Protein–RNA interactions for Protein: P97334

Nkx2-3, Homeobox protein Nkx-2.3, mousemouse

Predictions only

Length 362 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-3P97334 Gm18556-201ENSMUST00000219748 1031 ntBASIC15.9■□□□□ 0.14
Nkx2-3P97334 Fam92b-201ENSMUST00000048786 1187 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
Nkx2-3P97334 Snrk-201ENSMUST00000118886 4811 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Nkx2-3P97334 Rbpsuh-rs3-201ENSMUST00000182751 1441 ntBASIC15.9■□□□□ 0.14
Nkx2-3P97334 Shisa9-202ENSMUST00000170672 3421 ntAPPRIS P4 TSL 1 (best) BASIC15.9■□□□□ 0.14
Nkx2-3P97334 Fam110a-203ENSMUST00000109864 1591 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Nkx2-3P97334 Hoxd3os1-202ENSMUST00000139005 1701 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Nkx2-3P97334 F7-201ENSMUST00000033820 1859 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Nkx2-3P97334 Tmem201-201ENSMUST00000054459 4631 ntAPPRIS ALT2 TSL 2 BASIC15.9■□□□□ 0.14
Nkx2-3P97334 Sfswap-201ENSMUST00000053737 3313 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
Nkx2-3P97334 Slc6a18-208ENSMUST00000222029 2005 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
Nkx2-3P97334 Kcnt1-211ENSMUST00000171268 3771 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
Nkx2-3P97334 Iqsec1-202ENSMUST00000101153 8036 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
Nkx2-3P97334 Sgce-209ENSMUST00000133306 1619 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Nkx2-3P97334 Gm16070-203ENSMUST00000155588 1902 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Nkx2-3P97334 Gm6210-201ENSMUST00000204734 1942 ntBASIC15.9■□□□□ 0.14
Nkx2-3P97334 Med14-202ENSMUST00000096495 6963 ntAPPRIS P2 TSL 5 BASIC15.9■□□□□ 0.14
Nkx2-3P97334 Gorab-201ENSMUST00000045138 2538 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Nkx2-3P97334 Wapl-205ENSMUST00000169910 4066 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.14
Nkx2-3P97334 Gm26599-201ENSMUST00000180590 3189 ntTSL 5 BASIC15.89■□□□□ 0.13
Nkx2-3P97334 Kifc3-202ENSMUST00000169353 2898 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
Nkx2-3P97334 Rab10os-202ENSMUST00000177896 2872 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Nkx2-3P97334 Gm34376-201ENSMUST00000218529 2107 ntTSL 5 BASIC15.89■□□□□ 0.13
Nkx2-3P97334 Caln1-201ENSMUST00000086029 1801 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Nkx2-3P97334 5033406O09Rik-201ENSMUST00000221314 1662 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Nkx2-3P97334 Rgl1-203ENSMUST00000111859 5092 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
Nkx2-3P97334 Hs3st3b1-201ENSMUST00000094103 4911 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Nkx2-3P97334 Rbm4-206ENSMUST00000180248 2610 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Nkx2-3P97334 Ptgdr2-201ENSMUST00000037261 2644 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Nkx2-3P97334 Naaladl1-201ENSMUST00000044451 2491 ntAPPRIS P1 TSL 2 BASIC15.89■□□□□ 0.13
Nkx2-3P97334 Afmid-201ENSMUST00000073388 2327 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Nkx2-3P97334 Kif11-201ENSMUST00000012587 4819 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Nkx2-3P97334 Trav13-1-201ENSMUST00000103651 331 ntAPPRIS P1 BASIC15.89■□□□□ 0.13
Nkx2-3P97334 Pla2g1b-202ENSMUST00000112071 361 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Nkx2-3P97334 Gm13611-201ENSMUST00000118269 318 ntBASIC15.89■□□□□ 0.13
Nkx2-3P97334 Smpd4-223ENSMUST00000172182 516 ntTSL 3 BASIC15.89■□□□□ 0.13
Nkx2-3P97334 Gm28375-201ENSMUST00000185304 430 ntTSL 3 BASIC15.89■□□□□ 0.13
Nkx2-3P97334 Ino80dos-202ENSMUST00000186436 652 ntTSL 5 BASIC15.89■□□□□ 0.13
Nkx2-3P97334 2810405F17Rik-201ENSMUST00000189334 1117 ntBASIC15.89■□□□□ 0.13
Nkx2-3P97334 Gm31048-201ENSMUST00000196103 1061 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Nkx2-3P97334 Dhrs4-202ENSMUST00000226168 828 ntBASIC15.89■□□□□ 0.13
Nkx2-3P97334 Spcs1-203ENSMUST00000226374 592 ntBASIC15.89■□□□□ 0.13
Nkx2-3P97334 Cga-201ENSMUST00000029975 687 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Nkx2-3P97334 Ppp1r2-ps3-201ENSMUST00000078012 627 ntBASIC15.89■□□□□ 0.13
Nkx2-3P97334 Olfr605-201ENSMUST00000080660 1011 ntAPPRIS P1 BASIC15.89■□□□□ 0.13
Nkx2-3P97334 Ifi27-205ENSMUST00000085065 977 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
Nkx2-3P97334 Rab22a-201ENSMUST00000029024 7155 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Nkx2-3P97334 Gm10767-202ENSMUST00000168767 2067 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Nkx2-3P97334 Rhox9-202ENSMUST00000170643 2422 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Nkx2-3P97334 Lingo1-202ENSMUST00000114247 2287 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Nkx2-3P97334 Myo19-202ENSMUST00000093969 4091 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
