Protein–RNA interactions for Protein: P86448

Trim43b, Tripartite motif-containing protein 43B, mousemouse

Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim43bP86448 Calhm3-201ENSMUST00000178630 1044 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
Trim43bP86448 Gm43240-201ENSMUST00000198543 630 ntTSL 3 BASIC13.12□□□□□ -0.31
Trim43bP86448 9230020A06Rik-204ENSMUST00000215201 1116 ntTSL 5 BASIC13.12□□□□□ -0.31
Trim43bP86448 1700127F24Rik-201ENSMUST00000221685 604 ntBASIC13.12□□□□□ -0.31
Trim43bP86448 Gp9-201ENSMUST00000032133 881 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trim43bP86448 Mrps17-201ENSMUST00000042191 832 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trim43bP86448 Fam173b-201ENSMUST00000042702 1164 ntAPPRIS P2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trim43bP86448 Slc6a4-201ENSMUST00000021195 2725 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trim43bP86448 Ylpm1-202ENSMUST00000101202 4605 ntAPPRIS ALT2 TSL 5 BASIC13.12□□□□□ -0.31
Trim43bP86448 Ccdc88c-201ENSMUST00000068411 7542 ntAPPRIS P2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trim43bP86448 Oxr1-203ENSMUST00000090096 4515 ntTSL 5 BASIC13.12□□□□□ -0.31
Trim43bP86448 Abcc6-201ENSMUST00000002850 4974 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trim43bP86448 Nfe2l1-210ENSMUST00000167110 3547 ntAPPRIS ALT2 TSL 2 BASIC13.12□□□□□ -0.31
Trim43bP86448 Git1-201ENSMUST00000037285 3512 ntAPPRIS P2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trim43bP86448 Slc35g3-201ENSMUST00000102586 1618 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trim43bP86448 Mmp28-202ENSMUST00000103209 3438 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trim43bP86448 Tbc1d2-201ENSMUST00000084621 4315 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trim43bP86448 Lhx6-201ENSMUST00000112960 3345 ntAPPRIS P1 TSL 2 BASIC13.12□□□□□ -0.31
Trim43bP86448 Cyth2-208ENSMUST00000211783 1983 ntTSL 5 BASIC13.12□□□□□ -0.31
Trim43bP86448 Zp1-201ENSMUST00000025641 1963 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trim43bP86448 Ptp4a1-201ENSMUST00000027232 4145 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trim43bP86448 Gm5912-201ENSMUST00000122282 1438 ntBASIC13.12□□□□□ -0.31
Trim43bP86448 Nwd2-201ENSMUST00000159584 8534 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trim43bP86448 Vwa8-201ENSMUST00000040990 7054 ntAPPRIS P2 TSL 5 BASIC13.12□□□□□ -0.31
Trim43bP86448 Cend1-203ENSMUST00000137488 1697 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trim43bP86448 Pcdh19-202ENSMUST00000149154 10289 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trim43bP86448 AC166574.4-201ENSMUST00000227165 1937 ntBASIC13.11□□□□□ -0.31
Trim43bP86448 Gnb2-202ENSMUST00000111020 1470 ntTSL 5 BASIC13.11□□□□□ -0.31
Trim43bP86448 AC122371.1-201ENSMUST00000220876 1477 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Trim43bP86448 Pdlim5-201ENSMUST00000029941 5016 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trim43bP86448 Gm44942-201ENSMUST00000096093 2072 ntBASIC13.11□□□□□ -0.31
Trim43bP86448 Adcyap1r1-203ENSMUST00000165786 1745 ntAPPRIS ALT2 TSL 5 BASIC13.11□□□□□ -0.31
Trim43bP86448 Rhbdd2-201ENSMUST00000043707 4207 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trim43bP86448 Apol6-206ENSMUST00000149569 2315 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trim43bP86448 Gm16907-201ENSMUST00000180734 2317 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Trim43bP86448 Zfp354c-202ENSMUST00000109135 5325 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trim43bP86448 Shisa9-202ENSMUST00000170672 3421 ntAPPRIS P4 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trim43bP86448 Mettl27-201ENSMUST00000047196 2808 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trim43bP86448 Mpv17l-201ENSMUST00000023360 3087 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trim43bP86448 Chpf2-201ENSMUST00000088295 5371 ntAPPRIS P1 TSL 2 BASIC13.11□□□□□ -0.31
Trim43bP86448 Gm36970-201ENSMUST00000193688 1859 ntBASIC13.11□□□□□ -0.31
Trim43bP86448 Pank4-202ENSMUST00000070953 2706 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Trim43bP86448 Tssc4-202ENSMUST00000105920 895 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Trim43bP86448 Unc50-202ENSMUST00000114925 1094 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trim43bP86448 Gm13612-201ENSMUST00000119276 390 ntBASIC13.11□□□□□ -0.31
Trim43bP86448 Prss41-202ENSMUST00000122936 1088 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trim43bP86448 Gm11752-201ENSMUST00000143291 510 ntTSL 2 BASIC13.11□□□□□ -0.31
Trim43bP86448 Gm5276-201ENSMUST00000196683 1047 ntBASIC13.11□□□□□ -0.31
Trim43bP86448 Ube2a-205ENSMUST00000201068 1298 ntTSL 5 BASIC13.11□□□□□ -0.31
Trim43bP86448 Gm45505-201ENSMUST00000210252 948 ntTSL 5 BASIC13.11□□□□□ -0.31
