarcd1Q61466 Gm6502-202ENSMUST00000097478 1218 ntTSL 5 BASIC13.25□□□□□ -0.29
Smarcd1Q61466 Odf2-201ENSMUST00000028128 2376 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
Smarcd1Q61466 Inpp5a-202ENSMUST00000097975 2301 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Smarcd1Q61466 Gpd2-201ENSMUST00000028167 5620 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Smarcd1Q61466 Atp6ap1-202ENSMUST00000114171 2157 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Smarcd1Q61466 Snx13-201ENSMUST00000048519 6231 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Smarcd1Q61466 Evc2-201ENSMUST00000056365 4091 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Smarcd1Q61466 Stx18-203ENSMUST00000114126 3002 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Smarcd1Q61466 Pcdhb18-201ENSMUST00000055949 5041 ntAPPRIS P1 BASIC13.25□□□□□ -0.29
Smarcd1Q61466 Phactr3-205ENSMUST00000108917 4858 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Smarcd1Q61466 Chrnd-202ENSMUST00000186373 2949 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Smarcd1Q61466 Spop-202ENSMUST00000107724 2881 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Smarcd1Q61466 Aldh9a1-201ENSMUST00000028004 2835 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Smarcd1Q61466 F7-201ENSMUST00000033820 1859 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Smarcd1Q61466 Rnft2-202ENSMUST00000121369 4431 ntAPPRIS ALT1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Smarcd1Q61466 Grin1-201ENSMUST00000028335 4238 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Smarcd1Q61466 Uchl1os-201ENSMUST00000152002 1685 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Smarcd1Q61466 Spred3-201ENSMUST00000048923 4056 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Smarcd1Q61466 1700128E19Rik-201ENSMUST00000134409 2439 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Smarcd1Q61466 E130308A19Rik-201ENSMUST00000052420 3205 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Smarcd1Q61466 Mfsd4b5-205ENSMUST00000170579 1554 ntAPPRIS P1 TSL 2 BASIC13.24□□□□□ -0.29
Smarcd1Q61466 Gm42840-201ENSMUST00000200303 2251 ntBASIC13.24□□□□□ -0.29
Smarcd1Q61466 Rph3al-204ENSMUST00000121287 2199 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
Smarcd1Q61466 Gm15477-201ENSMUST00000140578 2130 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Smarcd1Q61466 Tnk2-201ENSMUST00000115120 2794 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Smarcd1Q61466 Gm43045-201ENSMUST00000198725 2095 ntBASIC13.24□□□□□ -0.29
Smarcd1Q61466 Pcdh19-202ENSMUST00000149154 10289 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
Smarcd1Q61466 Tle6-201ENSMUST00000072020 2015 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
Smarcd1Q61466 Nkd2-201ENSMUST00000022051 4016 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
Smarcd1Q61466 Zfp346-201ENSMUST00000021937 3333 ntAPPRIS P2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Smarcd1Q61466 Myh10-204ENSMUST00000108673 1315 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Smarcd1Q61466 Bud23-203ENSMUST00000111205 1169 ntAPPRIS ALT2 TSL 3 BASIC13.24□□□□□ -0.29
Smarcd1Q61466 Gm13350-201ENSMUST00000120519 479 ntBASIC13.24□□□□□ -0.29
Smarcd1Q61466 Gm13394-201ENSMUST00000121658 1000 ntBASIC13.24□□□□□ -0.29
Smarcd1Q61466 C130026I21Rik-205ENSMUST00000161267 652 ntAPPRIS ALT2 TSL 3 BASIC13.24□□□□□ -0.29
Smarcd1Q61466 Gm26973-201ENSMUST00000182105 696 ntTSL 3 BASIC13.24□□□□□ -0.29
Smarcd1Q61466 Gm37201-201ENSMUST00000191845 523 ntBASIC13.24□□□□□ -0.29
Smarcd1Q61466 Fgfr3-ps-201ENSMUST00000195511 1137 ntBASIC13.24□□□□□ -0.29
Smarcd1Q61466 Gm42838-201ENSMUST00000196503 439 ntTSL 5 BASIC13.24□□□□□ -0.29
Smarcd1Q61466 Gm5565-201ENSMUST00000199463 1162 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
Smarcd1Q61466 Gm39318-201ENSMUST00000214606 1118 ntTSL 3 BASIC13.24□□□□□ -0.29
Smarcd1Q61466 Gm30285-201ENSMUST00000214614 422 ntBASIC13.24□□□□□ -0.29
Smarcd1Q61466 AC166095.1-201ENSMUST00000223731 1241 ntBASIC13.24□□□□□ -0.29
Smarcd1Q61466 Gm3402-201ENSMUST00000036715 981 ntAPPRIS ALT2 TSL 5 BASIC13.24□□□□□ -0.29
Smarcd1Q61466 Adam32-202ENSMUST00000121438 2450 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
Smarcd1Q61466 Polrmt-202ENSMUST00000159016 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Smarcd1Q61466 Gm5422-202ENSMUST00000216161 2928 ntTSL 5 BASIC13.24□□□□□ -0.29
