Protein–RNA interactions for Protein: Q3UP24

Nlrc4, NLR family CARD domain-containing protein 4, mousemouse

Predictions only

Length 1,024 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nlrc4Q3UP24 Fancc-218ENSMUST00000220684 2006 ntTSL 5 BASIC13.42□□□□□ -0.26
Nlrc4Q3UP24 Eps8l3-201ENSMUST00000037375 2271 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Nlrc4Q3UP24 Xpr1-203ENSMUST00000111775 4094 ntTSL 5 BASIC13.42□□□□□ -0.26
Nlrc4Q3UP24 4933439K11Rik-203ENSMUST00000169111 1869 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Nlrc4Q3UP24 F7-201ENSMUST00000033820 1859 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Nlrc4Q3UP24 Zfp385c-201ENSMUST00000103119 2766 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Nlrc4Q3UP24 Pitpnm2-205ENSMUST00000161273 6792 ntAPPRIS ALT2 TSL 5 BASIC13.42□□□□□ -0.26
Nlrc4Q3UP24 Ccdc22-201ENSMUST00000033483 2353 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Nlrc4Q3UP24 Gpr18-201ENSMUST00000055475 1498 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Nlrc4Q3UP24 Gtf2f1-201ENSMUST00000002733 1717 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Nlrc4Q3UP24 Mier3-203ENSMUST00000109272 5279 ntAPPRIS P2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Nlrc4Q3UP24 Acap1-201ENSMUST00000001631 2482 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Nlrc4Q3UP24 Apaf1-207ENSMUST00000161987 2710 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Nlrc4Q3UP24 Egfl7-201ENSMUST00000100290 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Nlrc4Q3UP24 Rnf214-201ENSMUST00000058720 3964 ntAPPRIS P3 TSL 1 (best) BASIC13.41□□□□□ -0.26
Nlrc4Q3UP24 Timp3-201ENSMUST00000020234 4722 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Nlrc4Q3UP24 Camsap3-202ENSMUST00000171962 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Nlrc4Q3UP24 Map6-201ENSMUST00000068973 3430 ntAPPRIS P3 TSL 1 (best) BASIC13.41□□□□□ -0.26
Nlrc4Q3UP24 Cyp1a2-201ENSMUST00000034860 1940 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Nlrc4Q3UP24 Polr2a-202ENSMUST00000071213 5799 ntTSL 5 BASIC13.41□□□□□ -0.26
Nlrc4Q3UP24 Zfp108-201ENSMUST00000072713 1929 ntAPPRIS ALT2 TSL 5 BASIC13.41□□□□□ -0.26
Nlrc4Q3UP24 Gm26588-202ENSMUST00000181355 2538 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Nlrc4Q3UP24 Map1lc3b-201ENSMUST00000034270 2532 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Nlrc4Q3UP24 Phka1-203ENSMUST00000113611 6064 ntAPPRIS ALT2 TSL 5 BASIC13.41□□□□□ -0.26
Nlrc4Q3UP24 Phka1-205ENSMUST00000120270 6064 ntAPPRIS ALT2 TSL 5 BASIC13.41□□□□□ -0.26
Nlrc4Q3UP24 Ralgds-202ENSMUST00000100241 3102 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Nlrc4Q3UP24 Nox3-201ENSMUST00000115800 1792 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Nlrc4Q3UP24 Banp-210ENSMUST00000173254 1521 ntAPPRIS P1 TSL 5 BASIC13.41□□□□□ -0.26
Nlrc4Q3UP24 Pcdha11-203ENSMUST00000192447 4583 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Nlrc4Q3UP24 Gm21964-203ENSMUST00000219454 1513 ntAPPRIS P5 TSL 5 BASIC13.41□□□□□ -0.26
Nlrc4Q3UP24 E230020A03Rik-201ENSMUST00000194646 2386 ntBASIC13.41□□□□□ -0.26