Trim43bP86448 Gm36756-203ENSMUST00000223029 1166 ntTSL 5 BASIC13.11□□□□□ -0.31
Trim43bP86448 Atpif1-201ENSMUST00000067496 539 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trim43bP86448 Trpc2-201ENSMUST00000124189 2874 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trim43bP86448 Ahi1-201ENSMUST00000105525 4851 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trim43bP86448 Gm16070-203ENSMUST00000155588 1902 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Trim43bP86448 Reep2-201ENSMUST00000043484 1926 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trim43bP86448 Bbof1-201ENSMUST00000081828 2187 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trim43bP86448 Acadsb-201ENSMUST00000015829 6081 ntAPPRIS P2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trim43bP86448 Osbp2-203ENSMUST00000102950 3077 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trim43bP86448 Rspo3-201ENSMUST00000092623 3085 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trim43bP86448 Pabpc2-201ENSMUST00000063219 2586 ntAPPRIS P1 BASIC13.11□□□□□ -0.31
Trim43bP86448 Gm4858-202ENSMUST00000194595 1810 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Trim43bP86448 Cyp2b10-201ENSMUST00000005477 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trim43bP86448 Pprc1-201ENSMUST00000062322 5205 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trim43bP86448 Igsf5-202ENSMUST00000081093 1554 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Trim43bP86448 Limd2-201ENSMUST00000045923 2950 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trim43bP86448 Ralgps2-207ENSMUST00000188656 2481 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Trim43bP86448 Cacnb4-206ENSMUST00000178799 7981 ntTSL 5 BASIC13.1□□□□□ -0.31
Trim43bP86448 Trappc9-204ENSMUST00000170633 4688 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trim43bP86448 Tbc1d8-204ENSMUST00000193823 3512 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trim43bP86448 Cacna1g-208ENSMUST00000107790 8035 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trim43bP86448 Egr1-202ENSMUST00000165033 3036 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
Trim43bP86448 Nrd1-201ENSMUST00000065977 4311 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trim43bP86448 Pepd-201ENSMUST00000075068 1881 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trim43bP86448 Gm45011-201ENSMUST00000207620 2297 ntBASIC13.1□□□□□ -0.31
Trim43bP86448 Lmf2-201ENSMUST00000023283 2906 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trim43bP86448 Prkag3-202ENSMUST00000113672 2003 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Trim43bP86448 Nfya-212ENSMUST00000162460 3706 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trim43bP86448 Arr3-201ENSMUST00000113769 1359 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trim43bP86448 Esrp1-203ENSMUST00000108311 3864 ntTSL 5 BASIC13.1□□□□□ -0.31
Trim43bP86448 Nfe2-207ENSMUST00000134554 1761 ntAPPRIS P1 TSL 2 BASIC13.1□□□□□ -0.31
Trim43bP86448 Psmd9-201ENSMUST00000100729 2597 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trim43bP86448 Csrnp3-207ENSMUST00000145598 2566 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trim43bP86448 Ctsk-201ENSMUST00000015664 1512 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trim43bP86448 Ldha-214ENSMUST00000210815 1535 ntTSL 5 BASIC13.1□□□□□ -0.31
Trim43bP86448 Acy1-201ENSMUST00000024031 1529 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trim43bP86448 Hmbs-202ENSMUST00000097558 1534 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Trim43bP86448 Gm6210-201ENSMUST00000204734 1942 ntBASIC13.1□□□□□ -0.31
Trim43bP86448 Trpv6-203ENSMUST00000201471 2304 ntAPPRIS P2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trim43bP86448 Ndufaf7-201ENSMUST00000024887 2303 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trim43bP86448 Tmc8-204ENSMUST00000119455 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trim43bP86448 Nbeal2-211ENSMUST00000196488 8599 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
Trim43bP86448 Tomm5-204ENSMUST00000107810 639 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trim43bP86448 Gm38671-201ENSMUST00000200573 130 ntBASIC13.1□□□□□ -0.31
Trim43bP86448 AC156504.2-201ENSMUST00000213800 711 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Trim43bP86448 Akr1b7-201ENSMUST00000007449 1281 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trim43bP86448 Camkmt-201ENSMUST00000095188 972 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trim43bP86448 Cog6-201ENSMUST00000036665 3182 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trim43bP86448 Olfm2-201ENSMUST00000034692 1836 ntAPPRIS P2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trim43bP86448 Ptpru-201ENSMUST00000030741 4416 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 50.6 ms