Protein–RNA interactions for Protein: P63006

Lhx1, LIM/homeobox protein Lhx1, mousemouse

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lhx1P63006 1500009C09Rik-201ENSMUST00000136948 1526 ntAPPRIS P5 TSL 3 BASIC12.51□□□□□ -0.41
Lhx1P63006 Mfsd4b5-205ENSMUST00000170579 1554 ntAPPRIS P1 TSL 2 BASIC12.51□□□□□ -0.41
Lhx1P63006 Cacna1g-208ENSMUST00000107790 8035 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Lhx1P63006 Hpcal4-202ENSMUST00000106246 1627 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
Lhx1P63006 Aste1-201ENSMUST00000035181 2755 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
Lhx1P63006 Ilvbl-208ENSMUST00000218875 3020 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Lhx1P63006 Hsd3b7-201ENSMUST00000046863 1828 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Lhx1P63006 Mdm4-201ENSMUST00000067398 1914 ntAPPRIS ALT1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Lhx1P63006 Spon1-201ENSMUST00000046687 6161 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Lhx1P63006 Gart-201ENSMUST00000023684 3518 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Lhx1P63006 Cyyr1-201ENSMUST00000114174 5464 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Lhx1P63006 Nmral1-204ENSMUST00000120056 2440 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Lhx1P63006 Sall4-202ENSMUST00000075044 2534 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Lhx1P63006 Gpc2-205ENSMUST00000161827 2586 ntAPPRIS P2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Lhx1P63006 Metap2-206ENSMUST00000180840 2551 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Lhx1P63006 Adat3-201ENSMUST00000178231 4516 ntAPPRIS P1 TSL 2 BASIC12.5□□□□□ -0.41
Lhx1P63006 Arid5a-204ENSMUST00000115032 4640 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
Lhx1P63006 Emb-201ENSMUST00000022242 2923 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Lhx1P63006 Gata2-202ENSMUST00000170089 3135 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Lhx1P63006 Eif4g3-204ENSMUST00000105830 3252 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Lhx1P63006 Ripor2-201ENSMUST00000038477 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Lhx1P63006 Hspa12b-201ENSMUST00000099349 3413 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Lhx1P63006 Dcaf7-201ENSMUST00000058438 5750 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Lhx1P63006 Ppl-201ENSMUST00000035672 6277 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Lhx1P63006 Uspl1-205ENSMUST00000121416 3792 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Lhx1P63006 Gm15703-201ENSMUST00000120250 880 ntBASIC12.5□□□□□ -0.41
Lhx1P63006 Gm12678-201ENSMUST00000154177 692 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Lhx1P63006 Gm27023-201ENSMUST00000182372 285 ntBASIC12.5□□□□□ -0.41
Lhx1P63006 Ube2a-202ENSMUST00000200835 911 ntTSL 5 BASIC12.5□□□□□ -0.41
Lhx1P63006 Ube2a-209ENSMUST00000202991 715 ntAPPRIS ALT1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Lhx1P63006 Gm3402-201ENSMUST00000036715 981 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.41
Lhx1P63006 Ggact-201ENSMUST00000038075 1076 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Lhx1P63006 Polr2e-201ENSMUST00000004786 1148 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Lhx1P63006 9430041J12Rik-201ENSMUST00000050989 534 ntBASIC12.5□□□□□ -0.41
Lhx1P63006 Nup98-201ENSMUST00000070165 4052 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Lhx1P63006 Chchd3-202ENSMUST00000115091 1363 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Lhx1P63006 Oas1f-201ENSMUST00000057814 1480 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Lhx1P63006 Tmem17-201ENSMUST00000059319 1568 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Lhx1P63006 Gpr19-203ENSMUST00000111932 1711 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Lhx1P63006 Rgs12-201ENSMUST00000030984 5472 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
Lhx1P63006 Zfp819-203ENSMUST00000120935 2156 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Lhx1P63006 Rasl12-201ENSMUST00000085453 2390 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Lhx1P63006 Adgrg3-201ENSMUST00000051259 2439 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Lhx1P63006 Oxa1l-201ENSMUST00000000985 2538 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Lhx1P63006 Col9a3-201ENSMUST00000103059 2846 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Lhx1P63006 Hsph1-205ENSMUST00000201452 3140 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Lhx1P63006 Ficd-201ENSMUST00000065698 3133 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Lhx1P63006 Chrdl1-203ENSMUST00000112878 4050 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.41
