Protein–RNA interactions for Protein: Q3UAW9

Brf2, Transcription factor IIIB 50 kDa subunit, mousemouse

Predictions only

Length 420 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Brf2Q3UAW9 Marco-201ENSMUST00000027639 1925 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Brf2Q3UAW9 Mdm4-201ENSMUST00000067398 1914 ntAPPRIS ALT1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Brf2Q3UAW9 CT009713.10-201ENSMUST00000225013 1986 ntBASIC12.01□□□□□ -0.49
Brf2Q3UAW9 Acta1-201ENSMUST00000034453 1446 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Brf2Q3UAW9 Ctps2-206ENSMUST00000112303 3289 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Brf2Q3UAW9 Limch1-204ENSMUST00000118242 5050 ntAPPRIS ALT2 TSL 5 BASIC12.01□□□□□ -0.49
Brf2Q3UAW9 Odf3-202ENSMUST00000106049 1509 ntTSL 5 BASIC12.01□□□□□ -0.49
Brf2Q3UAW9 Rnaseh2a-210ENSMUST00000147812 1532 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
Brf2Q3UAW9 Syngr2-201ENSMUST00000026649 1520 ntAPPRIS P2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Brf2Q3UAW9 AI597479-201ENSMUST00000010434 3458 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Brf2Q3UAW9 Dock11-201ENSMUST00000033419 6665 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Brf2Q3UAW9 Ttyh1-202ENSMUST00000079415 2882 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Brf2Q3UAW9 Pik3cd-206ENSMUST00000122059 4832 ntAPPRIS ALT1 TSL 1 (best) BASIC12□□□□□ -0.49
Brf2Q3UAW9 Glis2-201ENSMUST00000014447 3619 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Brf2Q3UAW9 Tars2-202ENSMUST00000074339 2313 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Brf2Q3UAW9 Sh3bp5l-202ENSMUST00000116376 3016 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Brf2Q3UAW9 Smpd4-206ENSMUST00000163997 1722 ntTSL 5 BASIC12□□□□□ -0.49
Brf2Q3UAW9 Esrp1-203ENSMUST00000108311 3864 ntTSL 5 BASIC12□□□□□ -0.49
Brf2Q3UAW9 Gm26588-202ENSMUST00000181355 2538 ntTSL 1 (best) BASIC12□□□□□ -0.49
Brf2Q3UAW9 Cdkl2-203ENSMUST00000113140 2559 ntAPPRIS P4 TSL 5 BASIC12□□□□□ -0.49
Brf2Q3UAW9 Gba-202ENSMUST00000167998 1938 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Brf2Q3UAW9 Tmem186-201ENSMUST00000052505 2736 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Brf2Q3UAW9 Rapgef6-202ENSMUST00000101206 5864 ntAPPRIS ALT2 TSL 5 BASIC12□□□□□ -0.49
Brf2Q3UAW9 Tmem39a-201ENSMUST00000002924 2871 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Brf2Q3UAW9 Palld-204ENSMUST00000121785 6349 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Brf2Q3UAW9 Psme2b-201ENSMUST00000104958 837 ntAPPRIS P1 BASIC12□□□□□ -0.49
Brf2Q3UAW9 Cacnb2-202ENSMUST00000114719 2117 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Brf2Q3UAW9 Drap1-209ENSMUST00000136579 734 ntTSL 2 BASIC12□□□□□ -0.49
Brf2Q3UAW9 Ndufa2-201ENSMUST00000014438 572 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Brf2Q3UAW9 Borcs5-202ENSMUST00000166591 792 ntTSL 2 BASIC12□□□□□ -0.49
Brf2Q3UAW9 Gm22121-201ENSMUST00000175148 54 ntBASIC12□□□□□ -0.49
