Protein–RNA interactions for Protein: Q01853

Vcp, Transitional endoplasmic reticulum ATPase, mousemouse

Known RBP Predictions only

Length 806 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VcpQ01853 Fen1-201ENSMUST00000025651 2341 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
VcpQ01853 Igf1-204ENSMUST00000121161 1344 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
VcpQ01853 Mecr-201ENSMUST00000030742 1337 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
VcpQ01853 Prr15l-201ENSMUST00000054311 1342 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
VcpQ01853 Senp5-201ENSMUST00000023457 3498 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
VcpQ01853 Zbtb2-202ENSMUST00000100078 3226 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
VcpQ01853 Ebna1bp2-201ENSMUST00000030501 2960 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
VcpQ01853 Cdc14a-202ENSMUST00000106491 4292 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
VcpQ01853 Tekt2-201ENSMUST00000030658 1492 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
VcpQ01853 Chst3-201ENSMUST00000068690 5985 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
VcpQ01853 Plxnb2-202ENSMUST00000109331 6377 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
VcpQ01853 Acbd5-208ENSMUST00000226571 3802 ntAPPRIS ALT2 BASIC13.61□□□□□ -0.23
VcpQ01853 Rnps1-202ENSMUST00000115371 1617 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
VcpQ01853 Slc6a8-201ENSMUST00000033752 3964 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
VcpQ01853 Ltbp2-203ENSMUST00000163189 6470 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
VcpQ01853 Myo10-202ENSMUST00000110457 8125 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
VcpQ01853 Suclg1-201ENSMUST00000064740 1519 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
VcpQ01853 Cfap69-201ENSMUST00000054865 4956 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
VcpQ01853 Ngly1-207ENSMUST00000224656 2329 ntAPPRIS ALT2 BASIC13.61□□□□□ -0.23
VcpQ01853 Dnajb4-204ENSMUST00000144950 2459 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
VcpQ01853 1500011K16Rik-201ENSMUST00000135091 800 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
VcpQ01853 Gm16379-201ENSMUST00000161469 348 ntBASIC13.61□□□□□ -0.23
VcpQ01853 Tmem40-205ENSMUST00000166254 811 ntAPPRIS P3 TSL 5 BASIC13.61□□□□□ -0.23
VcpQ01853 Gm8762-201ENSMUST00000193486 339 ntBASIC13.61□□□□□ -0.23
VcpQ01853 Gm43597-201ENSMUST00000201650 1057 ntTSL 3 BASIC13.61□□□□□ -0.23
VcpQ01853 Gm7046-201ENSMUST00000221351 977 ntBASIC13.61□□□□□ -0.23
VcpQ01853 Lrpprc-201ENSMUST00000112308 4393 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
VcpQ01853 Trim27-205ENSMUST00000221464 1400 ntTSL 5 BASIC13.61□□□□□ -0.23
VcpQ01853 AC096628.2-201ENSMUST00000225443 1413 ntBASIC13.61□□□□□ -0.23
VcpQ01853 Ptpn7-203ENSMUST00000187985 1990 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
VcpQ01853 Cdc45-201ENSMUST00000000028 2143 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
VcpQ01853 Rbm11-203ENSMUST00000114253 2699 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
VcpQ01853 Fam49b-201ENSMUST00000063838 3797 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
VcpQ01853 Pja1-201ENSMUST00000036354 2563 ntAPPRIS P4 TSL 1 (best) BASIC13.61□□□□□ -0.23
VcpQ01853 Myh10-204ENSMUST00000108673 1315 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
VcpQ01853 Krt40-201ENSMUST00000074253 1320 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
VcpQ01853 Wnt7a-201ENSMUST00000032180 3172 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
VcpQ01853 Evi5l-202ENSMUST00000176072 3932 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
VcpQ01853 Klhl38-201ENSMUST00000022985 2212 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
VcpQ01853 Sesn3-204ENSMUST00000208222 9125 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
VcpQ01853 Wfdc1-201ENSMUST00000024107 1371 ntAPPRIS P2 TSL 1 (best) BASIC13.6□□□□□ -0.23
VcpQ01853 Dgcr14-201ENSMUST00000003621 2819 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
VcpQ01853 Il7-205ENSMUST00000194279 4858 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
VcpQ01853 Afap1l1-201ENSMUST00000120472 3444 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
VcpQ01853 Foxred2-202ENSMUST00000117725 4347 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
VcpQ01853 Ccdc162-203ENSMUST00000099932 2742 ntTSL 5 BASIC13.6□□□□□ -0.23
VcpQ01853 Gzf1-201ENSMUST00000028928 4232 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
