Protein–RNA interactions for Protein: P59235

Nup43, Nucleoporin Nup43, mousemouse

Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup43P59235 Vmp1-201ENSMUST00000018315 2787 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Nup43P59235 Rps13-203ENSMUST00000205490 1317 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Nup43P59235 Gm28590-201ENSMUST00000185679 1609 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Nup43P59235 Actn1-201ENSMUST00000021554 3734 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Nup43P59235 Cap2-201ENSMUST00000021802 3713 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Nup43P59235 Jrk-201ENSMUST00000050234 5853 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Nup43P59235 Uchl1os-201ENSMUST00000152002 1685 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Nup43P59235 Plekhd1-201ENSMUST00000140770 3535 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Nup43P59235 Esrrb-203ENSMUST00000110204 4196 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Nup43P59235 Capn9-201ENSMUST00000093033 2330 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Nup43P59235 4933406P04Rik-201ENSMUST00000092680 1789 ntBASIC12.02□□□□□ -0.48
Nup43P59235 Chrna3-201ENSMUST00000034851 4358 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Nup43P59235 Trpv4-204ENSMUST00000112222 2475 ntTSL 5 BASIC12.02□□□□□ -0.48
Nup43P59235 Kmt5b-205ENSMUST00000113972 4159 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.48
Nup43P59235 Spop-202ENSMUST00000107724 2881 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Nup43P59235 Gm42840-201ENSMUST00000200303 2251 ntBASIC12.02□□□□□ -0.49
Nup43P59235 Arhgap10-202ENSMUST00000210519 2295 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Nup43P59235 Tmem17-201ENSMUST00000059319 1568 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Nup43P59235 Slc29a1-203ENSMUST00000097317 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Nup43P59235 P2rx6-201ENSMUST00000023441 2345 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Nup43P59235 Prrxl1-201ENSMUST00000068938 1610 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Nup43P59235 Tspyl3-201ENSMUST00000099194 3072 ntAPPRIS P1 BASIC12.02□□□□□ -0.49
Nup43P59235 Ccdc162-208ENSMUST00000179614 2739 ntTSL 5 BASIC12.02□□□□□ -0.49
Nup43P59235 Elovl1-203ENSMUST00000102673 1248 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Nup43P59235 Snhg9-201ENSMUST00000161706 183 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Nup43P59235 Gm3890-201ENSMUST00000182416 207 ntBASIC12.02□□□□□ -0.49
Nup43P59235 Gm19184-201ENSMUST00000196798 928 ntBASIC12.02□□□□□ -0.49
Nup43P59235 Gm44756-201ENSMUST00000206172 1069 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Nup43P59235 Gm34084-201ENSMUST00000222236 1298 ntTSL 5 BASIC12.02□□□□□ -0.49
Nup43P59235 Mal-201ENSMUST00000028853 486 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Nup43P59235 Hvcn1-201ENSMUST00000072602 2790 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Nup43P59235 Hnrnph1-203ENSMUST00000109142 2427 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Nup43P59235 Rbm14-201ENSMUST00000006625 3165 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Nup43P59235 Bcat2-203ENSMUST00000209204 2081 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Nup43P59235 Gm14866-201ENSMUST00000149206 2118 ntTSL 2 BASIC12.02□□□□□ -0.49
Nup43P59235 Gne-209ENSMUST00000173234 2149 ntTSL 5 BASIC12.02□□□□□ -0.49
Nup43P59235 Gm37885-201ENSMUST00000192568 1391 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Nup43P59235 Rph3al-204ENSMUST00000121287 2199 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.49
Nup43P59235 Gm8228-201ENSMUST00000189949 2192 ntBASIC12.02□□□□□ -0.49
Nup43P59235 AC241621.2-201ENSMUST00000223991 2151 ntBASIC12.02□□□□□ -0.49
Nup43P59235 Adora1-202ENSMUST00000086465 4968 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Nup43P59235 Atg7-207ENSMUST00000182428 2264 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.49
Nup43P59235 Ccdc116-203ENSMUST00000115711 1915 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Nup43P59235 Asap1-201ENSMUST00000023008 4580 ntAPPRIS ALT2 TSL 5 BASIC12.01□□□□□ -0.49
Nup43P59235 Ahcyl2-205ENSMUST00000125911 2039 ntTSL 5 BASIC12.01□□□□□ -0.49
Nup43P59235 Sh3bp2-207ENSMUST00000179943 2935 ntAPPRIS P3 TSL 1 (best) BASIC12.01□□□□□ -0.49
Nup43P59235 Gm28323-201ENSMUST00000186817 2499 ntBASIC12.01□□□□□ -0.49
