Protein–RNA interactions for Protein: P97386

Lig3, DNA ligase 3, mousemouse

Predictions only

Length 1,015 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lig3P97386 Atp6ap1-202ENSMUST00000114171 2157 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Lig3P97386 AC116503.1-201ENSMUST00000215445 2192 ntBASIC13.93□□□□□ -0.18
Lig3P97386 Pnpla6-211ENSMUST00000207941 4263 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Lig3P97386 Gm9333-201ENSMUST00000205452 1323 ntBASIC13.93□□□□□ -0.18
Lig3P97386 Slc7a11-205ENSMUST00000194462 2419 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Lig3P97386 Ero1lb-201ENSMUST00000071973 4239 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Lig3P97386 Zc3h4-201ENSMUST00000098789 6039 ntAPPRIS P2 TSL 5 BASIC13.93□□□□□ -0.18
Lig3P97386 G2e3-201ENSMUST00000054308 6803 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
Lig3P97386 Myh3-203ENSMUST00000165221 5994 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
Lig3P97386 Scamp5-201ENSMUST00000046587 3225 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Lig3P97386 Gcdh-202ENSMUST00000109745 2114 ntAPPRIS ALT2 TSL 5 BASIC13.93□□□□□ -0.18
Lig3P97386 Ankrd34b-201ENSMUST00000061594 4013 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Lig3P97386 AC154725.1-201ENSMUST00000224826 1961 ntBASIC13.93□□□□□ -0.18
Lig3P97386 Gfra1-203ENSMUST00000129100 4415 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Lig3P97386 Tjap1-203ENSMUST00000180283 2368 ntAPPRIS P2 TSL 5 BASIC13.93□□□□□ -0.18
Lig3P97386 Mei4-202ENSMUST00000189391 1817 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Lig3P97386 Kcnc1-203ENSMUST00000160433 3156 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Lig3P97386 Gm6023-201ENSMUST00000118217 606 ntBASIC13.93□□□□□ -0.18
Lig3P97386 Gm14662-201ENSMUST00000145552 734 ntTSL 3 BASIC13.93□□□□□ -0.18
Lig3P97386 Ftl1-ps2-201ENSMUST00000169477 549 ntBASIC13.93□□□□□ -0.18
Lig3P97386 Gm7008-202ENSMUST00000170019 402 ntTSL 2 BASIC13.93□□□□□ -0.18
Lig3P97386 Gm5565-201ENSMUST00000199463 1162 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
Lig3P97386 Nme2-201ENSMUST00000021217 1012 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Lig3P97386 AC073947.2-201ENSMUST00000215888 1130 ntBASIC13.93□□□□□ -0.18
Lig3P97386 Ggact-201ENSMUST00000038075 1076 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Lig3P97386 Fgf2-201ENSMUST00000038885 462 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Lig3P97386 Olfr283-201ENSMUST00000057386 1102 ntAPPRIS P1 BASIC13.93□□□□□ -0.18
Lig3P97386 Capg-201ENSMUST00000071044 1247 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Lig3P97386 C2cd4c-201ENSMUST00000059699 6729 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Lig3P97386 Bpi-203ENSMUST00000109500 1911 ntAPPRIS ALT2 TSL 5 BASIC13.93□□□□□ -0.18
Lig3P97386 Prkca-201ENSMUST00000059595 8409 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Lig3P97386 Vwa3b-202ENSMUST00000067178 1769 ntAPPRIS P5 TSL 2 BASIC13.93□□□□□ -0.18
Lig3P97386 Snx12-202ENSMUST00000120389 2415 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Lig3P97386 Acp5-203ENSMUST00000165735 1376 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Lig3P97386 Sipa1l2-204ENSMUST00000212987 6690 ntAPPRIS P2 TSL 5 BASIC13.93□□□□□ -0.18
Lig3P97386 Evc2-201ENSMUST00000056365 4091 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Lig3P97386 Shisa9-201ENSMUST00000023138 4326 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Lig3P97386 Rlbp1-201ENSMUST00000053718 2134 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Lig3P97386 Sh3bp2-202ENSMUST00000101316 3031 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Lig3P97386 Cnn1-201ENSMUST00000001384 2381 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Lig3P97386 Rcsd1-201ENSMUST00000040357 2622 ntAPPRIS P4 TSL 1 (best) BASIC13.93□□□□□ -0.18
Lig3P97386 Canx-201ENSMUST00000020637 3779 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Lig3P97386 Nop58-201ENSMUST00000027174 1713 ntAPPRIS ALT2 TSL 5 BASIC13.93□□□□□ -0.18
Lig3P97386 Rps6ka4-202ENSMUST00000170516 3105 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Lig3P97386 Rps6ka4-201ENSMUST00000025903 3105 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Lig3P97386 Nr2c2-201ENSMUST00000113460 7647 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
Lig3P97386 Calcr-203ENSMUST00000168592 2064 ntAPPRIS ALT2 TSL 5 BASIC13.92□□□□□ -0.18
Lig3P97386 AC122228.1-201ENSMUST00000223113 2057 ntTSL 5 BASIC13.92□□□□□ -0.18
Lig3P97386 Snx14-207ENSMUST00000174806 3082 ntAPPRIS ALT2 TSL 5 BASIC13.92□□□□□ -0.18
Lig3P97386 Ampd2-202ENSMUST00000102637 3586 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
