Protein–RNA interactions for Protein: Q5S006

Lrrk2, Leucine-rich repeat serine/threonine-protein kinase 2, mousemouse

Predictions only

Length 2,527 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lrrk2Q5S006 AU040320-201ENSMUST00000047431 4384 ntAPPRIS ALT2 TSL 1 (best) BASIC11.06□□□□□ -0.64
Lrrk2Q5S006 Ccna1-204ENSMUST00000198320 1564 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Lrrk2Q5S006 5330426L24Rik-201ENSMUST00000200008 2175 ntBASIC11.06□□□□□ -0.64
Lrrk2Q5S006 Cyp2c53-ps-203ENSMUST00000176493 1443 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Lrrk2Q5S006 G3bp2-202ENSMUST00000164378 3026 ntAPPRIS P3 TSL 1 (best) BASIC11.05□□□□□ -0.64
Lrrk2Q5S006 Nob1-201ENSMUST00000003946 1658 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Lrrk2Q5S006 Caprin2-202ENSMUST00000111569 3697 ntAPPRIS P2 TSL 1 (best) BASIC11.05□□□□□ -0.64
Lrrk2Q5S006 Cnnm2-202ENSMUST00000099373 3558 ntAPPRIS P4 TSL 1 (best) BASIC11.05□□□□□ -0.64
Lrrk2Q5S006 Tnnt3-206ENSMUST00000105944 753 ntAPPRIS ALT2 TSL 1 (best) BASIC11.05□□□□□ -0.64
Lrrk2Q5S006 Tnnt3-210ENSMUST00000105948 753 ntAPPRIS ALT2 TSL 1 (best) BASIC11.05□□□□□ -0.64
Lrrk2Q5S006 Tnnt3-212ENSMUST00000105950 1037 ntAPPRIS ALT2 TSL 5 BASIC11.05□□□□□ -0.64
Lrrk2Q5S006 Rab15-203ENSMUST00000121716 739 ntTSL 3 BASIC11.05□□□□□ -0.64
Lrrk2Q5S006 Gm23085-201ENSMUST00000157849 293 ntBASIC11.05□□□□□ -0.64
Lrrk2Q5S006 Tnnt3-224ENSMUST00000169299 1013 ntAPPRIS ALT2 TSL 5 BASIC11.05□□□□□ -0.64
Lrrk2Q5S006 Tnnt3-226ENSMUST00000180152 1067 ntAPPRIS ALT2 TSL 5 BASIC11.05□□□□□ -0.64
Lrrk2Q5S006 Gm43416-201ENSMUST00000201916 1015 ntBASIC11.05□□□□□ -0.64
Lrrk2Q5S006 AC140409.3-201ENSMUST00000215601 358 ntTSL 3 BASIC11.05□□□□□ -0.64
Lrrk2Q5S006 Tm2d3-201ENSMUST00000032726 908 ntAPPRIS ALT2 TSL 1 (best) BASIC11.05□□□□□ -0.64
Lrrk2Q5S006 Myrf-201ENSMUST00000088013 5674 ntAPPRIS ALT2 TSL 5 BASIC11.05□□□□□ -0.64
Lrrk2Q5S006 Kdelr1-201ENSMUST00000002855 1599 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Lrrk2Q5S006 Prmt2-203ENSMUST00000099572 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC11.05□□□□□ -0.64
Lrrk2Q5S006 Fam189b-203ENSMUST00000119707 2415 ntTSL 5 BASIC11.05□□□□□ -0.64
Lrrk2Q5S006 Dubr-204ENSMUST00000186944 2052 ntTSL 2 BASIC11.05□□□□□ -0.64
Lrrk2Q5S006 Grin1os-201ENSMUST00000129723 2891 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Lrrk2Q5S006 Mixl1-201ENSMUST00000027778 2294 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Lrrk2Q5S006 Fdft1-204ENSMUST00000224625 3698 ntAPPRIS P1 BASIC11.05□□□□□ -0.64
Lrrk2Q5S006 Slc3a2-202ENSMUST00000170157 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC11.05□□□□□ -0.64
Lrrk2Q5S006 Erfe-201ENSMUST00000086861 2815 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Lrrk2Q5S006 Fbxo30-202ENSMUST00000129456 5060 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Lrrk2Q5S006 Fbxw9-201ENSMUST00000095220 1907 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Lrrk2Q5S006 Inpp4b-215ENSMUST00000217122 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC11.05□□□□□ -0.64