Lhx1P63006 Mtmr3-201ENSMUST00000040448 5534 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
Lhx1P63006 Dcaf10-204ENSMUST00000155551 7250 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Lhx1P63006 Eya1-201ENSMUST00000027066 4347 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
Lhx1P63006 Arhgef37-201ENSMUST00000171629 3234 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
Lhx1P63006 Sgsm3-208ENSMUST00000139517 2996 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Lhx1P63006 Rab11fip1-202ENSMUST00000054212 7965 ntAPPRIS P3 TSL 5 BASIC12.49□□□□□ -0.41
Lhx1P63006 Specc1-209ENSMUST00000201671 2523 ntTSL 5 BASIC12.49□□□□□ -0.41
Lhx1P63006 Naaladl1-201ENSMUST00000044451 2491 ntAPPRIS P1 TSL 2 BASIC12.49□□□□□ -0.41
Lhx1P63006 Rad9b-202ENSMUST00000117263 2371 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Lhx1P63006 Tmprss11d-202ENSMUST00000122377 2256 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Lhx1P63006 Gm36356-201ENSMUST00000209224 2277 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Lhx1P63006 Alg14-201ENSMUST00000039442 2037 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Lhx1P63006 Olfr56-201ENSMUST00000056759 1925 ntTSL 5 BASIC12.49□□□□□ -0.41
Lhx1P63006 Plk-ps1-201ENSMUST00000119494 1787 ntBASIC12.49□□□□□ -0.41
Lhx1P63006 Ppip5k1-202ENSMUST00000110625 5226 ntAPPRIS ALT2 TSL 5 BASIC12.49□□□□□ -0.41
Lhx1P63006 Sox11-201ENSMUST00000079063 8311 ntAPPRIS P1 BASIC12.49□□□□□ -0.41
Lhx1P63006 Brd2-201ENSMUST00000025193 4374 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Lhx1P63006 Stt3b-201ENSMUST00000035010 4221 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Lhx1P63006 Coa4-201ENSMUST00000054310 1391 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Lhx1P63006 Ifna7-201ENSMUST00000105143 573 ntAPPRIS P1 BASIC12.49□□□□□ -0.41
Lhx1P63006 Ufc1-202ENSMUST00000111302 914 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Lhx1P63006 0610037L13Rik-205ENSMUST00000119394 741 ntTSL 3 BASIC12.49□□□□□ -0.41
Lhx1P63006 Gm13350-201ENSMUST00000120519 479 ntBASIC12.49□□□□□ -0.41
Lhx1P63006 Gm14726-201ENSMUST00000120623 896 ntBASIC12.49□□□□□ -0.41
Lhx1P63006 Gm16087-201ENSMUST00000124395 964 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Lhx1P63006 Crb3-205ENSMUST00000169543 778 ntAPPRIS ALT2 TSL 2 BASIC12.49□□□□□ -0.41
Lhx1P63006 4833427G06Rik-201ENSMUST00000170947 973 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Lhx1P63006 Anapc16-205ENSMUST00000182912 566 ntTSL 2 BASIC12.49□□□□□ -0.41
Lhx1P63006 Gm7895-201ENSMUST00000187459 1173 ntBASIC12.49□□□□□ -0.41
Lhx1P63006 Gm8176-201ENSMUST00000191297 1099 ntBASIC12.49□□□□□ -0.41
Lhx1P63006 Gm37201-201ENSMUST00000191845 523 ntBASIC12.49□□□□□ -0.41
Lhx1P63006 Gm30285-201ENSMUST00000214614 422 ntBASIC12.49□□□□□ -0.41
Lhx1P63006 AC093022.5-201ENSMUST00000226841 1079 ntBASIC12.49□□□□□ -0.41
Lhx1P63006 Ctrc-201ENSMUST00000037059 951 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
Lhx1P63006 Trpt1-201ENSMUST00000088223 1142 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Lhx1P63006 Olfr1209-201ENSMUST00000099809 933 ntAPPRIS P1 BASIC12.49□□□□□ -0.41
Lhx1P63006 Ddx46-202ENSMUST00000172272 5676 ntAPPRIS P2 TSL 5 BASIC12.49□□□□□ -0.41
Lhx1P63006 Ddx46-201ENSMUST00000099479 5664 ntAPPRIS ALT2 TSL 5 BASIC12.49□□□□□ -0.41
Lhx1P63006 Zeb2-201ENSMUST00000028229 5335 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Lhx1P63006 Mgat1-202ENSMUST00000101293 2729 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Lhx1P63006 Bend3-201ENSMUST00000040147 5882 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Lhx1P63006 Ptk2-201ENSMUST00000110036 4184 ntAPPRIS P2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Lhx1P63006 0610010F05Rik-208ENSMUST00000180260 4128 ntAPPRIS P2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Lhx1P63006 Arcn1-201ENSMUST00000034607 4072 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Lhx1P63006 CT030684.3-201ENSMUST00000227308 2445 ntBASIC12.49□□□□□ -0.41
Lhx1P63006 Micu1-201ENSMUST00000020311 2336 ntTSL 5 BASIC12.49□□□□□ -0.41
Lhx1P63006 Gm45706-201ENSMUST00000213063 2136 ntBASIC12.49□□□□□ -0.41
Lhx1P63006 Jmjd8-201ENSMUST00000026832 2091 ntAPPRIS P2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Lhx1P63006 Map7d1-201ENSMUST00000061143 3351 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
Lhx1P63006 Pcdha2-202ENSMUST00000195590 4645 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Lhx1P63006 Suv39h1-203ENSMUST00000115638 3116 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Lhx1P63006 Skp2-203ENSMUST00000190131 1819 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 47.8 ms