Protein–RNA interactions for Protein: P82350

Sgca, Alpha-sarcoglycan, mousemouse

Predictions only

Length 387 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SgcaP82350 Grm1-202ENSMUST00000105560 4265 ntAPPRIS ALT2 TSL 1 (best) BASIC10.68□□□□□ -0.7
SgcaP82350 Capn3-205ENSMUST00000110719 2778 ntTSL 5 BASIC10.68□□□□□ -0.7
SgcaP82350 Gm2238-201ENSMUST00000192074 3669 ntBASIC10.68□□□□□ -0.7
SgcaP82350 Haus7-201ENSMUST00000033737 1380 ntAPPRIS P4 TSL 1 (best) BASIC10.68□□□□□ -0.7
SgcaP82350 Dolpp1-203ENSMUST00000123202 2294 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
SgcaP82350 Wasf2-202ENSMUST00000105912 2236 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
SgcaP82350 Bbof1-201ENSMUST00000081828 2187 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
SgcaP82350 Flnc-201ENSMUST00000065090 9038 ntAPPRIS P3 TSL 1 (best) BASIC10.68□□□□□ -0.7
SgcaP82350 Lhcgr-201ENSMUST00000024916 2553 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
SgcaP82350 Gm13716-201ENSMUST00000126401 808 ntTSL 5 BASIC10.68□□□□□ -0.7
SgcaP82350 Evx1-202ENSMUST00000129243 1034 ntTSL 3 BASIC10.68□□□□□ -0.7
SgcaP82350 Kctd18-210ENSMUST00000164963 2114 ntTSL 5 BASIC10.68□□□□□ -0.7
SgcaP82350 Gm7030-203ENSMUST00000173322 913 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
SgcaP82350 Gm26768-201ENSMUST00000181097 966 ntTSL 5 BASIC10.68□□□□□ -0.7
SgcaP82350 Gm43474-201ENSMUST00000196415 774 ntBASIC10.68□□□□□ -0.7
SgcaP82350 Gm44335-201ENSMUST00000196879 141 ntBASIC10.68□□□□□ -0.7
SgcaP82350 Myl10-204ENSMUST00000197186 607 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
SgcaP82350 Gm44297-201ENSMUST00000198304 141 ntBASIC10.68□□□□□ -0.7
SgcaP82350 Gm44346-201ENSMUST00000198851 141 ntBASIC10.68□□□□□ -0.7
SgcaP82350 CT943659.1-201ENSMUST00000215459 326 ntBASIC10.68□□□□□ -0.7
SgcaP82350 Gm5779-201ENSMUST00000218467 910 ntBASIC10.68□□□□□ -0.7
SgcaP82350 Gm30906-201ENSMUST00000219578 535 ntTSL 3 BASIC10.68□□□□□ -0.7
SgcaP82350 Sbk2-201ENSMUST00000032598 1139 ntAPPRIS P1 TSL 3 BASIC10.68□□□□□ -0.7
SgcaP82350 Fam173b-201ENSMUST00000042702 1164 ntAPPRIS P2 TSL 1 (best) BASIC10.68□□□□□ -0.7
SgcaP82350 Gm7030-201ENSMUST00000046131 913 ntAPPRIS P1 TSL 5 BASIC10.68□□□□□ -0.7
SgcaP82350 Rxfp4-201ENSMUST00000063119 1245 ntAPPRIS P1 BASIC10.68□□□□□ -0.7
SgcaP82350 Slbp-202ENSMUST00000075670 1027 ntAPPRIS ALT2 TSL 1 (best) BASIC10.68□□□□□ -0.7
SgcaP82350 Gm8225-201ENSMUST00000090257 879 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
SgcaP82350 Adcyap1-201ENSMUST00000064775 2088 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
SgcaP82350 Cdv3-203ENSMUST00000116517 3741 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
SgcaP82350 Arhgef16-207ENSMUST00000169623 2474 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
SgcaP82350 Sufu-201ENSMUST00000039922 4522 ntAPPRIS P3 TSL 1 (best) BASIC10.68□□□□□ -0.7
SgcaP82350 Shc1-201ENSMUST00000039110 3250 ntAPPRIS P3 TSL 1 (best) BASIC10.68□□□□□ -0.7
SgcaP82350 Smarcb1-202ENSMUST00000121304 1622 ntAPPRIS ALT1 TSL 1 (best) BASIC10.68□□□□□ -0.7