Lrrk2Q5S006 Col7a1-202ENSMUST00000112070 9250 ntAPPRIS P1 TSL 5 BASIC11.05□□□□□ -0.64
Lrrk2Q5S006 Ldlrap1-201ENSMUST00000037828 6549 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Lrrk2Q5S006 1300017J02Rik-202ENSMUST00000123530 1874 ntTSL 5 BASIC11.05□□□□□ -0.64
Lrrk2Q5S006 AC110816.2-201ENSMUST00000220360 1323 ntTSL 5 BASIC11.05□□□□□ -0.64
Lrrk2Q5S006 Gm13668-201ENSMUST00000119237 1001 ntBASIC11.05□□□□□ -0.64
Lrrk2Q5S006 Apobr-203ENSMUST00000137646 457 ntAPPRIS ALT2 TSL 2 BASIC11.05□□□□□ -0.64
Lrrk2Q5S006 4930535L15Rik-201ENSMUST00000175891 536 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Lrrk2Q5S006 Mir8115-201ENSMUST00000184992 119 ntBASIC11.05□□□□□ -0.64
Lrrk2Q5S006 Gm31479-201ENSMUST00000209936 522 ntTSL 3 BASIC11.05□□□□□ -0.64
Lrrk2Q5S006 AC155712.2-201ENSMUST00000220398 643 ntTSL 3 BASIC11.05□□□□□ -0.64
Lrrk2Q5S006 AC134860.1-201ENSMUST00000224867 660 ntBASIC11.05□□□□□ -0.64
Lrrk2Q5S006 Olfr284-201ENSMUST00000063289 918 ntAPPRIS P1 BASIC11.05□□□□□ -0.64
Lrrk2Q5S006 Gm37324-201ENSMUST00000194500 4504 ntBASIC11.05□□□□□ -0.64
Lrrk2Q5S006 Ugt1a2-201ENSMUST00000049289 2211 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Lrrk2Q5S006 Gm5124-201ENSMUST00000127554 1970 ntTSL 5 BASIC11.05□□□□□ -0.64
Lrrk2Q5S006 F2-201ENSMUST00000028681 1988 ntAPPRIS P2 TSL 1 (best) BASIC11.05□□□□□ -0.64
Lrrk2Q5S006 Sh3glb2-202ENSMUST00000100215 1749 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Lrrk2Q5S006 Nrxn1-201ENSMUST00000054059 4697 ntTSL 5 BASIC11.05□□□□□ -0.64
Lrrk2Q5S006 Gm26651-201ENSMUST00000181851 2325 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Lrrk2Q5S006 Cchcr1-201ENSMUST00000045956 2748 ntAPPRIS P2 TSL 1 (best) BASIC11.05□□□□□ -0.64
Lrrk2Q5S006 Wdr45-204ENSMUST00000115689 1568 ntAPPRIS P2 TSL 1 (best) BASIC11.05□□□□□ -0.64
Lrrk2Q5S006 Ldlrad3-201ENSMUST00000058790 3833 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Lrrk2Q5S006 Nfatc2ip-201ENSMUST00000075671 3388 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Lrrk2Q5S006 Brix1-201ENSMUST00000022855 2664 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Lrrk2Q5S006 Carmil3-201ENSMUST00000076236 4602 ntAPPRIS P1 TSL 2 BASIC11.04□□□□□ -0.64
Lrrk2Q5S006 Slc26a4-201ENSMUST00000001253 3075 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Lrrk2Q5S006 Acvr2a-201ENSMUST00000063886 5686 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Lrrk2Q5S006 Egr3-204ENSMUST00000225200 3940 ntAPPRIS P2 BASIC11.04□□□□□ -0.64
Lrrk2Q5S006 Sept8-204ENSMUST00000121334 2801 ntAPPRIS ALT2 TSL 5 BASIC11.04□□□□□ -0.64
Lrrk2Q5S006 Gm13549-201ENSMUST00000118339 796 ntBASIC11.04□□□□□ -0.64
Lrrk2Q5S006 Gm8737-201ENSMUST00000122208 642 ntBASIC11.04□□□□□ -0.64
Lrrk2Q5S006 2810408I11Rik-201ENSMUST00000122813 435 ntTSL 2 BASIC11.04□□□□□ -0.64
Lrrk2Q5S006 Gm16296-201ENSMUST00000159905 325 ntBASIC11.04□□□□□ -0.64
Lrrk2Q5S006 Hmgn3-201ENSMUST00000161796 862 ntAPPRIS ALT1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Lrrk2Q5S006 S100a14-201ENSMUST00000164481 915 ntTSL 2 BASIC11.04□□□□□ -0.64