Nlrc4Q3UP24 Hist1h4b-201ENSMUST00000102965 397 ntAPPRIS P1 BASIC13.41□□□□□ -0.26
Nlrc4Q3UP24 Irf1-202ENSMUST00000108920 2137 ntAPPRIS P3 TSL 1 (best) BASIC13.41□□□□□ -0.26
Nlrc4Q3UP24 Gm5940-201ENSMUST00000117582 1068 ntBASIC13.41□□□□□ -0.26
Nlrc4Q3UP24 Gm44414-201ENSMUST00000203660 2109 ntBASIC13.41□□□□□ -0.26
Nlrc4Q3UP24 Gm45437-201ENSMUST00000209998 448 ntTSL 3 BASIC13.41□□□□□ -0.26
Nlrc4Q3UP24 Gm45720-201ENSMUST00000211881 484 ntTSL 3 BASIC13.41□□□□□ -0.26
Nlrc4Q3UP24 Gm7399-201ENSMUST00000032395 858 ntBASIC13.41□□□□□ -0.26
Nlrc4Q3UP24 Asb9-201ENSMUST00000033756 1139 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Nlrc4Q3UP24 4930442H23Rik-201ENSMUST00000056086 1245 ntAPPRIS P1 BASIC13.41□□□□□ -0.26
Nlrc4Q3UP24 Gm22058-201ENSMUST00000083393 310 ntBASIC13.41□□□□□ -0.26
Nlrc4Q3UP24 Rnf40-202ENSMUST00000205694 5279 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Nlrc4Q3UP24 Rpe-202ENSMUST00000113995 2713 ntTSL 3 BASIC13.41□□□□□ -0.26
Nlrc4Q3UP24 Ercc5-201ENSMUST00000027214 3907 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Nlrc4Q3UP24 Slc30a3-206ENSMUST00000202740 1989 ntTSL 5 BASIC13.41□□□□□ -0.26
Nlrc4Q3UP24 Hrg-201ENSMUST00000023590 1734 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Nlrc4Q3UP24 Tspyl3-201ENSMUST00000099194 3072 ntAPPRIS P1 BASIC13.41□□□□□ -0.26
Nlrc4Q3UP24 Gzf1-201ENSMUST00000028928 4232 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Nlrc4Q3UP24 Tbc1d9b-201ENSMUST00000093138 4407 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
Nlrc4Q3UP24 4931440F15Rik-201ENSMUST00000104962 3274 ntAPPRIS P1 BASIC13.4□□□□□ -0.26
Nlrc4Q3UP24 Gm27194-201ENSMUST00000175753 2936 ntBASIC13.4□□□□□ -0.26
Nlrc4Q3UP24 Gm7114-201ENSMUST00000190159 1789 ntBASIC13.4□□□□□ -0.26
Nlrc4Q3UP24 Xylb-201ENSMUST00000039610 3383 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Nlrc4Q3UP24 Trpv1-201ENSMUST00000006106 2340 ntAPPRIS ALT2 TSL 5 BASIC13.4□□□□□ -0.26
Nlrc4Q3UP24 Cecr2-202ENSMUST00000112686 9212 ntAPPRIS P2 TSL 5 BASIC13.4□□□□□ -0.26
Nlrc4Q3UP24 Nynrin-202ENSMUST00000168479 7511 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.26
Nlrc4Q3UP24 C530008M17Rik-202ENSMUST00000120639 6826 ntAPPRIS P2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Nlrc4Q3UP24 C530008M17Rik-211ENSMUST00000163347 6835 ntAPPRIS P2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Nlrc4Q3UP24 Luc7l2-207ENSMUST00000161227 2405 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Nlrc4Q3UP24 B4galnt3-203ENSMUST00000212457 2958 ntAPPRIS ALT2 TSL 5 BASIC13.4□□□□□ -0.26
Nlrc4Q3UP24 Gm13293-201ENSMUST00000131188 1615 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Nlrc4Q3UP24 Arcn1-201ENSMUST00000034607 4072 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Nlrc4Q3UP24 Armc8-201ENSMUST00000035043 4647 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Nlrc4Q3UP24 4930428O21Rik-201ENSMUST00000198537 1740 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Nlrc4Q3UP24 Khdrbs2-205ENSMUST00000189878 3259 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Nlrc4Q3UP24 Esr2-201ENSMUST00000076634 3288 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Nlrc4Q3UP24 Xndc1-201ENSMUST00000094130 2298 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Nlrc4Q3UP24 0610010K14Rik-203ENSMUST00000100950 545 ntTSL 2 BASIC13.4□□□□□ -0.26