Smarcd1Q61466 Nrxn1-207ENSMUST00000160844 9309 ntAPPRIS P2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Smarcd1Q61466 Dmrta1-201ENSMUST00000052478 4079 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Smarcd1Q61466 Tesmin-203ENSMUST00000142193 2279 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Smarcd1Q61466 Acat2-201ENSMUST00000007005 2250 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Smarcd1Q61466 Arhgef39-201ENSMUST00000054538 1659 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Smarcd1Q61466 Ext1-201ENSMUST00000077273 7663 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Smarcd1Q61466 Hnrnpk-232ENSMUST00000225674 2704 ntBASIC13.24□□□□□ -0.29
Smarcd1Q61466 Celf3-201ENSMUST00000029784 2744 ntAPPRIS P2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Smarcd1Q61466 Lcor-201ENSMUST00000067795 4810 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Smarcd1Q61466 Mcm8-201ENSMUST00000028831 3179 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Smarcd1Q61466 Sept12-201ENSMUST00000170323 2576 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Smarcd1Q61466 Armc8-201ENSMUST00000035043 4647 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Smarcd1Q61466 Slc19a2-202ENSMUST00000159230 3432 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Smarcd1Q61466 Pcyox1-201ENSMUST00000032065 4295 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Smarcd1Q61466 Stt3b-201ENSMUST00000035010 4221 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Smarcd1Q61466 Gm26819-201ENSMUST00000180656 5128 ntTSL 5 BASIC13.23□□□□□ -0.29
Smarcd1Q61466 Atg7-207ENSMUST00000182428 2264 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
Smarcd1Q61466 Cdk5rap1-203ENSMUST00000109731 2160 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
Smarcd1Q61466 Tpm1-207ENSMUST00000113687 962 ntTSL 5 BASIC13.23□□□□□ -0.29
Smarcd1Q61466 Gm11531-201ENSMUST00000117614 555 ntBASIC13.23□□□□□ -0.29
Smarcd1Q61466 Gm8908-201ENSMUST00000121633 1024 ntBASIC13.23□□□□□ -0.29
Smarcd1Q61466 Gm17344-201ENSMUST00000171173 1159 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Smarcd1Q61466 Gm7584-201ENSMUST00000175829 940 ntBASIC13.23□□□□□ -0.29
Smarcd1Q61466 Gm27023-201ENSMUST00000182372 285 ntBASIC13.23□□□□□ -0.29
Smarcd1Q61466 2010320M18Rik-201ENSMUST00000191396 1009 ntBASIC13.23□□□□□ -0.29
Smarcd1Q61466 Gm38319-201ENSMUST00000194537 1266 ntBASIC13.23□□□□□ -0.29
Smarcd1Q61466 Brsk1-205ENSMUST00000206024 1216 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Smarcd1Q61466 Gm45184-201ENSMUST00000206354 955 ntTSL 5 BASIC13.23□□□□□ -0.29
Smarcd1Q61466 CT025533.2-201ENSMUST00000228715 1248 ntBASIC13.23□□□□□ -0.29
Smarcd1Q61466 Riiad1-201ENSMUST00000029785 630 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Smarcd1Q61466 Morn3-201ENSMUST00000031437 1128 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Smarcd1Q61466 Itln1-201ENSMUST00000043094 1141 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Smarcd1Q61466 Prmt2-203ENSMUST00000099572 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Smarcd1Q61466 Spata21-201ENSMUST00000051907 2526 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Smarcd1Q61466 Palm2-202ENSMUST00000102905 3271 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
Smarcd1Q61466 Rhot1-204ENSMUST00000092857 3687 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
Smarcd1Q61466 AC167669.2-201ENSMUST00000224417 1620 ntBASIC13.23□□□□□ -0.29
Smarcd1Q61466 Ppp1r13l-201ENSMUST00000047621 3130 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Smarcd1Q61466 Acadl-201ENSMUST00000027153 1916 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Smarcd1Q61466 Nol10-201ENSMUST00000046011 3021 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Smarcd1Q61466 Dnaaf2-201ENSMUST00000021356 3390 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Smarcd1Q61466 Agt-201ENSMUST00000063278 1891 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Smarcd1Q61466 Dlgap1-202ENSMUST00000097288 2626 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Smarcd1Q61466 Klhl38-201ENSMUST00000022985 2212 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Smarcd1Q61466 Cacna1g-202ENSMUST00000100561 8125 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
Smarcd1Q61466 Ppm1b-204ENSMUST00000112307 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Smarcd1Q61466 Tmub1-203ENSMUST00000115036 1455 ntTSL 5 BASIC13.23□□□□□ -0.29
Smarcd1Q61466 Olfr71-202ENSMUST00000107862 2587 ntAPPRIS P1 TSL 3 BASIC13.23□□□□□ -0.29
Smarcd1Q61466 Dis3l-203ENSMUST00000120760 3661 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Smarcd1Q61466 Hk3-208ENSMUST00000153665 2945 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 68 ms