Protein–RNA interactions for Protein: Q3UPR0

Shisa3, Protein shisa-3 homolog, mousemouse

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shisa3Q3UPR0 Tcf25-201ENSMUST00000057934 2738 ntAPPRIS P3 TSL 1 (best) BASIC11.04□□□□□ -0.64
Shisa3Q3UPR0 Asap1-218ENSMUST00000177374 4582 ntAPPRIS P3 TSL 1 (best) BASIC11.04□□□□□ -0.64
Shisa3Q3UPR0 Camsap3-202ENSMUST00000171962 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC11.04□□□□□ -0.64
Shisa3Q3UPR0 Ttc17-202ENSMUST00000094801 3408 ntTSL 5 BASIC11.04□□□□□ -0.64
Shisa3Q3UPR0 Fam171a1-201ENSMUST00000062934 4129 ntAPPRIS ALT2 TSL 1 (best) BASIC11.04□□□□□ -0.64
Shisa3Q3UPR0 Dctn2-201ENSMUST00000026479 1784 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Shisa3Q3UPR0 Adam22-203ENSMUST00000088744 9245 ntAPPRIS ALT2 TSL 5 BASIC11.04□□□□□ -0.64
Shisa3Q3UPR0 Cd63-202ENSMUST00000105229 1043 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Shisa3Q3UPR0 Gm13263-201ENSMUST00000121271 838 ntBASIC11.04□□□□□ -0.64
Shisa3Q3UPR0 A530058N18Rik-202ENSMUST00000134129 411 ntTSL 3 BASIC11.04□□□□□ -0.64
Shisa3Q3UPR0 Gnb2-209ENSMUST00000143495 1285 ntTSL 5 BASIC11.04□□□□□ -0.64
Shisa3Q3UPR0 Sox5it-201ENSMUST00000144026 1207 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Shisa3Q3UPR0 Sec14l4-201ENSMUST00000019512 2956 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Shisa3Q3UPR0 Myl10-204ENSMUST00000197186 607 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Shisa3Q3UPR0 Olfr1460-ps1-201ENSMUST00000208975 899 ntBASIC11.04□□□□□ -0.64
Shisa3Q3UPR0 E330011O21Rik-205ENSMUST00000211317 1062 ntTSL 5 BASIC11.04□□□□□ -0.64
Shisa3Q3UPR0 Cd63-204ENSMUST00000219317 1109 ntAPPRIS P1 TSL 5 BASIC11.04□□□□□ -0.64
Shisa3Q3UPR0 Fthl17c-201ENSMUST00000075792 850 ntAPPRIS P1 BASIC11.04□□□□□ -0.64
Shisa3Q3UPR0 Gm10244-201ENSMUST00000090237 830 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Shisa3Q3UPR0 6430531B16Rik-201ENSMUST00000097970 1161 ntAPPRIS P3 TSL 1 (best) BASIC11.04□□□□□ -0.64
Shisa3Q3UPR0 Art3-208ENSMUST00000121096 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC11.04□□□□□ -0.64
Shisa3Q3UPR0 Tbx4-203ENSMUST00000108047 3153 ntAPPRIS P1 TSL 5 BASIC11.04□□□□□ -0.64
Shisa3Q3UPR0 Trak1-213ENSMUST00000211439 3533 ntAPPRIS ALT2 TSL 1 (best) BASIC11.04□□□□□ -0.64
Shisa3Q3UPR0 Tcf4-238ENSMUST00000201631 2660 ntTSL 5 BASIC11.04□□□□□ -0.64
Shisa3Q3UPR0 Gm11766-201ENSMUST00000143428 3018 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Shisa3Q3UPR0 Eogt-201ENSMUST00000054344 4424 ntAPPRIS P2 TSL 1 (best) BASIC11.04□□□□□ -0.64
Shisa3Q3UPR0 Gm14243-201ENSMUST00000131401 2172 ntTSL 2 BASIC11.04□□□□□ -0.64
Shisa3Q3UPR0 Gab3-201ENSMUST00000037374 2153 ntAPPRIS P2 TSL 1 (best) BASIC11.04□□□□□ -0.64
Shisa3Q3UPR0 Bbs4-201ENSMUST00000026265 2518 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Shisa3Q3UPR0 Cdc25a-204ENSMUST00000198308 2880 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Shisa3Q3UPR0 Arid3a-201ENSMUST00000019708 5361 ntAPPRIS P3 TSL 1 (best) BASIC11.04□□□□□ -0.64
Shisa3Q3UPR0 Shisa9-201ENSMUST00000023138 4326 ntAPPRIS ALT2 TSL 1 (best) BASIC11.04□□□□□ -0.64