Nup43P59235 Cenpo-201ENSMUST00000020981 2037 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Nup43P59235 Gm36745-201ENSMUST00000213455 1594 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Nup43P59235 Necap1-201ENSMUST00000032477 2476 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Nup43P59235 Zbtb1-201ENSMUST00000042779 12190 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Nup43P59235 Cdc45-201ENSMUST00000000028 2143 ntAPPRIS P3 TSL 1 (best) BASIC12.01□□□□□ -0.49
Nup43P59235 5830462O15Rik-201ENSMUST00000214603 1655 ntBASIC12.01□□□□□ -0.49
Nup43P59235 Aifm3-201ENSMUST00000023448 2688 ntAPPRIS P3 TSL 1 (best) BASIC12.01□□□□□ -0.49
Nup43P59235 Hspb7-201ENSMUST00000102486 2769 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Nup43P59235 Arfip1-201ENSMUST00000098990 2799 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Nup43P59235 Eps8l3-201ENSMUST00000037375 2271 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Nup43P59235 Nox3-201ENSMUST00000115800 1792 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Nup43P59235 Gm22018-201ENSMUST00000104357 131 ntBASIC12.01□□□□□ -0.49
Nup43P59235 Fzr1-202ENSMUST00000118812 1215 ntTSL 5 BASIC12.01□□□□□ -0.49
Nup43P59235 Gm9431-201ENSMUST00000119765 1051 ntBASIC12.01□□□□□ -0.49
Nup43P59235 Gm13492-201ENSMUST00000119772 665 ntBASIC12.01□□□□□ -0.49
Nup43P59235 Fuom-203ENSMUST00000121115 872 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Nup43P59235 Oaz2-ps-201ENSMUST00000121735 537 ntBASIC12.01□□□□□ -0.49
Nup43P59235 6330418K02Rik-201ENSMUST00000124298 743 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Nup43P59235 Gm14285-201ENSMUST00000146049 380 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Nup43P59235 Fhit-206ENSMUST00000162278 981 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Nup43P59235 U2af1l4-206ENSMUST00000163654 781 ntTSL 2 BASIC12.01□□□□□ -0.49
Nup43P59235 Gm17420-201ENSMUST00000164753 153 ntBASIC12.01□□□□□ -0.49
Nup43P59235 U2af1l4-221ENSMUST00000167361 860 ntTSL 2 BASIC12.01□□□□□ -0.49
Nup43P59235 Ovol3-201ENSMUST00000189482 731 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
Nup43P59235 Tmem176b-206ENSMUST00000203355 1202 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
Nup43P59235 Aprt-203ENSMUST00000211823 590 ntTSL 3 BASIC12.01□□□□□ -0.49
Nup43P59235 Mt3-203ENSMUST00000211930 477 ntTSL 2 BASIC12.01□□□□□ -0.49
Nup43P59235 Gm17823-201ENSMUST00000217830 1006 ntBASIC12.01□□□□□ -0.49
Nup43P59235 Gm5781-201ENSMUST00000219792 443 ntBASIC12.01□□□□□ -0.49
Nup43P59235 Net1-207ENSMUST00000223258 597 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Nup43P59235 Dph3-201ENSMUST00000022461 1057 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Nup43P59235 Gm9949-201ENSMUST00000067743 962 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Nup43P59235 Krtap19-2-201ENSMUST00000076186 605 ntAPPRIS P1 BASIC12.01□□□□□ -0.49
Nup43P59235 Ptpru-201ENSMUST00000030741 4416 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
Nup43P59235 Klhl18-201ENSMUST00000068025 4530 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Nup43P59235 4933439K11Rik-203ENSMUST00000169111 1869 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Nup43P59235 Pla2g6-201ENSMUST00000047816 2963 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Nup43P59235 Zfp536-201ENSMUST00000056338 4621 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Nup43P59235 Prickle1-202ENSMUST00000109255 4144 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Nup43P59235 Stx18-203ENSMUST00000114126 3002 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Nup43P59235 Snx14-207ENSMUST00000174806 3082 ntAPPRIS ALT2 TSL 5 BASIC12.01□□□□□ -0.49
Nup43P59235 Ablim2-209ENSMUST00000129347 1995 ntAPPRIS ALT2 TSL 5 BASIC12.01□□□□□ -0.49
Nup43P59235 AC153366.2-201ENSMUST00000219461 1984 ntBASIC12.01□□□□□ -0.49
Nup43P59235 Cd74-202ENSMUST00000097563 1410 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Nup43P59235 Myh3-202ENSMUST00000108689 6031 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
Nup43P59235 Fancc-218ENSMUST00000220684 2006 ntTSL 5 BASIC12.01□□□□□ -0.49
Nup43P59235 Rnf224-201ENSMUST00000091318 2021 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Nup43P59235 Slc39a8-201ENSMUST00000029810 3203 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Nup43P59235 Pdss2-202ENSMUST00000159139 1467 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Nup43P59235 Slc34a3-201ENSMUST00000006638 2183 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Nup43P59235 Mcph1-201ENSMUST00000039412 4662 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Nup43P59235 Cavin1-201ENSMUST00000060792 3491 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Nup43P59235 Hdgfl2-210ENSMUST00000225843 2238 ntAPPRIS ALT2 BASIC12.01□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 40.3 ms