Protein–RNA interactions for Protein: Q03958

Pfdn6, Prefoldin subunit 6, mousemouse

Predictions only

Length 127 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pfdn6Q03958 Bbs4-201ENSMUST00000026265 2518 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Pfdn6Q03958 Nlrp6-204ENSMUST00000184560 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Pfdn6Q03958 Dnmt1-203ENSMUST00000178110 5870 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Pfdn6Q03958 6330537M06Rik-201ENSMUST00000212384 1642 ntBASIC12.81□□□□□ -0.36
Pfdn6Q03958 Gm10371-201ENSMUST00000127429 1411 ntTSL 2 BASIC12.81□□□□□ -0.36
Pfdn6Q03958 Tmc6-201ENSMUST00000026659 2865 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Pfdn6Q03958 Actn1-201ENSMUST00000021554 3734 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Pfdn6Q03958 2410002F23Rik-206ENSMUST00000107950 3336 ntAPPRIS P2 TSL 2 BASIC12.81□□□□□ -0.36
Pfdn6Q03958 Setd1a-201ENSMUST00000047075 6487 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
Pfdn6Q03958 D830030K20Rik-201ENSMUST00000112797 1695 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Pfdn6Q03958 Serpinb12-201ENSMUST00000081277 1689 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Pfdn6Q03958 Vps36-201ENSMUST00000033866 3574 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Pfdn6Q03958 Ighv2-9-201ENSMUST00000103451 362 ntAPPRIS P1 BASIC12.81□□□□□ -0.36
Pfdn6Q03958 Psme2b-201ENSMUST00000104958 837 ntAPPRIS P1 BASIC12.81□□□□□ -0.36
Pfdn6Q03958 Qdpr-202ENSMUST00000117425 1231 ntTSL 3 BASIC12.81□□□□□ -0.36
Pfdn6Q03958 Gm20521-201ENSMUST00000134077 1245 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
Pfdn6Q03958 Nat8f4-202ENSMUST00000159755 1129 ntTSL 2 BASIC12.81□□□□□ -0.36
Pfdn6Q03958 Crb3-204ENSMUST00000163763 868 ntAPPRIS P3 TSL 2 BASIC12.81□□□□□ -0.36
Pfdn6Q03958 Borcs5-202ENSMUST00000166591 792 ntTSL 2 BASIC12.81□□□□□ -0.36
Pfdn6Q03958 Pde4b-210ENSMUST00000172616 823 ntTSL 5 BASIC12.81□□□□□ -0.36
Pfdn6Q03958 H2-Pa-201ENSMUST00000182803 626 ntBASIC12.81□□□□□ -0.36
Pfdn6Q03958 Gm8598-201ENSMUST00000221184 836 ntBASIC12.81□□□□□ -0.36
Pfdn6Q03958 Lrrc74b-201ENSMUST00000023442 2135 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Pfdn6Q03958 Hdhd3-201ENSMUST00000037820 1205 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Pfdn6Q03958 Pin1rt1-201ENSMUST00000099659 1172 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Pfdn6Q03958 Mest-211ENSMUST00000163949 2561 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
Pfdn6Q03958 Neu4-201ENSMUST00000050890 4511 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
Pfdn6Q03958 Gadl1-203ENSMUST00000121770 1763 ntAPPRIS P2 TSL 5 BASIC12.81□□□□□ -0.36
Pfdn6Q03958 Slc7a6-201ENSMUST00000034378 3750 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Pfdn6Q03958 Ubxn10-203ENSMUST00000105811 2926 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Pfdn6Q03958 Crhr2-208ENSMUST00000212633 2041 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Pfdn6Q03958 Egfl6-201ENSMUST00000000412 2704 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Pfdn6Q03958 Klhdc7b-201ENSMUST00000166926 1818 ntAPPRIS P2 BASIC12.81□□□□□ -0.36
Pfdn6Q03958 Anapc11-201ENSMUST00000026128 3229 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Pfdn6Q03958 Gm43045-201ENSMUST00000198725 2095 ntBASIC12.81□□□□□ -0.36
Pfdn6Q03958 Hpcal4-202ENSMUST00000106246 1627 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
Pfdn6Q03958 AF529169-201ENSMUST00000044491 7202 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Pfdn6Q03958 Zfp64-203ENSMUST00000109162 2848 ntAPPRIS P1 TSL 2 BASIC12.8□□□□□ -0.36
Pfdn6Q03958 Gm42957-201ENSMUST00000137564 3624 ntAPPRIS P1 TSL 2 BASIC12.8□□□□□ -0.36
Pfdn6Q03958 1700128E19Rik-201ENSMUST00000134409 2439 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Pfdn6Q03958 Vmn1r65-201ENSMUST00000086338 2682 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Pfdn6Q03958 Dnmt1-201ENSMUST00000004202 5367 ntAPPRIS P4 TSL 1 (best) BASIC12.8□□□□□ -0.36
Pfdn6Q03958 Klhl38-201ENSMUST00000022985 2212 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Pfdn6Q03958 Tufm-202ENSMUST00000106392 1754 ntTSL 2 BASIC12.8□□□□□ -0.36
Pfdn6Q03958 4931406C07Rik-208ENSMUST00000216955 1750 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Pfdn6Q03958 Gm11555-202ENSMUST00000104929 638 ntAPPRIS P1 BASIC12.8□□□□□ -0.36
Pfdn6Q03958 Gm13813-201ENSMUST00000120998 787 ntBASIC12.8□□□□□ -0.36
Pfdn6Q03958 Gm16175-201ENSMUST00000128181 248 ntTSL 3 BASIC12.8□□□□□ -0.36
Pfdn6Q03958 Rwdd3-209ENSMUST00000170781 1111 ntTSL 5 BASIC12.8□□□□□ -0.36