Shisa3Q3UPR0 Nt5c3b-203ENSMUST00000107397 1348 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Shisa3Q3UPR0 Gtf2ird1-207ENSMUST00000111245 3299 ntAPPRIS ALT2 TSL 1 (best) BASIC11.04□□□□□ -0.64
Shisa3Q3UPR0 Shc1-201ENSMUST00000039110 3250 ntAPPRIS P3 TSL 1 (best) BASIC11.04□□□□□ -0.64
Shisa3Q3UPR0 Tor3a-201ENSMUST00000079625 3285 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Shisa3Q3UPR0 Ptcd3-201ENSMUST00000082094 2581 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Shisa3Q3UPR0 Gm14149-201ENSMUST00000123048 1853 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Shisa3Q3UPR0 Sntb1-201ENSMUST00000039769 4919 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Shisa3Q3UPR0 Git2-202ENSMUST00000086564 2984 ntAPPRIS P1 TSL 5 BASIC11.04□□□□□ -0.64
Shisa3Q3UPR0 Tcf12-201ENSMUST00000034755 4621 ntAPPRIS ALT1 TSL 5 BASIC11.04□□□□□ -0.64
Shisa3Q3UPR0 Gad2-201ENSMUST00000028123 5744 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Shisa3Q3UPR0 Zmat1-202ENSMUST00000113185 3378 ntAPPRIS ALT2 TSL 5 BASIC11.03□□□□□ -0.64
Shisa3Q3UPR0 Src-201ENSMUST00000029175 3906 ntAPPRIS P1 TSL 5 BASIC11.03□□□□□ -0.64
Shisa3Q3UPR0 Zfp426-202ENSMUST00000115562 3557 ntAPPRIS P3 TSL 1 (best) BASIC11.03□□□□□ -0.64
Shisa3Q3UPR0 Tspan14-201ENSMUST00000047652 2475 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Shisa3Q3UPR0 Sp3-202ENSMUST00000102689 4181 ntAPPRIS P2 TSL 1 (best) BASIC11.03□□□□□ -0.64
Shisa3Q3UPR0 Slc35f6-205ENSMUST00000196740 1972 ntTSL 5 BASIC11.03□□□□□ -0.64
Shisa3Q3UPR0 Fyb2-201ENSMUST00000106803 3136 ntAPPRIS P2 TSL 1 (best) BASIC11.03□□□□□ -0.64
Shisa3Q3UPR0 Traf7-201ENSMUST00000070777 2384 ntTSL 5 BASIC11.03□□□□□ -0.64
Shisa3Q3UPR0 Tmem136-201ENSMUST00000061833 3503 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Shisa3Q3UPR0 Med1-202ENSMUST00000092735 2627 ntAPPRIS ALT2 TSL 1 (best) BASIC11.03□□□□□ -0.64
Shisa3Q3UPR0 Gm12439-201ENSMUST00000117162 365 ntBASIC11.03□□□□□ -0.64
Shisa3Q3UPR0 Gm15074-201ENSMUST00000117603 936 ntBASIC11.03□□□□□ -0.64
Shisa3Q3UPR0 Snap47-202ENSMUST00000120940 1192 ntAPPRIS ALT2 TSL 1 (best) BASIC11.03□□□□□ -0.64
Shisa3Q3UPR0 Gm28050-201ENSMUST00000124394 449 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Shisa3Q3UPR0 1700121C08Rik-201ENSMUST00000137546 677 ntTSL 3 BASIC11.03□□□□□ -0.64
Shisa3Q3UPR0 9030204H09Rik-201ENSMUST00000139455 653 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Shisa3Q3UPR0 Gm13850-201ENSMUST00000140465 623 ntTSL 3 BASIC11.03□□□□□ -0.64
Shisa3Q3UPR0 Gm5354-201ENSMUST00000182417 973 ntBASIC11.03□□□□□ -0.64
Shisa3Q3UPR0 H2-Pa-201ENSMUST00000182803 626 ntBASIC11.03□□□□□ -0.64
Shisa3Q3UPR0 Mir124-2hg-207ENSMUST00000189868 535 ntTSL 2 BASIC11.03□□□□□ -0.64
Shisa3Q3UPR0 Gm28745-201ENSMUST00000190069 305 ntBASIC11.03□□□□□ -0.64
Shisa3Q3UPR0 Gm29608-201ENSMUST00000190444 463 ntBASIC11.03□□□□□ -0.64
Shisa3Q3UPR0 2410004P03Rik-203ENSMUST00000190691 953 ntTSL 2 BASIC11.03□□□□□ -0.64
Shisa3Q3UPR0 Gm9723-201ENSMUST00000192100 457 ntBASIC11.03□□□□□ -0.64
Shisa3Q3UPR0 Gm37917-201ENSMUST00000194711 392 ntBASIC11.03□□□□□ -0.64