Brf2Q3UAW9 Gm27847-201ENSMUST00000183711 107 ntBASIC12□□□□□ -0.49
Brf2Q3UAW9 Gm27375-201ENSMUST00000183799 107 ntBASIC12□□□□□ -0.49
Brf2Q3UAW9 Gm5896-201ENSMUST00000189662 1024 ntBASIC12□□□□□ -0.49
Brf2Q3UAW9 Ociad1-210ENSMUST00000202250 800 ntTSL 2 BASIC12□□□□□ -0.49
Brf2Q3UAW9 Gm29705-201ENSMUST00000212598 474 ntBASIC12□□□□□ -0.49
Brf2Q3UAW9 AC156504.2-201ENSMUST00000213800 711 ntTSL 1 (best) BASIC12□□□□□ -0.49
Brf2Q3UAW9 Gm7653-201ENSMUST00000214567 508 ntBASIC12□□□□□ -0.49
Brf2Q3UAW9 Nup37-201ENSMUST00000052355 1267 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Brf2Q3UAW9 Ldhb-201ENSMUST00000032373 1304 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Brf2Q3UAW9 Gm10544-201ENSMUST00000180516 2239 ntTSL 1 (best) BASIC12□□□□□ -0.49
Brf2Q3UAW9 Kcnc1-203ENSMUST00000160433 3156 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Brf2Q3UAW9 AC125108.1-201ENSMUST00000218986 2330 ntBASIC12□□□□□ -0.49
Brf2Q3UAW9 Gm20687-203ENSMUST00000185121 4242 ntTSL 2 BASIC12□□□□□ -0.49
Brf2Q3UAW9 Dlgap4-201ENSMUST00000000094 1411 ntTSL 5 BASIC12□□□□□ -0.49
Brf2Q3UAW9 Epb41l5-201ENSMUST00000027632 2523 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Brf2Q3UAW9 Ccdc30-202ENSMUST00000063642 2534 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Brf2Q3UAW9 Samd4-201ENSMUST00000022386 4564 ntAPPRIS P4 TSL 1 (best) BASIC12□□□□□ -0.49
Brf2Q3UAW9 Ptn-202ENSMUST00000201321 2558 ntTSL 1 (best) BASIC12□□□□□ -0.49
Brf2Q3UAW9 Tmem17-201ENSMUST00000059319 1568 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Brf2Q3UAW9 Phrf1-202ENSMUST00000122143 4864 ntTSL 1 (best) BASIC12□□□□□ -0.49
Brf2Q3UAW9 Mettl17-201ENSMUST00000047899 1623 ntAPPRIS P2 TSL 1 (best) BASIC12□□□□□ -0.49
Brf2Q3UAW9 Igf1-203ENSMUST00000105300 1673 ntTSL 1 (best) BASIC12□□□□□ -0.49
Brf2Q3UAW9 Pdxdc1-204ENSMUST00000115804 2880 ntAPPRIS P3 TSL 1 (best) BASIC12□□□□□ -0.49
Brf2Q3UAW9 Gm37660-201ENSMUST00000192754 1732 ntBASIC12□□□□□ -0.49
Brf2Q3UAW9 Gm26635-201ENSMUST00000181077 3199 ntTSL 5 BASIC12□□□□□ -0.49
Brf2Q3UAW9 Naga-201ENSMUST00000023088 1913 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Brf2Q3UAW9 Vps52-201ENSMUST00000025178 3332 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Brf2Q3UAW9 Asl-202ENSMUST00000159619 2088 ntAPPRIS P1 TSL 5 BASIC11.99□□□□□ -0.49
Brf2Q3UAW9 Rnf17-202ENSMUST00000223627 2077 ntBASIC11.99□□□□□ -0.49
Brf2Q3UAW9 Plekhd1-201ENSMUST00000140770 3535 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Brf2Q3UAW9 Gm45266-201ENSMUST00000210111 2173 ntBASIC11.99□□□□□ -0.49
Brf2Q3UAW9 Slc29a2-201ENSMUST00000025826 2472 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Brf2Q3UAW9 Rgs12-205ENSMUST00000114283 2628 ntAPPRIS ALT2 TSL 5 BASIC11.99□□□□□ -0.49
Brf2Q3UAW9 Tepsin-201ENSMUST00000026442 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Brf2Q3UAW9 Arfip1-201ENSMUST00000098990 2799 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Brf2Q3UAW9 Pkp3-201ENSMUST00000066873 2848 ntAPPRIS P3 TSL 1 (best) BASIC11.99□□□□□ -0.49
