Protein–RNA interactions for Protein: P70662

Ldb1, LIM domain-binding protein 1, mousemouse

Predictions only

Length 411 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ldb1P70662 Unc45a-201ENSMUST00000032748 3260 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Ldb1P70662 Vsir-203ENSMUST00000105460 4843 ntAPPRIS ALT1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Ldb1P70662 Vsir-201ENSMUST00000020301 4846 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
Ldb1P70662 Gm35339-201ENSMUST00000208833 5090 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
Ldb1P70662 Picalm-213ENSMUST00000208742 3361 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Ldb1P70662 Rabggtb-201ENSMUST00000089950 1381 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
Ldb1P70662 Dppa4-202ENSMUST00000096045 1534 ntAPPRIS P4 TSL 1 (best) BASIC12.67□□□□□ -0.38
Ldb1P70662 Ggnbp1-203ENSMUST00000133257 5012 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
Ldb1P70662 Kifc1-201ENSMUST00000114361 2260 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
Ldb1P70662 Srms-201ENSMUST00000016498 2562 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Ldb1P70662 Sh3bp2-201ENSMUST00000067638 2885 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
Ldb1P70662 Trim9-209ENSMUST00000222316 3049 ntTSL 2 BASIC12.67□□□□□ -0.38
Ldb1P70662 AC117194.1-201ENSMUST00000224847 3002 ntBASIC12.67□□□□□ -0.38
Ldb1P70662 Nsmce2-202ENSMUST00000168722 2679 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Ldb1P70662 Ppp2r2b-203ENSMUST00000120632 2081 ntAPPRIS ALT1 TSL 5 BASIC12.66□□□□□ -0.38
Ldb1P70662 Leprot-202ENSMUST00000106927 1754 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Ldb1P70662 Smpd2-201ENSMUST00000019965 1602 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Ldb1P70662 Nrsn2-201ENSMUST00000079278 1455 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Ldb1P70662 Rgs12-205ENSMUST00000114283 2628 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
Ldb1P70662 Myo18a-221ENSMUST00000167856 6132 ntTSL 5 BASIC12.66□□□□□ -0.38
Ldb1P70662 Cdk5rap1-203ENSMUST00000109731 2160 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
Ldb1P70662 Alg14-201ENSMUST00000039442 2037 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Ldb1P70662 Trim26-205ENSMUST00000130367 3187 ntAPPRIS P2 TSL 5 BASIC12.66□□□□□ -0.38
Ldb1P70662 Usp53-202ENSMUST00000197314 3586 ntTSL 5 BASIC12.66□□□□□ -0.38
Ldb1P70662 Skp1a-201ENSMUST00000037324 1440 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Ldb1P70662 Mpzl2-201ENSMUST00000034600 3107 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Ldb1P70662 D030025P21Rik-202ENSMUST00000220643 3987 ntBASIC12.66□□□□□ -0.38
Ldb1P70662 Trmt1-203ENSMUST00000109767 2138 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
Ldb1P70662 Isg20-204ENSMUST00000121645 1087 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Ldb1P70662 4930478K11Rik-201ENSMUST00000181875 715 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Ldb1P70662 Gm27682-201ENSMUST00000183930 110 ntBASIC12.66□□□□□ -0.38
Ldb1P70662 1700065I16Rik-202ENSMUST00000185477 813 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Ldb1P70662 Gm6266-201ENSMUST00000203844 806 ntBASIC12.66□□□□□ -0.38
Ldb1P70662 Gm9299-201ENSMUST00000206392 1140 ntBASIC12.66□□□□□ -0.38
Ldb1P70662 Coprs-202ENSMUST00000209371 601 ntTSL 3 BASIC12.66□□□□□ -0.38
Ldb1P70662 Pfdn1-201ENSMUST00000025204 1077 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Ldb1P70662 Med27-201ENSMUST00000028139 1254 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Ldb1P70662 Pemt-201ENSMUST00000000310 953 ntAPPRIS P1 TSL 3 BASIC12.66□□□□□ -0.38
Ldb1P70662 Ccdc113-201ENSMUST00000041569 1288 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Ldb1P70662 Lgals8-203ENSMUST00000124888 2843 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Ldb1P70662 Eprs-201ENSMUST00000046514 4906 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Ldb1P70662 Slc31a2-201ENSMUST00000084530 1820 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
Ldb1P70662 Msi2-203ENSMUST00000107909 6436 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Ldb1P70662 Brwd1-201ENSMUST00000023631 8209 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Ldb1P70662 Sp7-201ENSMUST00000078508 2906 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Ldb1P70662 Pbld2-201ENSMUST00000020262 2212 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Ldb1P70662 Wsb2-202ENSMUST00000111959 1526 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Ldb1P70662 Sertad2-203ENSMUST00000109586 5515 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Ldb1P70662 Gm12132-201ENSMUST00000130945 1391 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Ldb1P70662 Slc35g3-201ENSMUST00000102586 1618 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Ldb1P70662 Lrrfip1-202ENSMUST00000068167 2849 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
