Protein–RNA interactions for Protein: Q61321

Six4, Homeobox protein SIX4, mousemouse

Predictions only

Length 775 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Six4Q61321 Stk25-201ENSMUST00000027498 4249 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Six4Q61321 Tgm1-202ENSMUST00000168729 2852 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
Six4Q61321 Pcdha11-203ENSMUST00000192447 4583 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Six4Q61321 Ackr4-202ENSMUST00000076147 2389 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Six4Q61321 Fbxo28-201ENSMUST00000051431 4925 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Six4Q61321 Tmem200a-201ENSMUST00000066049 4115 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Six4Q61321 Gigyf2-201ENSMUST00000027475 5724 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
Six4Q61321 Slc16a2-201ENSMUST00000042664 4152 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Six4Q61321 Armc6-201ENSMUST00000019679 2263 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Six4Q61321 Trmt1-203ENSMUST00000109767 2138 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
Six4Q61321 Ntrk2-204ENSMUST00000224259 3049 ntBASIC12.82□□□□□ -0.36
Six4Q61321 Mapk8ip3-206ENSMUST00000120035 4125 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Six4Q61321 Ube2k-210ENSMUST00000202679 4682 ntTSL 5 BASIC12.82□□□□□ -0.36
Six4Q61321 Hdac5-203ENSMUST00000107151 4852 ntTSL 5 BASIC12.82□□□□□ -0.36
Six4Q61321 Ebag9-201ENSMUST00000022964 1613 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Six4Q61321 0610010K14Rik-203ENSMUST00000100950 545 ntTSL 2 BASIC12.82□□□□□ -0.36
Six4Q61321 Gm5863-201ENSMUST00000121760 1008 ntBASIC12.82□□□□□ -0.36
Six4Q61321 Med9os-203ENSMUST00000146334 527 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Six4Q61321 Gm16124-201ENSMUST00000146938 516 ntTSL 2 BASIC12.82□□□□□ -0.36
Six4Q61321 AI480526-203ENSMUST00000160099 1017 ntTSL 2 BASIC12.82□□□□□ -0.36
Six4Q61321 4833427G06Rik-201ENSMUST00000170947 973 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Six4Q61321 Gm42693-201ENSMUST00000196779 631 ntBASIC12.82□□□□□ -0.36
Six4Q61321 Crip2-206ENSMUST00000200380 864 ntTSL 3 BASIC12.82□□□□□ -0.36
Six4Q61321 Gm45437-201ENSMUST00000209998 448 ntTSL 3 BASIC12.82□□□□□ -0.36
Six4Q61321 AC155813.1-201ENSMUST00000213224 590 ntTSL 3 BASIC12.82□□□□□ -0.36
Six4Q61321 AC125350.2-201ENSMUST00000224737 727 ntBASIC12.82□□□□□ -0.36
Six4Q61321 Ambp-201ENSMUST00000030041 1268 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Six4Q61321 Asb9-201ENSMUST00000033756 1139 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Six4Q61321 Il25-201ENSMUST00000037863 1064 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Six4Q61321 Tmem40-201ENSMUST00000072933 1272 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
Six4Q61321 Gm26035-201ENSMUST00000083065 308 ntBASIC12.82□□□□□ -0.36
Six4Q61321 Gm17080-201ENSMUST00000087588 811 ntTSL 5 BASIC12.82□□□□□ -0.36
Six4Q61321 Olfr707-201ENSMUST00000088687 924 ntAPPRIS P1 BASIC12.82□□□□□ -0.36
Six4Q61321 Olfr1532-ps1-201ENSMUST00000098140 924 ntAPPRIS P1 BASIC12.82□□□□□ -0.36
Six4Q61321 Tmem201-203ENSMUST00000105687 3697 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Six4Q61321 Mcm8-202ENSMUST00000066559 3397 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
Six4Q61321 Sall4-201ENSMUST00000029061 5073 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Six4Q61321 AC154262.2-202ENSMUST00000225158 1331 ntBASIC12.82□□□□□ -0.36
Six4Q61321 Hdgfl2-201ENSMUST00000002911 2264 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Six4Q61321 Banp-210ENSMUST00000173254 1521 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
Six4Q61321 Chmp5-201ENSMUST00000030128 1519 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Six4Q61321 Gpr19-203ENSMUST00000111932 1711 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Six4Q61321 Tmem39a-201ENSMUST00000002924 2871 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Six4Q61321 Scarf1-201ENSMUST00000042808 2887 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Six4Q61321 Wipf3-201ENSMUST00000126637 4414 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
Six4Q61321 Cyp1a2-201ENSMUST00000034860 1940 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Six4Q61321 Rcsd1-202ENSMUST00000097474 5001 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Six4Q61321 Lpar2-202ENSMUST00000164890 5800 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Six4Q61321 Diaph2-207ENSMUST00000167619 8439 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
Six4Q61321 Tmem80-204ENSMUST00000128906 1387 ntTSL 2 BASIC12.81□□□□□ -0.36
