Protein–RNA interactions for Protein: Q07563

Col17a1, Collagen alpha-1(XVII) chain, mousemouse

Predictions only

Length 1,470 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col17a1Q07563 Map3k14-201ENSMUST00000021324 4246 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Col17a1Q07563 Lmntd2-202ENSMUST00000170841 2077 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
Col17a1Q07563 Phf20l1-201ENSMUST00000048188 6670 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
Col17a1Q07563 Nudt1-205ENSMUST00000110827 744 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
Col17a1Q07563 Gm12274-201ENSMUST00000120062 385 ntBASIC19.1■□□□□ 0.65
Col17a1Q07563 Gm15196-201ENSMUST00000121406 482 ntBASIC19.1■□□□□ 0.65
Col17a1Q07563 Gm12946-201ENSMUST00000122969 519 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Col17a1Q07563 Gm16048-201ENSMUST00000134250 663 ntTSL 3 BASIC19.1■□□□□ 0.65
Col17a1Q07563 Gm14320-201ENSMUST00000137275 1023 ntTSL 3 BASIC19.1■□□□□ 0.65
Col17a1Q07563 Gm14798-201ENSMUST00000139695 1189 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Col17a1Q07563 Polr3c-205ENSMUST00000141377 808 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Col17a1Q07563 9130204K15Rik-202ENSMUST00000150312 696 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Col17a1Q07563 Osgep-207ENSMUST00000162177 1219 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Col17a1Q07563 Tnnt1-206ENSMUST00000163710 885 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
Col17a1Q07563 Scgb2b7-201ENSMUST00000178258 520 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Col17a1Q07563 Sqle-201ENSMUST00000022977 2758 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Col17a1Q07563 Taar7f-201ENSMUST00000071691 1077 ntAPPRIS P1 BASIC19.1■□□□□ 0.65
Col17a1Q07563 Gm5537-201ENSMUST00000091117 1252 ntBASIC19.1■□□□□ 0.65
Col17a1Q07563 Taar7d-201ENSMUST00000092657 1077 ntAPPRIS P1 BASIC19.1■□□□□ 0.65
Col17a1Q07563 Wnt11-201ENSMUST00000067495 3451 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
Col17a1Q07563 Pbx3-201ENSMUST00000040638 2587 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
Col17a1Q07563 Arhgap20os-204ENSMUST00000152203 2113 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Col17a1Q07563 Grk6-203ENSMUST00000224118 1997 ntAPPRIS ALT2 BASIC19.1■□□□□ 0.65
Col17a1Q07563 Fnbp1-203ENSMUST00000100207 1680 ntTSL 5 BASIC19.1■□□□□ 0.65
Col17a1Q07563 Inpp4a-201ENSMUST00000027287 5691 ntAPPRIS P2 TSL 5 BASIC19.1■□□□□ 0.65
Col17a1Q07563 Cdkl3-201ENSMUST00000063303 2765 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
Col17a1Q07563 9130017K11Rik-202ENSMUST00000135670 3338 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Col17a1Q07563 Usp48-201ENSMUST00000055131 5722 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Col17a1Q07563 Capn12-201ENSMUST00000066880 3040 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
Col17a1Q07563 Taf10-203ENSMUST00000141116 4281 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Col17a1Q07563 Fbxl19-201ENSMUST00000033081 3410 ntAPPRIS P2 TSL 1 (best) BASIC19.1■□□□□ 0.65