SgcaP82350 Atp1b2-201ENSMUST00000047889 2842 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
SgcaP82350 Peg10-202ENSMUST00000176204 6667 ntAPPRIS P2 TSL 2 BASIC10.68□□□□□ -0.7
SgcaP82350 Grin1-206ENSMUST00000114314 3882 ntTSL 5 BASIC10.68□□□□□ -0.7
SgcaP82350 Asap3-201ENSMUST00000047526 4225 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
SgcaP82350 Cd72-201ENSMUST00000030179 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC10.68□□□□□ -0.7
SgcaP82350 Hoxa1-201ENSMUST00000000964 2251 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
SgcaP82350 Dcun1d3-203ENSMUST00000106519 1475 ntAPPRIS P1 TSL 5 BASIC10.68□□□□□ -0.7
SgcaP82350 Psmd9-201ENSMUST00000100729 2597 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
SgcaP82350 Zfp341-201ENSMUST00000081926 3299 ntAPPRIS P2 TSL 1 (best) BASIC10.68□□□□□ -0.7
SgcaP82350 Tfcp2-201ENSMUST00000009877 3250 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
SgcaP82350 Mapk8ip3-204ENSMUST00000117509 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC10.67□□□□□ -0.7
SgcaP82350 Usp53-202ENSMUST00000197314 3586 ntTSL 5 BASIC10.67□□□□□ -0.7
SgcaP82350 Tacc2-201ENSMUST00000033141 3940 ntAPPRIS ALT2 TSL 5 BASIC10.67□□□□□ -0.7
SgcaP82350 Abat-201ENSMUST00000065987 4636 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
SgcaP82350 Lig1-210ENSMUST00000165964 3166 ntAPPRIS P1 TSL 5 BASIC10.67□□□□□ -0.7
SgcaP82350 Eml5-201ENSMUST00000065716 9482 ntTSL 5 BASIC10.67□□□□□ -0.7
SgcaP82350 Polr1b-201ENSMUST00000028874 2769 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
SgcaP82350 Gm44942-201ENSMUST00000096093 2072 ntBASIC10.67□□□□□ -0.7
SgcaP82350 Fam78a-201ENSMUST00000056406 4107 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
SgcaP82350 Camk2b-206ENSMUST00000101585 1650 ntTSL 5 BASIC10.67□□□□□ -0.7
SgcaP82350 3110062M04Rik-203ENSMUST00000115007 3326 ntAPPRIS P3 TSL 1 (best) BASIC10.67□□□□□ -0.7
SgcaP82350 Gtf2ird1-202ENSMUST00000074114 3330 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
SgcaP82350 2010315B03Rik-202ENSMUST00000177714 2623 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
SgcaP82350 Arnt2-213ENSMUST00000209133 6228 ntAPPRIS ALT2 TSL 5 BASIC10.67□□□□□ -0.7
SgcaP82350 Gtf2ird1-207ENSMUST00000111245 3299 ntAPPRIS ALT2 TSL 1 (best) BASIC10.67□□□□□ -0.7
SgcaP82350 Gm42840-201ENSMUST00000200303 2251 ntBASIC10.67□□□□□ -0.7
SgcaP82350 Chrnd-201ENSMUST00000073252 2925 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
SgcaP82350 Pabpc2-201ENSMUST00000063219 2586 ntAPPRIS P1 BASIC10.67□□□□□ -0.7
SgcaP82350 Tspan13-201ENSMUST00000020896 1932 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
SgcaP82350 Reep2-201ENSMUST00000043484 1926 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
SgcaP82350 Cep250-203ENSMUST00000109618 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC10.67□□□□□ -0.7
SgcaP82350 Cd99l2-204ENSMUST00000114587 973 ntAPPRIS ALT2 TSL 3 BASIC10.67□□□□□ -0.7
SgcaP82350 Gm6415-201ENSMUST00000118488 348 ntBASIC10.67□□□□□ -0.7