Pfdn6Q03958 Gm8099-201ENSMUST00000200510 742 ntBASIC12.8□□□□□ -0.36
Pfdn6Q03958 4933405L10Rik-202ENSMUST00000211852 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Pfdn6Q03958 Ddx19b-202ENSMUST00000065784 3104 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Pfdn6Q03958 Thpo-201ENSMUST00000076422 1587 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Pfdn6Q03958 4933415J04Rik-201ENSMUST00000195895 1301 ntBASIC12.8□□□□□ -0.36
Pfdn6Q03958 Slc39a8-201ENSMUST00000029810 3203 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Pfdn6Q03958 4933431E20Rik-209ENSMUST00000146337 1636 ntTSL 5 BASIC12.8□□□□□ -0.36
Pfdn6Q03958 Polr3e-202ENSMUST00000106483 3001 ntAPPRIS P3 TSL 5 BASIC12.8□□□□□ -0.36
Pfdn6Q03958 Ormdl1-201ENSMUST00000027266 1910 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Pfdn6Q03958 Tbc1d14-205ENSMUST00000136189 4436 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Pfdn6Q03958 Adrb3-201ENSMUST00000081438 2795 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Pfdn6Q03958 Cdk11b-201ENSMUST00000067081 2595 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
Pfdn6Q03958 Ube2a-201ENSMUST00000016452 1732 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
Pfdn6Q03958 Nkd2-201ENSMUST00000022051 4016 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
Pfdn6Q03958 Dctn2-201ENSMUST00000026479 1784 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Pfdn6Q03958 Pglyrp2-202ENSMUST00000170392 2068 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Pfdn6Q03958 Pxn-202ENSMUST00000086523 2667 ntAPPRIS ALT2 TSL 2 BASIC12.79□□□□□ -0.36
Pfdn6Q03958 Tom1l2-202ENSMUST00000093046 4849 ntTSL 5 BASIC12.79□□□□□ -0.36
Pfdn6Q03958 Secisbp2-201ENSMUST00000040117 3328 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Pfdn6Q03958 Gm36864-203ENSMUST00000223070 1513 ntAPPRIS P5 TSL 5 BASIC12.79□□□□□ -0.36
Pfdn6Q03958 Lztr1-201ENSMUST00000023444 3112 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Pfdn6Q03958 Zfp783-204ENSMUST00000130490 4419 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Pfdn6Q03958 Zbtb32-201ENSMUST00000108150 854 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Pfdn6Q03958 Gm8805-201ENSMUST00000117848 313 ntBASIC12.79□□□□□ -0.36
Pfdn6Q03958 Gm11803-201ENSMUST00000119966 444 ntBASIC12.79□□□□□ -0.36
Pfdn6Q03958 Gm13123-201ENSMUST00000122173 492 ntBASIC12.79□□□□□ -0.36
Pfdn6Q03958 Gm13112-201ENSMUST00000138795 1258 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Pfdn6Q03958 Ssr4-208ENSMUST00000166518 800 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Pfdn6Q03958 Gm8810-201ENSMUST00000172895 754 ntBASIC12.79□□□□□ -0.36
Pfdn6Q03958 Gm24196-201ENSMUST00000179161 110 ntBASIC12.79□□□□□ -0.36
Pfdn6Q03958 Gm37497-201ENSMUST00000195830 798 ntBASIC12.79□□□□□ -0.36
Pfdn6Q03958 Gm44799-201ENSMUST00000207639 1202 ntBASIC12.79□□□□□ -0.36
Pfdn6Q03958 Ccnt1-208ENSMUST00000169707 7397 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Pfdn6Q03958 Gm18263-201ENSMUST00000220846 1928 ntBASIC12.79□□□□□ -0.36
Pfdn6Q03958 Adtrp-202ENSMUST00000121404 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Pfdn6Q03958 Wdr59-201ENSMUST00000034437 4896 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Pfdn6Q03958 Scube1-203ENSMUST00000076060 3913 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Pfdn6Q03958 Dstyk-201ENSMUST00000045110 6282 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Pfdn6Q03958 Gm13050-201ENSMUST00000122149 1345 ntBASIC12.79□□□□□ -0.36
Pfdn6Q03958 Uchl1os-201ENSMUST00000152002 1685 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Pfdn6Q03958 Lgr5-201ENSMUST00000020350 4714 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Pfdn6Q03958 Alkbh3-202ENSMUST00000111240 1395 ntTSL 5 BASIC12.79□□□□□ -0.36
Pfdn6Q03958 Nat3-201ENSMUST00000070514 1395 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Pfdn6Q03958 Acer1-201ENSMUST00000056113 2429 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Pfdn6Q03958 Kcnk2-202ENSMUST00000110920 3572 ntAPPRIS ALT1 TSL 5 BASIC12.79□□□□□ -0.36
Pfdn6Q03958 Dennd4c-202ENSMUST00000082026 7940 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
Pfdn6Q03958 Calcr-204ENSMUST00000170266 2175 ntAPPRIS P4 TSL 1 (best) BASIC12.79□□□□□ -0.36
Pfdn6Q03958 Gprc5c-208ENSMUST00000177952 1809 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
Pfdn6Q03958 Aqp8-201ENSMUST00000033023 1487 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Pfdn6Q03958 2810403A07Rik-201ENSMUST00000029696 2981 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Pfdn6Q03958 Stat5b-202ENSMUST00000107358 5213 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 76.4 ms