Col17a1Q07563 Gm39822-201ENSMUST00000212253 2284 ntTSL 5 BASIC19.1■□□□□ 0.65
Col17a1Q07563 Alas1-207ENSMUST00000141118 3399 ntAPPRIS P2 TSL 5 BASIC19.1■□□□□ 0.65
Col17a1Q07563 Nsun7-203ENSMUST00000201100 2775 ntAPPRIS P3 TSL 5 BASIC19.1■□□□□ 0.65
Col17a1Q07563 Psmc3-201ENSMUST00000002171 1819 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Col17a1Q07563 Itpa-ps1-201ENSMUST00000117207 597 ntBASIC19.09■□□□□ 0.65
Col17a1Q07563 Saxo2-202ENSMUST00000126478 430 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
Col17a1Q07563 Gm11981-201ENSMUST00000139769 664 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Col17a1Q07563 Gm25394-201ENSMUST00000157338 133 ntBASIC19.09■□□□□ 0.65
Col17a1Q07563 Gm7271-202ENSMUST00000191515 836 ntAPPRIS P1 TSL 5 BASIC19.09■□□□□ 0.65
Col17a1Q07563 Gm8956-201ENSMUST00000203939 825 ntBASIC19.09■□□□□ 0.65
Col17a1Q07563 Olfr368-202ENSMUST00000217299 1200 ntAPPRIS P1 TSL 5 BASIC19.09■□□□□ 0.65
Col17a1Q07563 Mrpl33-201ENSMUST00000031024 478 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Col17a1Q07563 Gm8181-201ENSMUST00000062242 669 ntBASIC19.09■□□□□ 0.65
Col17a1Q07563 B230206H07Rik-202ENSMUST00000134845 3269 ntTSL 5 BASIC19.09■□□□□ 0.65
Col17a1Q07563 Wfdc8-201ENSMUST00000094351 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
Col17a1Q07563 Gm21451-201ENSMUST00000111062 2775 ntBASIC19.09■□□□□ 0.65
Col17a1Q07563 Ppp2r5c-205ENSMUST00000221715 2367 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Col17a1Q07563 4930588G17Rik-201ENSMUST00000208075 1474 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Col17a1Q07563 Ptpdc1-201ENSMUST00000035824 4402 ntAPPRIS P2 TSL 1 (best) BASIC19.09■□□□□ 0.65
Col17a1Q07563 Aoc2-202ENSMUST00000107264 2230 ntTSL 5 BASIC19.09■□□□□ 0.65
Col17a1Q07563 Gm20488-201ENSMUST00000201641 2996 ntTSL 2 BASIC19.09■□□□□ 0.65
Col17a1Q07563 Repin1-204ENSMUST00000135151 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
Col17a1Q07563 Edn3-201ENSMUST00000029030 3117 ntAPPRIS P2 TSL 1 (best) BASIC19.09■□□□□ 0.65
Col17a1Q07563 Cd33-202ENSMUST00000039861 1791 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
Col17a1Q07563 Cd72-201ENSMUST00000030179 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
Col17a1Q07563 Ppt1-201ENSMUST00000030412 2381 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Col17a1Q07563 Slc7a7-209ENSMUST00000226753 2126 ntAPPRIS P1 BASIC19.09■□□□□ 0.65
Col17a1Q07563 Slc7a7-201ENSMUST00000000984 2132 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Col17a1Q07563 Hist1h4i-201ENSMUST00000102977 727 ntAPPRIS P1 BASIC19.09■□□□□ 0.65
Col17a1Q07563 Ighv2-6-8-201ENSMUST00000103455 342 ntAPPRIS ALT2 BASIC19.09■□□□□ 0.65
Col17a1Q07563 Gm11952-201ENSMUST00000121172 821 ntBASIC19.09■□□□□ 0.65
Col17a1Q07563 Gm12972-201ENSMUST00000152986 1006 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Col17a1Q07563 Ly6i-202ENSMUST00000166694 620 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Col17a1Q07563 Ppy-202ENSMUST00000170554 487 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Col17a1Q07563 Gm43671-201ENSMUST00000200422 433 ntBASIC19.09■□□□□ 0.65
