Protein–RNA interactions for Protein: Q3USH5

Sfswap, Splicing factor, suppressor of white-apricot homolog, mousemouse

Known RBP Predictions only

Length 945 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SfswapQ3USH5 Ins2-201ENSMUST00000000220 478 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
SfswapQ3USH5 Gm40437-201ENSMUST00000222338 767 ntTSL 5 BASIC15.17■□□□□ 0.02
SfswapQ3USH5 AC113031.8-201ENSMUST00000227856 631 ntBASIC15.17■□□□□ 0.02
SfswapQ3USH5 Ndufa3-201ENSMUST00000076657 515 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
SfswapQ3USH5 Tgm1-203ENSMUST00000178034 2730 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
SfswapQ3USH5 Gm44891-201ENSMUST00000208817 2223 ntBASIC15.17■□□□□ 0.02
SfswapQ3USH5 Zfp429-202ENSMUST00000181071 2117 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
SfswapQ3USH5 Gm43823-201ENSMUST00000197391 1808 ntBASIC15.17■□□□□ 0.02
SfswapQ3USH5 BC048403-202ENSMUST00000136432 2968 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
SfswapQ3USH5 Aph1a-201ENSMUST00000015894 2863 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
SfswapQ3USH5 Bhmt-201ENSMUST00000099309 2490 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
SfswapQ3USH5 Rad9b-202ENSMUST00000117263 2371 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
SfswapQ3USH5 Slc38a7-204ENSMUST00000212270 3315 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
SfswapQ3USH5 Slc39a8-201ENSMUST00000029810 3203 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
SfswapQ3USH5 Atg16l1-203ENSMUST00000113190 3102 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
SfswapQ3USH5 Tubb2a-ps2-201ENSMUST00000221547 1339 ntBASIC15.17■□□□□ 0.02
SfswapQ3USH5 D630023F18Rik-201ENSMUST00000050047 2180 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
SfswapQ3USH5 2810402E24Rik-201ENSMUST00000190699 3040 ntBASIC15.17■□□□□ 0.02
SfswapQ3USH5 Add2-202ENSMUST00000203196 1970 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
SfswapQ3USH5 Qsox1-202ENSMUST00000111764 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
SfswapQ3USH5 Trappc2l-201ENSMUST00000015157 1659 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
SfswapQ3USH5 Bscl2-203ENSMUST00000159634 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
SfswapQ3USH5 Ptk2-201ENSMUST00000110036 4184 ntAPPRIS P2 TSL 1 (best) BASIC15.16■□□□□ 0.02
SfswapQ3USH5 Gm10782-202ENSMUST00000223775 1480 ntBASIC15.16■□□□□ 0.02
SfswapQ3USH5 Baiap2l1-201ENSMUST00000055190 3247 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
SfswapQ3USH5 Metap2-206ENSMUST00000180840 2551 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
SfswapQ3USH5 Sema3d-201ENSMUST00000030868 6307 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
SfswapQ3USH5 Dppa4-201ENSMUST00000050705 1378 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
SfswapQ3USH5 Pianp-206ENSMUST00000162000 2396 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
SfswapQ3USH5 Neu2-204ENSMUST00000165109 1824 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
SfswapQ3USH5 Gm24830-201ENSMUST00000102024 166 ntBASIC15.16■□□□□ 0.02
SfswapQ3USH5 Tmsb10-201ENSMUST00000114048 623 ntAPPRIS P1 TSL 3 BASIC15.16■□□□□ 0.02
SfswapQ3USH5 Gm13813-201ENSMUST00000120998 787 ntBASIC15.16■□□□□ 0.02
SfswapQ3USH5 Gm11791-201ENSMUST00000139327 336 ntTSL 3 BASIC15.16■□□□□ 0.02
SfswapQ3USH5 Gm14809-201ENSMUST00000152025 695 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
SfswapQ3USH5 Gm25890-201ENSMUST00000177643 165 ntBASIC15.16■□□□□ 0.02
SfswapQ3USH5 Rnu1b2-201ENSMUST00000178073 165 ntBASIC15.16■□□□□ 0.02
SfswapQ3USH5 Rnu1b1-201ENSMUST00000178250 165 ntBASIC15.16■□□□□ 0.02
SfswapQ3USH5 Gm22614-201ENSMUST00000178300 165 ntBASIC15.16■□□□□ 0.02
SfswapQ3USH5 Mymx-203ENSMUST00000178858 804 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
SfswapQ3USH5 D930030I03Rik-201ENSMUST00000180735 920 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
SfswapQ3USH5 Calca-204ENSMUST00000205714 416 ntTSL 2 BASIC15.16■□□□□ 0.02
SfswapQ3USH5 1700011D18Rik-201ENSMUST00000205762 277 ntBASIC15.16■□□□□ 0.02
SfswapQ3USH5 Gm44967-201ENSMUST00000207047 631 ntBASIC15.16■□□□□ 0.02
SfswapQ3USH5 4930447K03Rik-201ENSMUST00000222745 1033 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
SfswapQ3USH5 Ssc4d-201ENSMUST00000054895 1191 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
SfswapQ3USH5 Olfr156-202ENSMUST00000079465 1099 ntAPPRIS P1 BASIC15.16■□□□□ 0.02
SfswapQ3USH5 Gm22042-201ENSMUST00000082989 165 ntBASIC15.16■□□□□ 0.02
SfswapQ3USH5 Gm26232-201ENSMUST00000083360 166 ntBASIC15.16■□□□□ 0.02
SfswapQ3USH5 Gm24136-201ENSMUST00000083374 165 ntBASIC15.16■□□□□ 0.02
SfswapQ3USH5 Rnu1b6-201ENSMUST00000083839 166 ntBASIC15.16■□□□□ 0.02