Nlrc4Q3UP24 1700049J03Rik-201ENSMUST00000011196 421 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Nlrc4Q3UP24 Gm13786-201ENSMUST00000122371 333 ntBASIC13.4□□□□□ -0.26
Nlrc4Q3UP24 Myl3-203ENSMUST00000136695 614 ntAPPRIS ALT2 TSL 3 BASIC13.4□□□□□ -0.26
Nlrc4Q3UP24 Pisd-ps1-203ENSMUST00000145164 789 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Nlrc4Q3UP24 1700066O22Rik-203ENSMUST00000150994 961 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Nlrc4Q3UP24 Gm12349-201ENSMUST00000153030 657 ntTSL 3 BASIC13.4□□□□□ -0.26
Nlrc4Q3UP24 Cabp2-202ENSMUST00000159556 781 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Nlrc4Q3UP24 4833427G06Rik-201ENSMUST00000170947 973 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Nlrc4Q3UP24 Gm27501-201ENSMUST00000183599 107 ntBASIC13.4□□□□□ -0.26
Nlrc4Q3UP24 1500004A13Rik-208ENSMUST00000184958 823 ntTSL 3 BASIC13.4□□□□□ -0.26
Nlrc4Q3UP24 Gm44974-201ENSMUST00000206387 1279 ntBASIC13.4□□□□□ -0.26
Nlrc4Q3UP24 Olfr284-202ENSMUST00000206647 966 ntBASIC13.4□□□□□ -0.26
Nlrc4Q3UP24 Dnpep-203ENSMUST00000185419 2833 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Nlrc4Q3UP24 Fgfr1-201ENSMUST00000084027 5025 ntAPPRIS P3 TSL 5 BASIC13.4□□□□□ -0.26
Nlrc4Q3UP24 Gm26799-201ENSMUST00000180959 1361 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Nlrc4Q3UP24 Rgs11-202ENSMUST00000122058 2005 ntAPPRIS ALT2 TSL 2 BASIC13.4□□□□□ -0.26
Nlrc4Q3UP24 Ppm1b-204ENSMUST00000112307 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Nlrc4Q3UP24 Gm36745-201ENSMUST00000213455 1594 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Nlrc4Q3UP24 Gm44241-201ENSMUST00000203230 1662 ntBASIC13.4□□□□□ -0.26
Nlrc4Q3UP24 Il2rg-201ENSMUST00000033664 1670 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Nlrc4Q3UP24 Gm43858-201ENSMUST00000199418 1778 ntBASIC13.4□□□□□ -0.26
Nlrc4Q3UP24 Stox2-201ENSMUST00000079195 10467 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Nlrc4Q3UP24 Efr3a-205ENSMUST00000173858 2848 ntTSL 1 (best) BASIC13.4□□□□□ -0.27
Nlrc4Q3UP24 Olfr533-206ENSMUST00000217179 2825 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.27
Nlrc4Q3UP24 Bcas3-201ENSMUST00000074875 2814 ntAPPRIS P3 TSL 5 BASIC13.4□□□□□ -0.27
Nlrc4Q3UP24 Nr3c1-203ENSMUST00000115567 6436 ntAPPRIS P2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Nlrc4Q3UP24 AC116503.1-201ENSMUST00000215445 2192 ntBASIC13.39□□□□□ -0.27
Nlrc4Q3UP24 Ccdc187-201ENSMUST00000057224 3148 ntAPPRIS P2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Nlrc4Q3UP24 Usp16-201ENSMUST00000026710 3205 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Nlrc4Q3UP24 Slc39a8-201ENSMUST00000029810 3203 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Nlrc4Q3UP24 Gm7789-202ENSMUST00000211273 1400 ntBASIC13.39□□□□□ -0.27
Nlrc4Q3UP24 Abcg5-201ENSMUST00000066175 2351 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 34 ms