Col17a1Q07563 Gm43866-201ENSMUST00000203894 839 ntBASIC19.09■□□□□ 0.65
Col17a1Q07563 CT025603.1-201ENSMUST00000224040 448 ntBASIC19.09■□□□□ 0.65
Col17a1Q07563 Atrnl1-201ENSMUST00000077282 6581 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Col17a1Q07563 Ccnf-201ENSMUST00000115390 3099 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Col17a1Q07563 Traf2-201ENSMUST00000028311 3044 ntAPPRIS P3 TSL 1 (best) BASIC19.08■□□□□ 0.65
Col17a1Q07563 Gm12522-201ENSMUST00000142833 2439 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
Col17a1Q07563 Tjp1-202ENSMUST00000102592 7049 ntAPPRIS P3 TSL 1 (best) BASIC19.08■□□□□ 0.65
Col17a1Q07563 Nrxn1-204ENSMUST00000159778 3414 ntTSL 5 BASIC19.08■□□□□ 0.65
Col17a1Q07563 Pgm2-201ENSMUST00000058351 2371 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Col17a1Q07563 Tmpo-202ENSMUST00000072239 3533 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
Col17a1Q07563 Me2-201ENSMUST00000025439 2455 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Col17a1Q07563 Fam214a-202ENSMUST00000170846 4355 ntAPPRIS ALT2 TSL 5 BASIC19.08■□□□□ 0.64
Col17a1Q07563 Ttc13-210ENSMUST00000214828 3301 ntAPPRIS P1 TSL 5 BASIC19.08■□□□□ 0.64
Col17a1Q07563 H3f3b-202ENSMUST00000106454 2514 ntAPPRIS P1 TSL 5 BASIC19.08■□□□□ 0.64
Col17a1Q07563 Unc5a-201ENSMUST00000026994 3995 ntAPPRIS P3 TSL 1 (best) BASIC19.08■□□□□ 0.64
Col17a1Q07563 Lins1-202ENSMUST00000077967 2647 ntAPPRIS ALT2 TSL 2 BASIC19.08■□□□□ 0.64
Col17a1Q07563 Srpk1-202ENSMUST00000114767 445 ntTSL 3 BASIC19.08■□□□□ 0.64
Col17a1Q07563 Gm13039-201ENSMUST00000118638 794 ntBASIC19.08■□□□□ 0.64
Col17a1Q07563 H2afb3-201ENSMUST00000122050 348 ntAPPRIS P1 BASIC19.08■□□□□ 0.64
Col17a1Q07563 Gm11789-203ENSMUST00000140645 737 ntTSL 2 BASIC19.08■□□□□ 0.64
Col17a1Q07563 Gm24294-201ENSMUST00000158295 277 ntBASIC19.08■□□□□ 0.64
Col17a1Q07563 4930524O07Rik-202ENSMUST00000162334 293 ntTSL 2 BASIC19.08■□□□□ 0.64
Col17a1Q07563 Cdhr4-208ENSMUST00000176373 492 ntTSL 5 BASIC19.08■□□□□ 0.64
Col17a1Q07563 Senp1-204ENSMUST00000180657 3806 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.64
Col17a1Q07563 Gm37981-201ENSMUST00000194280 535 ntBASIC19.08■□□□□ 0.64
Col17a1Q07563 Gm43380-201ENSMUST00000200421 220 ntBASIC19.08■□□□□ 0.64
Col17a1Q07563 AC162938.2-202ENSMUST00000215497 722 ntTSL 5 BASIC19.08■□□□□ 0.64
Col17a1Q07563 Gm4065-202ENSMUST00000218911 986 ntTSL 3 BASIC19.08■□□□□ 0.64
Col17a1Q07563 Dnajc27-202ENSMUST00000049584 2934 ntAPPRIS P1 TSL 2 BASIC19.08■□□□□ 0.64
Col17a1Q07563 Slc22a15-207ENSMUST00000190824 3010 ntTSL 5 BASIC19.08■□□□□ 0.64
Col17a1Q07563 Nxpe5-202ENSMUST00000159798 2568 ntAPPRIS P2 TSL 1 (best) BASIC19.08■□□□□ 0.64
Col17a1Q07563 Adnp-202ENSMUST00000088001 4932 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Col17a1Q07563 Jun-201ENSMUST00000107094 3189 ntAPPRIS P1 BASIC19.07■□□□□ 0.64
Col17a1Q07563 Ccpg1-206ENSMUST00000140675 2839 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
Retrieved 100 of 76,532 protein–RNA pairs in 44.4 ms