Protein–RNA interactions for Protein: Q2QI47

Ush2A, Usherin, mousemouse

Predictions only

Length 5,193 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ush2AQ2QI47 Efna1-203ENSMUST00000118860 1403 ntTSL 5 BASIC6.52□□□□□ -1.37
Ush2AQ2QI47 Phf8-204ENSMUST00000112666 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC6.52□□□□□ -1.37
Ush2AQ2QI47 Sypl-201ENSMUST00000020885 2019 ntAPPRIS ALT2 TSL 1 (best) BASIC6.52□□□□□ -1.37
Ush2AQ2QI47 Adck1-202ENSMUST00000166940 2199 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
Ush2AQ2QI47 Xkr5-202ENSMUST00000095438 2838 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
Ush2AQ2QI47 Lnx1-206ENSMUST00000121690 2302 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
Ush2AQ2QI47 Gm4262-201ENSMUST00000180624 1986 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
Ush2AQ2QI47 Npc2-201ENSMUST00000021668 3299 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
Ush2AQ2QI47 Rad9b-201ENSMUST00000049009 1631 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
Ush2AQ2QI47 Ifitm1-202ENSMUST00000106040 560 ntAPPRIS P1 TSL 3 BASIC6.51□□□□□ -1.37
Ush2AQ2QI47 Ifitm1-203ENSMUST00000106042 882 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
Ush2AQ2QI47 Gm14227-201ENSMUST00000119431 629 ntBASIC6.51□□□□□ -1.37
Ush2AQ2QI47 Gm5863-201ENSMUST00000121760 1008 ntBASIC6.51□□□□□ -1.37
Ush2AQ2QI47 Gm7150-201ENSMUST00000122032 981 ntBASIC6.51□□□□□ -1.37
Ush2AQ2QI47 Gm16228-201ENSMUST00000162286 809 ntBASIC6.51□□□□□ -1.37
Ush2AQ2QI47 Retn-202ENSMUST00000169234 1139 ntAPPRIS P1 TSL 2 BASIC6.51□□□□□ -1.37
Ush2AQ2QI47 Gm9162-201ENSMUST00000182081 991 ntBASIC6.51□□□□□ -1.37
Ush2AQ2QI47 Rassf6-205ENSMUST00000202704 1178 ntAPPRIS P3 TSL 5 BASIC6.51□□□□□ -1.37
Ush2AQ2QI47 Olfr1248-201ENSMUST00000216129 1078 ntAPPRIS P1 BASIC6.51□□□□□ -1.37
Ush2AQ2QI47 AL844586.1-201ENSMUST00000224297 1042 ntBASIC6.51□□□□□ -1.37
Ush2AQ2QI47 AC138604.1-201ENSMUST00000226969 739 ntBASIC6.51□□□□□ -1.37
Ush2AQ2QI47 Ifitm1-201ENSMUST00000026564 736 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
Ush2AQ2QI47 Btbd1-201ENSMUST00000026093 3001 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
Ush2AQ2QI47 Rtn3-203ENSMUST00000088169 1709 ntTSL 5 BASIC6.51□□□□□ -1.37
Ush2AQ2QI47 Nit1-203ENSMUST00000111296 1394 ntTSL 5 BASIC6.51□□□□□ -1.37
Ush2AQ2QI47 Pdzk1-201ENSMUST00000058865 2406 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
Ush2AQ2QI47 Rpe-202ENSMUST00000113995 2713 ntTSL 3 BASIC6.51□□□□□ -1.37
Ush2AQ2QI47 1700066M21Rik-201ENSMUST00000042734 3008 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
Ush2AQ2QI47 Morf4l2-202ENSMUST00000080411 1859 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
Ush2AQ2QI47 Msantd3-201ENSMUST00000061135 1589 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
Ush2AQ2QI47 Casp8-201ENSMUST00000027189 2585 ntAPPRIS P3 TSL 1 (best) BASIC6.51□□□□□ -1.37
Ush2AQ2QI47 Gosr2-202ENSMUST00000107013 1044 ntTSL 2 BASIC6.51□□□□□ -1.37
Ush2AQ2QI47 Gm11511-201ENSMUST00000118146 540 ntBASIC6.51□□□□□ -1.37