Ldb1P70662 Jmjd8-205ENSMUST00000133595 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Ldb1P70662 Fgf12-201ENSMUST00000100024 3065 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Ldb1P70662 Hid1-202ENSMUST00000106542 3276 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
Ldb1P70662 Dgkg-201ENSMUST00000023578 2725 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Ldb1P70662 Uimc1-202ENSMUST00000099496 1678 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Ldb1P70662 Gal3st4-203ENSMUST00000161647 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Ldb1P70662 Dido1-202ENSMUST00000087517 8723 ntAPPRIS P4 TSL 1 (best) BASIC12.65□□□□□ -0.38
Ldb1P70662 Gm45266-201ENSMUST00000210111 2173 ntBASIC12.65□□□□□ -0.38
Ldb1P70662 Nrxn1-207ENSMUST00000160844 9309 ntAPPRIS P2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Ldb1P70662 Spatc1l-202ENSMUST00000105414 1060 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Ldb1P70662 Qdpr-203ENSMUST00000118097 1232 ntTSL 5 BASIC12.65□□□□□ -0.38
Ldb1P70662 Gm1335-201ENSMUST00000121653 386 ntBASIC12.65□□□□□ -0.38
Ldb1P70662 Pax5-206ENSMUST00000134968 969 ntTSL 5 BASIC12.65□□□□□ -0.38
Ldb1P70662 Ndufa2-201ENSMUST00000014438 572 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Ldb1P70662 Borcs5-202ENSMUST00000166591 792 ntTSL 2 BASIC12.65□□□□□ -0.38
Ldb1P70662 Gm23363-201ENSMUST00000175024 79 ntBASIC12.65□□□□□ -0.38
Ldb1P70662 Gm38230-201ENSMUST00000193572 1159 ntBASIC12.65□□□□□ -0.38
Ldb1P70662 Plin1-203ENSMUST00000205413 1294 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Ldb1P70662 0610005C13Rik-209ENSMUST00000211209 974 ntTSL 2 BASIC12.65□□□□□ -0.38
Ldb1P70662 Gm40466-201ENSMUST00000212174 422 ntBASIC12.65□□□□□ -0.38
Ldb1P70662 Mien1-201ENSMUST00000002655 747 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Ldb1P70662 Bcdin3d-201ENSMUST00000040313 1271 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Ldb1P70662 Gm10268-201ENSMUST00000085340 555 ntBASIC12.65□□□□□ -0.38
Ldb1P70662 Gdf9-201ENSMUST00000018382 1793 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Ldb1P70662 Irs4-201ENSMUST00000067841 6294 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Ldb1P70662 Sufu-204ENSMUST00000120778 1850 ntTSL 2 BASIC12.65□□□□□ -0.38
Ldb1P70662 Bak1-202ENSMUST00000078691 2387 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Ldb1P70662 Gucy2e-201ENSMUST00000021259 8331 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.38
Ldb1P70662 Cox19-201ENSMUST00000049630 2461 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Ldb1P70662 Cdk7-201ENSMUST00000091299 1988 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Ldb1P70662 Ube2a-201ENSMUST00000016452 1732 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
Ldb1P70662 Gm15897-201ENSMUST00000117770 1486 ntBASIC12.65□□□□□ -0.38
Ldb1P70662 Gm44775-201ENSMUST00000207266 1456 ntBASIC12.65□□□□□ -0.38
Ldb1P70662 Tmem201-203ENSMUST00000105687 3697 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.39
Ldb1P70662 Mast1-202ENSMUST00000119820 2078 ntTSL 5 BASIC12.65□□□□□ -0.39
Ldb1P70662 Gm44758-201ENSMUST00000206096 2068 ntBASIC12.65□□□□□ -0.39
Ldb1P70662 Zfp862-ps-204ENSMUST00000204484 6065 ntTSL 1 (best) BASIC12.65□□□□□ -0.39
Ldb1P70662 Ky-201ENSMUST00000039390 5837 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Ldb1P70662 Asap1-201ENSMUST00000023008 4580 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
Ldb1P70662 Fcrls-201ENSMUST00000090986 2273 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Ldb1P70662 Stard5-202ENSMUST00000117410 2832 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Ldb1P70662 Syngr2-201ENSMUST00000026649 1520 ntAPPRIS P2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Ldb1P70662 Nxph1-201ENSMUST00000060369 2578 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Ldb1P70662 Wnt16-202ENSMUST00000128245 3285 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Ldb1P70662 Adtrp-202ENSMUST00000121404 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Ldb1P70662 Gm28590-201ENSMUST00000185679 1609 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Ldb1P70662 Anapc15-204ENSMUST00000106973 650 ntAPPRIS P1 TSL 2 BASIC12.64□□□□□ -0.39
Ldb1P70662 9230102O04Rik-201ENSMUST00000114915 528 ntAPPRIS P1 TSL 2 BASIC12.64□□□□□ -0.39
Ldb1P70662 Gm11751-201ENSMUST00000126187 460 ntTSL 3 BASIC12.64□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 40.8 ms