Six4Q61321 Gm3756-201ENSMUST00000169182 1355 ntBASIC12.81□□□□□ -0.36
Six4Q61321 Pex2-206ENSMUST00000195855 1587 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Six4Q61321 Cd27-201ENSMUST00000032486 1559 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Six4Q61321 Ccng2-202ENSMUST00000121127 2570 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Six4Q61321 BC055324-201ENSMUST00000045876 3179 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Six4Q61321 Spag1-201ENSMUST00000047348 3646 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Six4Q61321 Wnk1-203ENSMUST00000088644 11330 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
Six4Q61321 Trim27-205ENSMUST00000221464 1400 ntTSL 5 BASIC12.81□□□□□ -0.36
Six4Q61321 4933421I07Rik-201ENSMUST00000032648 1413 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Six4Q61321 Actrt2-201ENSMUST00000060062 1435 ntAPPRIS P1 BASIC12.81□□□□□ -0.36
Six4Q61321 Zbtb7b-203ENSMUST00000107433 3650 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Six4Q61321 Zfp444-204ENSMUST00000108567 5104 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Six4Q61321 Ahdc1-204ENSMUST00000105916 6602 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
Six4Q61321 AC158633.2-201ENSMUST00000222959 6046 ntTSL 5 BASIC12.81□□□□□ -0.36
Six4Q61321 Tmc8-204ENSMUST00000119455 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Six4Q61321 Dgkg-201ENSMUST00000023578 2725 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Six4Q61321 Dll1-201ENSMUST00000014917 3581 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Six4Q61321 Apoc1-202ENSMUST00000108451 532 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Six4Q61321 Rps2-ps9-201ENSMUST00000121414 817 ntBASIC12.81□□□□□ -0.36
Six4Q61321 Gm15635-202ENSMUST00000131160 917 ntTSL 3 BASIC12.81□□□□□ -0.36
Six4Q61321 Gm11630-201ENSMUST00000152825 382 ntTSL 2 BASIC12.81□□□□□ -0.36
Six4Q61321 Pcgf1-202ENSMUST00000165164 918 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Six4Q61321 Sirpa-214ENSMUST00000179001 3812 ntAPPRIS P3 TSL 5 BASIC12.81□□□□□ -0.36
Six4Q61321 Gm43630-201ENSMUST00000201550 776 ntBASIC12.81□□□□□ -0.36
Six4Q61321 Gm35082-201ENSMUST00000207308 338 ntTSL 3 BASIC12.81□□□□□ -0.36
Six4Q61321 Alkbh3-201ENSMUST00000040005 1228 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Six4Q61321 Phf24-201ENSMUST00000069184 6392 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Six4Q61321 Gm10097-201ENSMUST00000180100 2784 ntAPPRIS P1 BASIC12.81□□□□□ -0.36
Six4Q61321 Glo1-201ENSMUST00000024823 1935 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Six4Q61321 Sh3bp2-202ENSMUST00000101316 3031 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Six4Q61321 Ptpn9-201ENSMUST00000034832 4101 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Six4Q61321 Rbm39-203ENSMUST00000109587 2810 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
Six4Q61321 Fig4-201ENSMUST00000043814 3282 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Six4Q61321 Zp1-201ENSMUST00000025641 1963 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Six4Q61321 Tspan1-201ENSMUST00000030465 1985 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Six4Q61321 Tjap1-201ENSMUST00000012440 2426 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Six4Q61321 Wdr45-223ENSMUST00000207675 1335 ntTSL 5 BASIC12.81□□□□□ -0.36
Six4Q61321 Lrfn3-201ENSMUST00000046351 2886 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Six4Q61321 Bin3-201ENSMUST00000022680 1767 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Six4Q61321 Prkag3-202ENSMUST00000113672 2003 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Six4Q61321 Evx1os-201ENSMUST00000125305 2916 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Six4Q61321 Prkcsh-201ENSMUST00000003493 2012 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
Six4Q61321 Rsbn1-201ENSMUST00000051139 4762 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Six4Q61321 Pnma3-201ENSMUST00000060418 3405 ntAPPRIS P1 BASIC12.81□□□□□ -0.36
Six4Q61321 Gm26799-201ENSMUST00000180959 1361 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Six4Q61321 Zfp41-201ENSMUST00000054555 3736 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Six4Q61321 Kif13a-201ENSMUST00000056978 6866 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Six4Q61321 Dnm2-206ENSMUST00000172482 2613 ntAPPRIS P4 TSL 5 BASIC12.8□□□□□ -0.36
Six4Q61321 Ptprk-202ENSMUST00000218276 4754 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Six4Q61321 Slc4a4-207ENSMUST00000148750 7931 ntAPPRIS P3 TSL 5 BASIC12.8□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 43.2 ms