Protein–RNA interactions for Protein: Q3MI99

Ccbe1, Collagen and calcium-binding EGF domain-containing protein 1, mousemouse

Predictions only

Length 408 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccbe1Q3MI99 Spo11-202ENSMUST00000109125 1591 ntAPPRIS ALT1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Ccbe1Q3MI99 Ngly1-207ENSMUST00000224656 2329 ntAPPRIS ALT2 BASIC11.53□□□□□ -0.56
Ccbe1Q3MI99 Stxbp5l-201ENSMUST00000023526 3344 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Ccbe1Q3MI99 Cd300lg-202ENSMUST00000107163 2605 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Ccbe1Q3MI99 Nrg1-202ENSMUST00000207417 3138 ntAPPRIS ALT2 TSL 5 BASIC11.53□□□□□ -0.56
Ccbe1Q3MI99 Pappa-201ENSMUST00000084501 11027 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Ccbe1Q3MI99 Mfsd4a-204ENSMUST00000126927 2422 ntTSL 1 (best) BASIC11.52□□□□□ -0.56
Ccbe1Q3MI99 Me3-202ENSMUST00000032856 4485 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Ccbe1Q3MI99 Epm2aip1-202ENSMUST00000135807 4245 ntAPPRIS P1 TSL 2 BASIC11.52□□□□□ -0.56
Ccbe1Q3MI99 Grpel1-201ENSMUST00000031099 3528 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Ccbe1Q3MI99 Gm26770-201ENSMUST00000180586 2237 ntTSL 1 (best) BASIC11.52□□□□□ -0.56
Ccbe1Q3MI99 Wdr20rt-201ENSMUST00000046331 2228 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Ccbe1Q3MI99 Mical1-202ENSMUST00000099934 3292 ntTSL 1 (best) BASIC11.52□□□□□ -0.56
Ccbe1Q3MI99 Gm26819-201ENSMUST00000180656 5128 ntTSL 5 BASIC11.52□□□□□ -0.56
Ccbe1Q3MI99 1110051M20Rik-203ENSMUST00000102594 1977 ntAPPRIS P3 TSL 1 (best) BASIC11.52□□□□□ -0.56
Ccbe1Q3MI99 9430038I01Rik-203ENSMUST00000120340 4643 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.56
Ccbe1Q3MI99 Crx-203ENSMUST00000172758 1469 ntTSL 3 BASIC11.52□□□□□ -0.56
Ccbe1Q3MI99 Dhrs1-201ENSMUST00000002403 1477 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Ccbe1Q3MI99 Lamc3-201ENSMUST00000028187 5871 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Ccbe1Q3MI99 Ndufaf7-201ENSMUST00000024887 2303 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Ccbe1Q3MI99 Fnip2-203ENSMUST00000133154 7299 ntAPPRIS ALT2 TSL 5 BASIC11.52□□□□□ -0.57
Ccbe1Q3MI99 Pik3cd-206ENSMUST00000122059 4832 ntAPPRIS ALT1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Ccbe1Q3MI99 Polm-201ENSMUST00000020767 2924 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Ccbe1Q3MI99 Ptprm-203ENSMUST00000224091 3773 ntBASIC11.52□□□□□ -0.57
Ccbe1Q3MI99 Gm45828-201ENSMUST00000206938 1836 ntBASIC11.52□□□□□ -0.57
Ccbe1Q3MI99 Gm28308-201ENSMUST00000128102 752 ntAPPRIS P1 TSL 3 BASIC11.52□□□□□ -0.57
Ccbe1Q3MI99 Gm13066-201ENSMUST00000145263 884 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Ccbe1Q3MI99 Cby3-202ENSMUST00000164067 731 ntAPPRIS P1 TSL 5 BASIC11.52□□□□□ -0.57
Ccbe1Q3MI99 Zfp511-201ENSMUST00000168194 1076 ntAPPRIS P1 TSL 2 BASIC11.52□□□□□ -0.57
Ccbe1Q3MI99 Arpp19-210ENSMUST00000170308 429 ntAPPRIS P1 TSL 2 BASIC11.52□□□□□ -0.57
Ccbe1Q3MI99 Gm27494-201ENSMUST00000184735 189 ntBASIC11.52□□□□□ -0.57
Ccbe1Q3MI99 Mir7036b-201ENSMUST00000184791 63 ntBASIC11.52□□□□□ -0.57