Ush2AQ2QI47 Gm23432-201ENSMUST00000157181 131 ntBASIC6.51□□□□□ -1.37
Ush2AQ2QI47 Gm25591-201ENSMUST00000177317 94 ntBASIC6.51□□□□□ -1.37
Ush2AQ2QI47 Mir6387-201ENSMUST00000184042 108 ntBASIC6.51□□□□□ -1.37
Ush2AQ2QI47 Mrpl20-206ENSMUST00000185148 494 ntTSL 3 BASIC6.51□□□□□ -1.37
Ush2AQ2QI47 Gm5291-201ENSMUST00000201965 899 ntBASIC6.51□□□□□ -1.37
Ush2AQ2QI47 Gm18504-201ENSMUST00000220917 929 ntBASIC6.51□□□□□ -1.37
Ush2AQ2QI47 Tapt1-201ENSMUST00000055128 3513 ntAPPRIS P1 TSL 5 BASIC6.51□□□□□ -1.37
Ush2AQ2QI47 Zbtb20-202ENSMUST00000114690 2759 ntAPPRIS ALT1 TSL 1 (best) BASIC6.51□□□□□ -1.37
Ush2AQ2QI47 Sema6b-201ENSMUST00000001256 3736 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
Ush2AQ2QI47 Cdc25c-201ENSMUST00000060710 1941 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
Ush2AQ2QI47 Coch-201ENSMUST00000085412 2456 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
Ush2AQ2QI47 Ptpn2-202ENSMUST00000120934 1497 ntAPPRIS ALT2 TSL 5 BASIC6.51□□□□□ -1.37
Ush2AQ2QI47 Gm36970-201ENSMUST00000193688 1859 ntBASIC6.51□□□□□ -1.37
Ush2AQ2QI47 Tfe3-205ENSMUST00000115678 2658 ntTSL 5 BASIC6.51□□□□□ -1.37
Ush2AQ2QI47 Klhdc3-201ENSMUST00000071841 2123 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
Ush2AQ2QI47 Cln3-201ENSMUST00000032962 2386 ntAPPRIS P2 TSL 1 (best) BASIC6.51□□□□□ -1.37
Ush2AQ2QI47 Hars-201ENSMUST00000001416 1987 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
Ush2AQ2QI47 Mphosph10-201ENSMUST00000032735 2248 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
Ush2AQ2QI47 Gm28386-201ENSMUST00000189147 1849 ntBASIC6.51□□□□□ -1.37
Ush2AQ2QI47 Ttc3-202ENSMUST00000119131 3212 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
Ush2AQ2QI47 Mrps17-207ENSMUST00000121813 868 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
Ush2AQ2QI47 Gm17597-201ENSMUST00000181220 1115 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
Ush2AQ2QI47 Gm37218-201ENSMUST00000192917 390 ntTSL 2 BASIC6.51□□□□□ -1.37
Ush2AQ2QI47 Gm35657-201ENSMUST00000215869 989 ntTSL 5 BASIC6.51□□□□□ -1.37
Ush2AQ2QI47 Gm5040-201ENSMUST00000218609 800 ntBASIC6.51□□□□□ -1.37
Ush2AQ2QI47 Gm20052-201ENSMUST00000200831 1525 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
Ush2AQ2QI47 Mff-209ENSMUST00000160972 1358 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
Ush2AQ2QI47 4933405D12Rik-201ENSMUST00000180557 1383 ntTSL 2 BASIC6.51□□□□□ -1.37
Ush2AQ2QI47 Tspan32-202ENSMUST00000075172 1876 ntAPPRIS P3 TSL 1 (best) BASIC6.51□□□□□ -1.37
Ush2AQ2QI47 Map4k5-203ENSMUST00000110570 4498 ntAPPRIS P5 TSL 5 BASIC6.51□□□□□ -1.37
Ush2AQ2QI47 Irf9-205ENSMUST00000138037 2343 ntAPPRIS ALT2 TSL 1 (best) BASIC6.51□□□□□ -1.37
Ush2AQ2QI47 Fbxl12-202ENSMUST00000086459 2086 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
Ush2AQ2QI47 Ccne2-201ENSMUST00000029866 3006 ntAPPRIS ALT1 TSL 1 (best) BASIC6.51□□□□□ -1.37
Ush2AQ2QI47 Stk33-204ENSMUST00000121748 2295 ntAPPRIS P1 TSL 5 BASIC6.51□□□□□ -1.37