Shisa3Q3UPR0 Gm19080-201ENSMUST00000196082 550 ntBASIC11.03□□□□□ -0.64
Shisa3Q3UPR0 Gm43037-201ENSMUST00000196808 250 ntBASIC11.03□□□□□ -0.64
Shisa3Q3UPR0 Gm35549-203ENSMUST00000204619 644 ntAPPRIS P1 TSL 5 BASIC11.03□□□□□ -0.64
Shisa3Q3UPR0 Gm19220-201ENSMUST00000222682 803 ntBASIC11.03□□□□□ -0.64
Shisa3Q3UPR0 AC125539.1-201ENSMUST00000227423 622 ntBASIC11.03□□□□□ -0.64
Shisa3Q3UPR0 AC106830.1-201ENSMUST00000228032 1003 ntBASIC11.03□□□□□ -0.64
Shisa3Q3UPR0 Uqcr10-201ENSMUST00000058407 434 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Shisa3Q3UPR0 Gm24447-201ENSMUST00000083977 338 ntBASIC11.03□□□□□ -0.64
Shisa3Q3UPR0 Mpv17-202ENSMUST00000200744 1653 ntTSL 2 BASIC11.03□□□□□ -0.64
Shisa3Q3UPR0 Plch2-210ENSMUST00000176194 5619 ntAPPRIS ALT2 TSL 5 BASIC11.03□□□□□ -0.64
Shisa3Q3UPR0 Misp-202ENSMUST00000169041 2497 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Shisa3Q3UPR0 Gdpd2-201ENSMUST00000019503 2495 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Shisa3Q3UPR0 Tgfbr1-202ENSMUST00000044234 2861 ntAPPRIS ALT2 TSL 1 (best) BASIC11.03□□□□□ -0.64
Shisa3Q3UPR0 Rnf180-205ENSMUST00000226044 3279 ntAPPRIS ALT2 BASIC11.03□□□□□ -0.64
Shisa3Q3UPR0 Rnf40-202ENSMUST00000205694 5279 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Shisa3Q3UPR0 Gm26857-201ENSMUST00000181580 3347 ntTSL 5 BASIC11.03□□□□□ -0.64
Shisa3Q3UPR0 Mrc2-201ENSMUST00000021038 3335 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Shisa3Q3UPR0 Trim46-202ENSMUST00000090924 2721 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Shisa3Q3UPR0 4930428O21Rik-201ENSMUST00000198537 1740 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Shisa3Q3UPR0 Syngr2-201ENSMUST00000026649 1520 ntAPPRIS P2 TSL 1 (best) BASIC11.03□□□□□ -0.64
Shisa3Q3UPR0 Chmp5-201ENSMUST00000030128 1519 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Shisa3Q3UPR0 Fktn-204ENSMUST00000221657 6241 ntTSL 5 BASIC11.03□□□□□ -0.64
Shisa3Q3UPR0 Nlrx1-202ENSMUST00000168499 3579 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Shisa3Q3UPR0 Wdr89-201ENSMUST00000062370 2979 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Shisa3Q3UPR0 Clca2-203ENSMUST00000198993 2774 ntAPPRIS ALT2 TSL 1 (best) BASIC11.03□□□□□ -0.64
Shisa3Q3UPR0 Ikbip-201ENSMUST00000020149 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC11.03□□□□□ -0.64
Shisa3Q3UPR0 Hdac5-201ENSMUST00000008999 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC11.03□□□□□ -0.64
Shisa3Q3UPR0 Alpk3-201ENSMUST00000107348 6369 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Shisa3Q3UPR0 Acoxl-202ENSMUST00000110344 1573 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Shisa3Q3UPR0 BC024139-201ENSMUST00000054022 2623 ntAPPRIS P2 TSL 1 (best) BASIC11.03□□□□□ -0.64
Shisa3Q3UPR0 Gm9530-201ENSMUST00000181160 3281 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Shisa3Q3UPR0 Prx-203ENSMUST00000108355 5433 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
Shisa3Q3UPR0 Hcls1-201ENSMUST00000023531 2016 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
Retrieved 100 of 76,532 protein–RNA pairs in 43 ms