SfswapQ3USH5 Gm26110-201ENSMUST00000083971 165 ntBASIC15.16■□□□□ 0.02
SfswapQ3USH5 Nrf1-210ENSMUST00000115211 3295 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
SfswapQ3USH5 Abcc6-201ENSMUST00000002850 4974 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
SfswapQ3USH5 Ncor2-203ENSMUST00000111393 8661 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
SfswapQ3USH5 Plch2-206ENSMUST00000135665 4349 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
SfswapQ3USH5 Tbx3-203ENSMUST00000121021 4777 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
SfswapQ3USH5 Fgfr1-203ENSMUST00000119398 3789 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
SfswapQ3USH5 Col20a1-205ENSMUST00000228434 5012 ntAPPRIS P2 BASIC15.16■□□□□ 0.02
SfswapQ3USH5 Eprs-201ENSMUST00000046514 4906 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
SfswapQ3USH5 Pcdhgb8-202ENSMUST00000208907 2796 ntAPPRIS P2 TSL 1 (best) BASIC15.16■□□□□ 0.02
SfswapQ3USH5 Gm36995-201ENSMUST00000126170 5727 ntTSL 2 BASIC15.16■□□□□ 0.02
SfswapQ3USH5 Nudt18-201ENSMUST00000089049 3926 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
SfswapQ3USH5 Aff4-201ENSMUST00000060945 10099 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
SfswapQ3USH5 Abhd18-202ENSMUST00000108078 2492 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
SfswapQ3USH5 Gm45765-202ENSMUST00000212921 1313 ntTSL 5 BASIC15.16■□□□□ 0.02
SfswapQ3USH5 Edc3-201ENSMUST00000043990 5708 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
SfswapQ3USH5 Kifc1-204ENSMUST00000173492 2350 ntAPPRIS P2 TSL 1 (best) BASIC15.16■□□□□ 0.02
SfswapQ3USH5 Rasl12-201ENSMUST00000085453 2390 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
SfswapQ3USH5 Nmbr-201ENSMUST00000020015 1599 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
SfswapQ3USH5 Gm36356-201ENSMUST00000209224 2277 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
SfswapQ3USH5 Ctbs-201ENSMUST00000029840 2629 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
SfswapQ3USH5 Hp1bp3-201ENSMUST00000030541 3311 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
SfswapQ3USH5 Zfp108-201ENSMUST00000072713 1929 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
SfswapQ3USH5 Cacna1g-203ENSMUST00000103166 8104 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
SfswapQ3USH5 Gm26577-201ENSMUST00000180680 2184 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
SfswapQ3USH5 Lgals8-202ENSMUST00000099821 2792 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
SfswapQ3USH5 Clcn4-203ENSMUST00000210061 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
SfswapQ3USH5 Zeb2-211ENSMUST00000153561 2070 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
SfswapQ3USH5 Chchd3-202ENSMUST00000115091 1363 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
SfswapQ3USH5 Sept12-201ENSMUST00000170323 2576 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
SfswapQ3USH5 Zfp207-201ENSMUST00000017567 2245 ntAPPRIS ALT1 TSL 1 (best) BASIC15.15■□□□□ 0.02
SfswapQ3USH5 Gm26819-201ENSMUST00000180656 5128 ntTSL 5 BASIC15.15■□□□□ 0.02
SfswapQ3USH5 Zfp346-201ENSMUST00000021937 3333 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
SfswapQ3USH5 Itk-202ENSMUST00000101306 1185 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
SfswapQ3USH5 Gm29054-201ENSMUST00000187589 1185 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
SfswapQ3USH5 Rpl7a-ps10-201ENSMUST00000190579 798 ntBASIC15.15■□□□□ 0.02
SfswapQ3USH5 Gm37201-201ENSMUST00000191845 523 ntBASIC15.15■□□□□ 0.02
SfswapQ3USH5 Gm37466-201ENSMUST00000195692 652 ntBASIC15.15■□□□□ 0.02
SfswapQ3USH5 Brsk1-205ENSMUST00000206024 1216 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
SfswapQ3USH5 Syngr4-201ENSMUST00000039049 967 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
SfswapQ3USH5 Rpl7a-ps3-201ENSMUST00000090170 796 ntBASIC15.15■□□□□ 0.02
SfswapQ3USH5 Rpl7a-ps5-201ENSMUST00000095218 807 ntAPPRIS P1 BASIC15.15■□□□□ 0.02
SfswapQ3USH5 Prss23-201ENSMUST00000041761 3228 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
SfswapQ3USH5 CT010488.1-201ENSMUST00000214890 1522 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
SfswapQ3USH5 Rgs12-202ENSMUST00000087684 4713 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
SfswapQ3USH5 Igha-202ENSMUST00000194738 2540 ntAPPRIS P5 BASIC15.15■□□□□ 0.02
SfswapQ3USH5 Arhgef39-201ENSMUST00000054538 1659 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
SfswapQ3USH5 Def8-203ENSMUST00000093049 1909 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
SfswapQ3USH5 Tcf4-249ENSMUST00000202435 2427 ntTSL 5 BASIC15.15■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 49.7 ms