Ccbe1Q3MI99 Gm19184-201ENSMUST00000196798 928 ntBASIC11.52□□□□□ -0.57
Ccbe1Q3MI99 Gm32351-201ENSMUST00000220503 438 ntTSL 5 BASIC11.52□□□□□ -0.57
Ccbe1Q3MI99 AC169036.1-201ENSMUST00000227994 296 ntBASIC11.52□□□□□ -0.57
Ccbe1Q3MI99 Cnpy2-201ENSMUST00000026446 763 ntAPPRIS P1 TSL 5 BASIC11.52□□□□□ -0.57
Ccbe1Q3MI99 Rnaseh2a-201ENSMUST00000065049 1006 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Ccbe1Q3MI99 Gm9898-201ENSMUST00000065469 1161 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Ccbe1Q3MI99 Tsga10-202ENSMUST00000088072 3837 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.57
Ccbe1Q3MI99 Kcnab2-203ENSMUST00000159186 1552 ntTSL 5 BASIC11.52□□□□□ -0.57
Ccbe1Q3MI99 Ptx4-201ENSMUST00000054930 1582 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Ccbe1Q3MI99 Chpf2-201ENSMUST00000088295 5371 ntAPPRIS P1 TSL 2 BASIC11.52□□□□□ -0.57
Ccbe1Q3MI99 Slc35g3-201ENSMUST00000102586 1618 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Ccbe1Q3MI99 Pex19-201ENSMUST00000075895 1917 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Ccbe1Q3MI99 Vasn-201ENSMUST00000038770 2829 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Ccbe1Q3MI99 Nrd1-201ENSMUST00000065977 4311 ntAPPRIS P3 TSL 1 (best) BASIC11.52□□□□□ -0.57
Ccbe1Q3MI99 Kcnq3-201ENSMUST00000070256 11824 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Ccbe1Q3MI99 Abcc6-201ENSMUST00000002850 4974 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Ccbe1Q3MI99 Chd1-201ENSMUST00000024620 3196 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Ccbe1Q3MI99 Pcnt-202ENSMUST00000217838 9341 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.57
Ccbe1Q3MI99 Kalrn-203ENSMUST00000114947 2922 ntTSL 5 BASIC11.52□□□□□ -0.57
Ccbe1Q3MI99 Usp2-201ENSMUST00000034508 3867 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Ccbe1Q3MI99 1700019D03Rik-202ENSMUST00000114492 3565 ntAPPRIS P1 TSL 3 BASIC11.52□□□□□ -0.57
Ccbe1Q3MI99 Arhgap39-201ENSMUST00000036176 4500 ntAPPRIS ALT2 TSL 5 BASIC11.52□□□□□ -0.57
Ccbe1Q3MI99 Ints6l-207ENSMUST00000186445 3608 ntAPPRIS P1 TSL 2 BASIC11.52□□□□□ -0.57
Ccbe1Q3MI99 Hsd17b7-202ENSMUST00000111353 1446 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Ccbe1Q3MI99 Fam189b-201ENSMUST00000041913 3083 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Ccbe1Q3MI99 Eif3j1-201ENSMUST00000028668 5413 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Ccbe1Q3MI99 Reln-207ENSMUST00000161356 11699 ntAPPRIS P3 TSL 5 BASIC11.51□□□□□ -0.57
Ccbe1Q3MI99 Prune1-201ENSMUST00000015855 3140 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Ccbe1Q3MI99 Bhlha15-201ENSMUST00000060747 3494 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Ccbe1Q3MI99 Sez6l2-201ENSMUST00000106332 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Ccbe1Q3MI99 Chmp5-201ENSMUST00000030128 1519 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Ccbe1Q3MI99 F7-201ENSMUST00000033820 1859 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Ccbe1Q3MI99 Gm45496-201ENSMUST00000209918 2917 ntBASIC11.51□□□□□ -0.57
Ccbe1Q3MI99 Pcdh15-238ENSMUST00000193739 5034 ntAPPRIS ALT2 TSL 5 BASIC11.51□□□□□ -0.57