Brf2Q3UAW9 Sh3pxd2a-202ENSMUST00000111800 10380 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Brf2Q3UAW9 Atp8a1-202ENSMUST00000072971 7154 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Brf2Q3UAW9 Plce1-204ENSMUST00000182481 8357 ntAPPRIS P2 TSL 5 BASIC11.99□□□□□ -0.49
Brf2Q3UAW9 Rfx1-204ENSMUST00000211046 3677 ntAPPRIS ALT2 TSL 5 BASIC11.99□□□□□ -0.49
Brf2Q3UAW9 Rpsa-ps9-201ENSMUST00000120702 885 ntBASIC11.99□□□□□ -0.49
Brf2Q3UAW9 Aif1-206ENSMUST00000173324 875 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Brf2Q3UAW9 Mhrt-201ENSMUST00000181782 828 ntTSL 2 BASIC11.99□□□□□ -0.49
Brf2Q3UAW9 Gm27331-201ENSMUST00000183705 60 ntBASIC11.99□□□□□ -0.49
Brf2Q3UAW9 Gm37753-201ENSMUST00000192178 439 ntTSL 2 BASIC11.99□□□□□ -0.49
Brf2Q3UAW9 Upk2-201ENSMUST00000047740 1083 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Brf2Q3UAW9 Nkiras2-202ENSMUST00000051947 831 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Brf2Q3UAW9 Olfr1423-201ENSMUST00000087831 933 ntAPPRIS P1 BASIC11.99□□□□□ -0.49
Brf2Q3UAW9 Bmp3-201ENSMUST00000031278 6548 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Brf2Q3UAW9 Tmem97-201ENSMUST00000103242 1375 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Brf2Q3UAW9 Camta2-202ENSMUST00000100933 4383 ntAPPRIS ALT2 TSL 5 BASIC11.99□□□□□ -0.49
Brf2Q3UAW9 Camta2-204ENSMUST00000108545 4377 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Brf2Q3UAW9 Camta2-206ENSMUST00000120261 4398 ntTSL 5 BASIC11.99□□□□□ -0.49
Brf2Q3UAW9 Tbc1d14-205ENSMUST00000136189 4436 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Brf2Q3UAW9 Plcb2-206ENSMUST00000159756 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Brf2Q3UAW9 Cacna1c-227ENSMUST00000220022 7765 ntTSL 5 BASIC11.99□□□□□ -0.49
Brf2Q3UAW9 Sdccag8-202ENSMUST00000056773 1551 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Brf2Q3UAW9 Luc7l2-207ENSMUST00000161227 2405 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Brf2Q3UAW9 F630040K05Rik-202ENSMUST00000180558 2633 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Brf2Q3UAW9 Slc26a5-201ENSMUST00000030878 2962 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Brf2Q3UAW9 Slc25a25-201ENSMUST00000028160 3294 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Brf2Q3UAW9 Scube2-201ENSMUST00000007423 3571 ntTSL 2 BASIC11.98□□□□□ -0.49
Brf2Q3UAW9 Msh4-201ENSMUST00000005630 3325 ntAPPRIS P3 TSL 1 (best) BASIC11.98□□□□□ -0.49
Brf2Q3UAW9 Ints5-201ENSMUST00000096249 3294 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Brf2Q3UAW9 Pdp1-205ENSMUST00000108301 2635 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Brf2Q3UAW9 Plxna1-201ENSMUST00000049845 5810 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Brf2Q3UAW9 Tcf25-203ENSMUST00000211932 5002 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Brf2Q3UAW9 Sh2d7-202ENSMUST00000118413 1316 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Brf2Q3UAW9 Tmem56-204ENSMUST00000135818 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 76.5 ms