Lrrk2Q5S006 E030018B13Rik-201ENSMUST00000177638 1015 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Lrrk2Q5S006 Mmp7-201ENSMUST00000018767 1068 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Lrrk2Q5S006 Gm28516-201ENSMUST00000190257 663 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Lrrk2Q5S006 Gm18059-201ENSMUST00000208073 580 ntBASIC11.04□□□□□ -0.64
Lrrk2Q5S006 Gm45781-201ENSMUST00000212860 539 ntTSL 5 BASIC11.04□□□□□ -0.64
Lrrk2Q5S006 Ngdn-201ENSMUST00000022815 1200 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Lrrk2Q5S006 Elovl1-202ENSMUST00000067896 1137 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Lrrk2Q5S006 Ano1-201ENSMUST00000033393 4585 ntAPPRIS ALT2 TSL 5 BASIC11.04□□□□□ -0.64
Lrrk2Q5S006 Gm10676-201ENSMUST00000098778 3221 ntBASIC11.04□□□□□ -0.64
Lrrk2Q5S006 Rps6ka5-201ENSMUST00000043599 4406 ntAPPRIS P2 TSL 1 (best) BASIC11.04□□□□□ -0.64
Lrrk2Q5S006 Grin1-203ENSMUST00000114308 4165 ntTSL 5 BASIC11.04□□□□□ -0.64
Lrrk2Q5S006 Hoxc4-201ENSMUST00000100164 1983 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Lrrk2Q5S006 Arhgap20os-204ENSMUST00000152203 2113 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Lrrk2Q5S006 Tekt4-201ENSMUST00000025002 1532 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Lrrk2Q5S006 Dnajc28-201ENSMUST00000049244 1891 ntAPPRIS ALT2 TSL 1 (best) BASIC11.04□□□□□ -0.64
Lrrk2Q5S006 Rest-202ENSMUST00000113449 6924 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Lrrk2Q5S006 Pphln1-204ENSMUST00000165935 3473 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Lrrk2Q5S006 Dnaaf5-201ENSMUST00000026975 3450 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Lrrk2Q5S006 Gm13263-201ENSMUST00000121271 838 ntBASIC11.04□□□□□ -0.64
Lrrk2Q5S006 Gm13523-201ENSMUST00000151820 488 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Lrrk2Q5S006 Gm28166-201ENSMUST00000187637 620 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Lrrk2Q5S006 Nipsnap3a-204ENSMUST00000188045 1099 ntAPPRIS P2 TSL 1 (best) BASIC11.04□□□□□ -0.64
Lrrk2Q5S006 Gm17877-201ENSMUST00000192578 814 ntBASIC11.04□□□□□ -0.64
Lrrk2Q5S006 Gm9645-201ENSMUST00000197131 792 ntBASIC11.04□□□□□ -0.64
Lrrk2Q5S006 Gm31166-202ENSMUST00000210638 1268 ntTSL 3 BASIC11.04□□□□□ -0.64
Lrrk2Q5S006 AC027700.1-201ENSMUST00000213965 370 ntTSL 5 BASIC11.04□□□□□ -0.64
Lrrk2Q5S006 Olfr1347-205ENSMUST00000220413 964 ntBASIC11.04□□□□□ -0.64
Lrrk2Q5S006 Bloc1s1-201ENSMUST00000026405 550 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Lrrk2Q5S006 Olfr1347-201ENSMUST00000036357 964 ntAPPRIS P1 BASIC11.04□□□□□ -0.64
Lrrk2Q5S006 Snap29-201ENSMUST00000023449 3429 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Lrrk2Q5S006 Clec18a-203ENSMUST00000188466 1973 ntAPPRIS ALT2 TSL 5 BASIC11.04□□□□□ -0.64
Lrrk2Q5S006 Orc3-201ENSMUST00000048706 2300 ntAPPRIS P3 TSL 1 (best) BASIC11.04□□□□□ -0.64
Lrrk2Q5S006 Slc6a17-208ENSMUST00000169449 6322 ntAPPRIS ALT1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Lrrk2Q5S006 Slc6a17-201ENSMUST00000029499 6308 ntAPPRIS P3 TSL 1 (best) BASIC11.04□□□□□ -0.64
Retrieved 100 of 76,532 protein–RNA pairs in 100.8 ms