Ccbe1Q3MI99 Pltp-203ENSMUST00000109317 1575 ntTSL 5 BASIC11.51□□□□□ -0.57
Ccbe1Q3MI99 Bcar3-201ENSMUST00000029766 3311 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Ccbe1Q3MI99 Grip2-201ENSMUST00000159684 3006 ntAPPRIS ALT2 TSL 5 BASIC11.51□□□□□ -0.57
Ccbe1Q3MI99 Sh3kbp1-206ENSMUST00000112456 7317 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Ccbe1Q3MI99 Vmac-202ENSMUST00000164907 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Ccbe1Q3MI99 Dyx1c1-202ENSMUST00000098567 1612 ntAPPRIS ALT2 TSL 5 BASIC11.51□□□□□ -0.57
Ccbe1Q3MI99 Tnnc2-201ENSMUST00000103095 700 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Ccbe1Q3MI99 Mettl23-201ENSMUST00000106370 1276 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Ccbe1Q3MI99 Slc39a1-ps-201ENSMUST00000120862 969 ntBASIC11.51□□□□□ -0.57
Ccbe1Q3MI99 Haghl-206ENSMUST00000138759 1074 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Ccbe1Q3MI99 Ntpcr-205ENSMUST00000143504 520 ntTSL 5 BASIC11.51□□□□□ -0.57
Ccbe1Q3MI99 Iqcf1-202ENSMUST00000164965 523 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Ccbe1Q3MI99 Rab40c-203ENSMUST00000164982 789 ntTSL 5 BASIC11.51□□□□□ -0.57
Ccbe1Q3MI99 Hoxb8-203ENSMUST00000168043 1141 ntAPPRIS P1 TSL 5 BASIC11.51□□□□□ -0.57
Ccbe1Q3MI99 Mcee-203ENSMUST00000206194 532 ntTSL 2 BASIC11.51□□□□□ -0.57
Ccbe1Q3MI99 Tspan32-211ENSMUST00000207211 1220 ntTSL 5 BASIC11.51□□□□□ -0.57
Ccbe1Q3MI99 Gm5186-201ENSMUST00000218781 920 ntBASIC11.51□□□□□ -0.57
Ccbe1Q3MI99 Krtap19-4-201ENSMUST00000051103 304 ntAPPRIS P1 BASIC11.51□□□□□ -0.57
Ccbe1Q3MI99 Tmem86b-201ENSMUST00000055085 1222 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Ccbe1Q3MI99 Gm9789-201ENSMUST00000062524 397 ntAPPRIS P1 BASIC11.51□□□□□ -0.57
Ccbe1Q3MI99 Slc6a9-202ENSMUST00000063857 3146 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Ccbe1Q3MI99 Trmt1-204ENSMUST00000109768 2044 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Ccbe1Q3MI99 Slc39a6-201ENSMUST00000070726 3882 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Ccbe1Q3MI99 Ccnb1-201ENSMUST00000072119 2489 ntAPPRIS P2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Ccbe1Q3MI99 Pogk-202ENSMUST00000128861 4848 ntAPPRIS P3 TSL 1 (best) BASIC11.51□□□□□ -0.57
Ccbe1Q3MI99 Med12l-203ENSMUST00000040846 3747 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Ccbe1Q3MI99 Pitpnm3-201ENSMUST00000075258 6555 ntAPPRIS P3 TSL 1 (best) BASIC11.51□□□□□ -0.57
Ccbe1Q3MI99 Rab3a-204ENSMUST00000110093 1442 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Ccbe1Q3MI99 Slc37a2-201ENSMUST00000115068 5943 ntAPPRIS P3 TSL 1 (best) BASIC11.51□□□□□ -0.57
Ccbe1Q3MI99 Kifap3-201ENSMUST00000027877 3946 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Ccbe1Q3MI99 Gabrr1-201ENSMUST00000029947 2286 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Ccbe1Q3MI99 Kif13b-201ENSMUST00000100473 5603 ntAPPRIS P2 TSL 5 BASIC11.51□□□□□ -0.57
Ccbe1Q3MI99 Fbxo18-201ENSMUST00000071564 3567 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Ccbe1Q3MI99 Rasa3-201ENSMUST00000117551 4404 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Retrieved 100 of 76,532 protein–RNA pairs in 92.4 ms