Nkx2-3P97334 Mapk8ip3-207ENSMUST00000121723 5410 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
Nkx2-3P97334 Stau2-214ENSMUST00000162007 2964 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Nkx2-3P97334 Arap1-204ENSMUST00000107010 5147 ntAPPRIS P2 TSL 1 (best) BASIC15.89■□□□□ 0.13
Nkx2-3P97334 Camkk2-201ENSMUST00000111668 4861 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
Nkx2-3P97334 Ube2o-201ENSMUST00000082152 5205 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Nkx2-3P97334 Six4-201ENSMUST00000043208 6402 ntAPPRIS P2 TSL 1 (best) BASIC15.89■□□□□ 0.13
Nkx2-3P97334 Kdr-201ENSMUST00000113516 5924 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Nkx2-3P97334 Mfsd13b-201ENSMUST00000033166 1883 ntAPPRIS P2 TSL 1 (best) BASIC15.88■□□□□ 0.13
Nkx2-3P97334 Adam11-201ENSMUST00000068150 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
Nkx2-3P97334 Sstr5-202ENSMUST00000165183 2581 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Nkx2-3P97334 Nub1-201ENSMUST00000068825 3269 ntAPPRIS P3 TSL 1 (best) BASIC15.88■□□□□ 0.13
Nkx2-3P97334 Lsp1-205ENSMUST00000105968 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
Nkx2-3P97334 Oxct1-205ENSMUST00000138927 1743 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Nkx2-3P97334 Lrriq4-201ENSMUST00000108265 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
Nkx2-3P97334 Trappc9-203ENSMUST00000168191 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
Nkx2-3P97334 Angel2-203ENSMUST00000110899 3673 ntTSL 5 BASIC15.88■□□□□ 0.13
Nkx2-3P97334 Snrpn-201ENSMUST00000059305 1932 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Nkx2-3P97334 Ubtf-203ENSMUST00000107115 3199 ntAPPRIS ALT2 TSL 5 BASIC15.88■□□□□ 0.13
Nkx2-3P97334 6030466F02Rik-201ENSMUST00000212339 1434 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Nkx2-3P97334 Tmem87b-201ENSMUST00000110325 4807 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Nkx2-3P97334 Igf2-204ENSMUST00000105936 3970 ntAPPRIS P1 TSL 2 BASIC15.88■□□□□ 0.13
Nkx2-3P97334 Mfsd4a-205ENSMUST00000144548 3288 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Nkx2-3P97334 Mageb17-ps-201ENSMUST00000117902 919 ntBASIC15.88■□□□□ 0.13
Nkx2-3P97334 Gm15891-201ENSMUST00000127307 611 ntTSL 5 BASIC15.88■□□□□ 0.13
Nkx2-3P97334 Tmem74bos-201ENSMUST00000137422 390 ntTSL 3 BASIC15.88■□□□□ 0.13
Nkx2-3P97334 Gm14662-201ENSMUST00000145552 734 ntTSL 3 BASIC15.88■□□□□ 0.13
Nkx2-3P97334 AC154252.2-201ENSMUST00000223593 767 ntBASIC15.88■□□□□ 0.13
Nkx2-3P97334 Ankrd2-201ENSMUST00000026172 1100 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Nkx2-3P97334 Sftpd-201ENSMUST00000077136 1275 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Nkx2-3P97334 Frmd4b-203ENSMUST00000113355 4913 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Nkx2-3P97334 Mmgt2-203ENSMUST00000129162 1828 ntAPPRIS P1 TSL 5 BASIC15.88■□□□□ 0.13
Nkx2-3P97334 Atg16l1-203ENSMUST00000113190 3102 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Nkx2-3P97334 Erg-206ENSMUST00000122199 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Nkx2-3P97334 Elp5-201ENSMUST00000108594 1454 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Nkx2-3P97334 Tmem159-201ENSMUST00000033210 1484 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Nkx2-3P97334 Prrt3-201ENSMUST00000101059 3304 ntAPPRIS P3 TSL 1 (best) BASIC15.88■□□□□ 0.13
Nkx2-3P97334 Ppm1e-201ENSMUST00000055438 6344 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Nkx2-3P97334 Luc7l2-207ENSMUST00000161227 2405 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Nkx2-3P97334 Dhx58-201ENSMUST00000017974 2412 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Nkx2-3P97334 Slc45a1-201ENSMUST00000037827 3387 ntAPPRIS P2 TSL 1 (best) BASIC15.88■□□□□ 0.13
Nkx2-3P97334 Tor1aip2-205ENSMUST00000111757 6118 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Nkx2-3P97334 Epb41l1-204ENSMUST00000103137 6490 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Nkx2-3P97334 Mthfsd-210ENSMUST00000139782 1366 ntTSL 5 BASIC15.87■□□□□ 0.13
Nkx2-3P97334 Cacng3-201ENSMUST00000084615 2777 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Nkx2-3P97334 Fem1b-201ENSMUST00000034775 6785 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Nkx2-3P97334 Aacs-201ENSMUST00000031445 3239 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Nkx2-3P97334 Gm45278-201ENSMUST00000209650 2414 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Nkx2-3P97334 Shc4-203ENSMUST00000110480 3671 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Nkx2-3P97334 Pax6-202ENSMUST00000090397 3069 ntAPPRIS ALT1 TSL 5 BASIC15.87■□□□□ 0.13
Retrieved 100 of 76,532 protein–RNA pairs in 33.5 ms