VcpQ01853 Zbtb7b-203ENSMUST00000107433 3650 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
VcpQ01853 Psmc3-203ENSMUST00000111441 1419 ntTSL 5 BASIC13.6□□□□□ -0.23
VcpQ01853 Fsd1-201ENSMUST00000011733 1748 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
VcpQ01853 Dctn6-203ENSMUST00000118811 934 ntTSL 3 BASIC13.6□□□□□ -0.23
VcpQ01853 Tnfrsf18-203ENSMUST00000122001 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
VcpQ01853 Tor1aip2-207ENSMUST00000128941 2925 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
VcpQ01853 Cd34-201ENSMUST00000016638 2454 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
VcpQ01853 Gm27194-201ENSMUST00000175753 2936 ntBASIC13.6□□□□□ -0.23
VcpQ01853 Gm28287-201ENSMUST00000186612 546 ntTSL 5 BASIC13.6□□□□□ -0.23
VcpQ01853 Zfp709-202ENSMUST00000188374 717 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
VcpQ01853 Gm38804-201ENSMUST00000203998 767 ntTSL 3 BASIC13.6□□□□□ -0.23
VcpQ01853 Gm21769-201ENSMUST00000211922 111 ntBASIC13.6□□□□□ -0.23
VcpQ01853 AC124171.1-201ENSMUST00000221151 567 ntTSL 5 BASIC13.6□□□□□ -0.23
VcpQ01853 Gm36264-202ENSMUST00000221989 1142 ntTSL 5 BASIC13.6□□□□□ -0.23
VcpQ01853 AC122371.3-201ENSMUST00000223402 1061 ntBASIC13.6□□□□□ -0.23
VcpQ01853 Epha8-201ENSMUST00000030420 4713 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
VcpQ01853 Cpa1-201ENSMUST00000031806 1583 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
VcpQ01853 Parp2-201ENSMUST00000036126 1894 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
VcpQ01853 Ctrc-201ENSMUST00000037059 951 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
VcpQ01853 Capg-201ENSMUST00000071044 1247 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
VcpQ01853 Pin1rt1-201ENSMUST00000099659 1172 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
VcpQ01853 Hoxb13-201ENSMUST00000062709 2206 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
VcpQ01853 Gal3st4-203ENSMUST00000161647 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
VcpQ01853 Ncan-201ENSMUST00000002412 7195 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
VcpQ01853 Sirt4-201ENSMUST00000112066 1794 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
VcpQ01853 Prkca-201ENSMUST00000059595 8409 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
VcpQ01853 Smpd2-201ENSMUST00000019965 1602 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
VcpQ01853 Ntrk2-204ENSMUST00000224259 3049 ntBASIC13.6□□□□□ -0.23
VcpQ01853 Akt1-205ENSMUST00000128300 1342 ntTSL 5 BASIC13.6□□□□□ -0.23
VcpQ01853 Ccdc85a-204ENSMUST00000109502 5220 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
VcpQ01853 Rubie-203ENSMUST00000227803 2430 ntBASIC13.6□□□□□ -0.23
VcpQ01853 Cux2-202ENSMUST00000111752 8784 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
VcpQ01853 Otub2-201ENSMUST00000021620 2791 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
VcpQ01853 Gm8798-201ENSMUST00000211877 1661 ntBASIC13.59□□□□□ -0.23
VcpQ01853 Vmn1r198-202ENSMUST00000226786 6195 ntAPPRIS P2 BASIC13.59□□□□□ -0.23
VcpQ01853 Kifc5c-ps-201ENSMUST00000179040 1530 ntBASIC13.59□□□□□ -0.23
VcpQ01853 Esyt3-201ENSMUST00000042158 4483 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
VcpQ01853 Hectd2-208ENSMUST00000169036 3842 ntAPPRIS ALT1 TSL 1 (best) BASIC13.59□□□□□ -0.23
VcpQ01853 M6pr-202ENSMUST00000112610 2539 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
VcpQ01853 M6pr-201ENSMUST00000007602 2515 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
VcpQ01853 AC117194.1-201ENSMUST00000224847 3002 ntBASIC13.59□□□□□ -0.23
VcpQ01853 Bak1-202ENSMUST00000078691 2387 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
VcpQ01853 Vps29-208ENSMUST00000155671 2716 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
VcpQ01853 Lmf2-201ENSMUST00000023283 2906 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
VcpQ01853 Rp2-202ENSMUST00000115387 4498 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
VcpQ01853 Bnip3l-ps-201ENSMUST00000101577 657 ntBASIC13.59□□□□□ -0.23
VcpQ01853 Rpl38-204ENSMUST00000106602 371 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
VcpQ01853 Gm11618-201ENSMUST00000117946 267 ntBASIC13.59□□□□□ -0.23
VcpQ01853 Gm14017-201ENSMUST00000121934 386 ntBASIC13.59□□□□□ -0.23
VcpQ01853 Gm11751-201ENSMUST00000126187 460 ntTSL 3 BASIC13.59□□□□□ -0.23
VcpQ01853 1700125G22Rik-201ENSMUST00000181124 861 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
VcpQ01853 Pced1c-ps-201ENSMUST00000187740 751 ntBASIC13.59□□□□□ -0.23
VcpQ01853 Gm37497-201ENSMUST00000195830 798 ntBASIC13.59□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 34.9 ms