Lig3P97386 Clpb-211ENSMUST00000209579 4159 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Lig3P97386 Pgm3-201ENSMUST00000070064 2666 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Lig3P97386 Pitpnm2-204ENSMUST00000159677 1690 ntTSL 5 BASIC13.92□□□□□ -0.18
Lig3P97386 Zfp354c-201ENSMUST00000000632 1683 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Lig3P97386 Hsd3b3-203ENSMUST00000107018 1443 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Lig3P97386 Cd63-202ENSMUST00000105229 1043 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Lig3P97386 Mad2l2-203ENSMUST00000105707 949 ntTSL 3 BASIC13.92□□□□□ -0.18
Lig3P97386 Tnnt3-217ENSMUST00000105957 1028 ntAPPRIS ALT2 TSL 5 BASIC13.92□□□□□ -0.18
Lig3P97386 Gm38158-201ENSMUST00000194617 339 ntBASIC13.92□□□□□ -0.18
Lig3P97386 Gm43597-201ENSMUST00000201650 1057 ntTSL 3 BASIC13.92□□□□□ -0.18
Lig3P97386 Gm21769-201ENSMUST00000211922 111 ntBASIC13.92□□□□□ -0.18
Lig3P97386 Cd63-204ENSMUST00000219317 1109 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
Lig3P97386 Gm7046-201ENSMUST00000221351 977 ntBASIC13.92□□□□□ -0.18
Lig3P97386 Lsm7-201ENSMUST00000035775 468 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Lig3P97386 Olfr222-201ENSMUST00000071943 1115 ntAPPRIS P1 BASIC13.92□□□□□ -0.18
Lig3P97386 Foxl2os-201ENSMUST00000181706 3095 ntTSL 2 BASIC13.92□□□□□ -0.18
Lig3P97386 Dct-201ENSMUST00000022725 2202 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Lig3P97386 Pcnx2-204ENSMUST00000131127 3782 ntTSL 5 BASIC13.92□□□□□ -0.18
Lig3P97386 Galnt6-202ENSMUST00000159715 3796 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Lig3P97386 Slc12a8-202ENSMUST00000117134 2081 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Lig3P97386 Nbeal2-210ENSMUST00000167320 8803 ntAPPRIS P2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Lig3P97386 Stx3-203ENSMUST00000075304 2430 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Lig3P97386 Spef1-202ENSMUST00000110218 2600 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Lig3P97386 Gtf2ird1-224ENSMUST00000202280 3052 ntAPPRIS ALT2 TSL 5 BASIC13.92□□□□□ -0.18
Lig3P97386 Dcaf4-208ENSMUST00000223291 2005 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Lig3P97386 Nup88-203ENSMUST00000108531 2453 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Lig3P97386 Gm14342-201ENSMUST00000137629 2119 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Lig3P97386 Txn2-203ENSMUST00000109747 1778 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Lig3P97386 Pcgf2-201ENSMUST00000018681 1755 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Lig3P97386 Skp1a-201ENSMUST00000037324 1440 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Lig3P97386 9130011E15Rik-201ENSMUST00000045396 2896 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
Lig3P97386 Trappc9-204ENSMUST00000170633 4688 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Lig3P97386 Flrt1-201ENSMUST00000113383 5859 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Lig3P97386 Upk3b-201ENSMUST00000062606 3530 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Lig3P97386 Fgd2-201ENSMUST00000024810 2612 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Lig3P97386 Stxbp1-202ENSMUST00000077458 3616 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Lig3P97386 Pou2f2-203ENSMUST00000108415 7095 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
Lig3P97386 Cpt1c-206ENSMUST00000212836 2716 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Lig3P97386 Tfcp2-201ENSMUST00000009877 3250 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Lig3P97386 Nelfcd-202ENSMUST00000109075 2279 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Lig3P97386 Rps10-203ENSMUST00000114882 614 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Lig3P97386 Rhox2c-201ENSMUST00000115190 762 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
Lig3P97386 Gm4986-201ENSMUST00000119731 549 ntBASIC13.91□□□□□ -0.18
Lig3P97386 Psme1-202ENSMUST00000172738 681 ntTSL 5 BASIC13.91□□□□□ -0.18
Lig3P97386 Tmem210-201ENSMUST00000028340 516 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Lig3P97386 Gm3402-201ENSMUST00000036715 981 ntAPPRIS ALT2 TSL 5 BASIC13.91□□□□□ -0.18
Lig3P97386 Gm10146-201ENSMUST00000072739 309 ntBASIC13.91□□□□□ -0.18
Lig3P97386 Usmg5-201ENSMUST00000096014 341 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Lig3P97386 Nrf1-211ENSMUST00000115212 3584 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Lig3P97386 2610507I01Rik-201ENSMUST00000154354 1360 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Retrieved 100 of 76,532 protein–RNA pairs in 68.3 ms