Ush2AQ2QI47 Brinp1-201ENSMUST00000030036 3212 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
Ush2AQ2QI47 Scarf1-202ENSMUST00000118243 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC6.51□□□□□ -1.37
Ush2AQ2QI47 Atat1-212ENSMUST00000141662 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC6.51□□□□□ -1.37
Ush2AQ2QI47 Dmgdh-201ENSMUST00000048001 2992 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
Ush2AQ2QI47 Dlgap1-206ENSMUST00000133717 2355 ntAPPRIS ALT2 TSL 5 BASIC6.51□□□□□ -1.37
Ush2AQ2QI47 Eef1akmt3-201ENSMUST00000116231 2719 ntAPPRIS P1 TSL 5 BASIC6.51□□□□□ -1.37
Ush2AQ2QI47 Dnm1l-201ENSMUST00000023477 4017 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
Ush2AQ2QI47 Zc3hc1-203ENSMUST00000115184 1504 ntTSL 5 BASIC6.51□□□□□ -1.37
Ush2AQ2QI47 Gm38246-201ENSMUST00000194318 1511 ntBASIC6.51□□□□□ -1.37
Ush2AQ2QI47 Pemt-202ENSMUST00000102692 1003 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
Ush2AQ2QI47 Gm15221-201ENSMUST00000144439 414 ntTSL 3 BASIC6.51□□□□□ -1.37
Ush2AQ2QI47 AU015836-205ENSMUST00000163458 911 ntAPPRIS P1 TSL 5 BASIC6.51□□□□□ -1.37
Ush2AQ2QI47 Gm10320-201ENSMUST00000170205 527 ntAPPRIS P1 TSL 5 BASIC6.51□□□□□ -1.37
Ush2AQ2QI47 Gm31497-201ENSMUST00000216981 638 ntTSL 5 BASIC6.51□□□□□ -1.37
Ush2AQ2QI47 Gm5537-201ENSMUST00000091117 1252 ntBASIC6.51□□□□□ -1.37
Ush2AQ2QI47 Hnrnpr-204ENSMUST00000131671 2543 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
Ush2AQ2QI47 AC117194.1-201ENSMUST00000224847 3002 ntBASIC6.51□□□□□ -1.37
Ush2AQ2QI47 Rxra-201ENSMUST00000077257 4905 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
Ush2AQ2QI47 Slc39a8-201ENSMUST00000029810 3203 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
Ush2AQ2QI47 Mme-206ENSMUST00000194150 3345 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
Ush2AQ2QI47 Htr7-202ENSMUST00000164639 3057 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
Ush2AQ2QI47 Spef1-202ENSMUST00000110218 2600 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
Ush2AQ2QI47 Stpg2-202ENSMUST00000106239 2055 ntAPPRIS P1 TSL 5 BASIC6.51□□□□□ -1.37
Ush2AQ2QI47 Ttyh2-201ENSMUST00000045779 3486 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
Ush2AQ2QI47 Hnrnpf-203ENSMUST00000167182 2271 ntAPPRIS P1 TSL 3 BASIC6.5□□□□□ -1.37
Ush2AQ2QI47 Hnf1b-202ENSMUST00000108113 2376 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
Ush2AQ2QI47 Kdm8-201ENSMUST00000033010 2389 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
Ush2AQ2QI47 Med8-204ENSMUST00000106384 1743 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
Ush2AQ2QI47 Gm11379-201ENSMUST00000154678 381 ntTSL 3 BASIC6.5□□□□□ -1.37
Ush2AQ2QI47 Mir6930-201ENSMUST00000183859 68 ntBASIC6.5□□□□□ -1.37
Ush2AQ2QI47 Zcwpw2-203ENSMUST00000187803 372 ntBASIC6.5□□□□□ -1.37
Ush2AQ2QI47 AY761184-201ENSMUST00000071886 503 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
Ush2AQ2QI47 Lgals1-201ENSMUST00000089377 800 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
Retrieved 100 of 76,532 protein–RNA pairs in 27.8 ms