SgcaP82350 Gm11594-201ENSMUST00000122313 162 ntBASIC10.67□□□□□ -0.7
SgcaP82350 Ms4a6d-202ENSMUST00000125291 679 ntTSL 3 BASIC10.67□□□□□ -0.7
SgcaP82350 Gm11752-201ENSMUST00000143291 510 ntTSL 2 BASIC10.67□□□□□ -0.7
SgcaP82350 Gm13070-201ENSMUST00000146532 768 ntTSL 5 BASIC10.67□□□□□ -0.7
SgcaP82350 Tsen15-205ENSMUST00000162371 431 ntTSL 5 BASIC10.67□□□□□ -0.7
SgcaP82350 Gm24513-201ENSMUST00000174964 138 ntBASIC10.67□□□□□ -0.7
SgcaP82350 Rabep1-208ENSMUST00000179114 1264 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
SgcaP82350 1810026B05Rik-205ENSMUST00000184855 409 ntTSL 3 BASIC10.67□□□□□ -0.7
SgcaP82350 Gm28630-201ENSMUST00000187806 498 ntBASIC10.67□□□□□ -0.7
SgcaP82350 6030443J06Rik-204ENSMUST00000195898 786 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
SgcaP82350 Gm40123-201ENSMUST00000198175 1027 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
SgcaP82350 Gm42787-201ENSMUST00000200879 1164 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
SgcaP82350 Tpi-rs5-201ENSMUST00000216947 774 ntBASIC10.67□□□□□ -0.7
SgcaP82350 AC153937.4-201ENSMUST00000218479 661 ntTSL 3 BASIC10.67□□□□□ -0.7
SgcaP82350 Brk1-201ENSMUST00000035725 1095 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
SgcaP82350 Chchd10-201ENSMUST00000058906 939 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
SgcaP82350 BC003331-203ENSMUST00000097546 3174 ntAPPRIS ALT2 TSL 5 BASIC10.67□□□□□ -0.7
SgcaP82350 Adipor2-202ENSMUST00000169744 3489 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
SgcaP82350 C2cd5-204ENSMUST00000203187 3494 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
SgcaP82350 Gm26588-202ENSMUST00000181355 2538 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
SgcaP82350 Gm5648-201ENSMUST00000122244 1587 ntBASIC10.67□□□□□ -0.7
SgcaP82350 4933439K11Rik-203ENSMUST00000169111 1869 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
SgcaP82350 Pepd-201ENSMUST00000075068 1881 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
SgcaP82350 Ccdc114-201ENSMUST00000038720 2460 ntAPPRIS P2 TSL 1 (best) BASIC10.67□□□□□ -0.7
SgcaP82350 Edc4-202ENSMUST00000119261 4645 ntAPPRIS P3 TSL 1 (best) BASIC10.67□□□□□ -0.7
SgcaP82350 Ctnnbl1-201ENSMUST00000029178 2442 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
SgcaP82350 Hspa9-201ENSMUST00000025217 3049 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
SgcaP82350 Kif1a-201ENSMUST00000086819 5097 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
SgcaP82350 Rfx6-204ENSMUST00000219364 2682 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
SgcaP82350 Itga4-201ENSMUST00000099972 9767 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
SgcaP82350 Thrb-203ENSMUST00000091471 1758 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
SgcaP82350 Gsdma3-201ENSMUST00000073295 1477 ntAPPRIS P2 TSL 1 (best) BASIC10.67□□□□□ -0.7
SgcaP82350 Thrap3-201ENSMUST00000080919 4378 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Retrieved 100 of 76,532 protein–RNA pairs in 47.7 ms