Protein–RNA interactions for Protein: P58854

Tubgcp3, Gamma-tubulin complex component 3, mousemouse

Predictions only

Length 905 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tubgcp3P58854 Hdhd3-201ENSMUST00000037820 1205 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Tubgcp3P58854 Olfr1423-201ENSMUST00000087831 933 ntAPPRIS P1 BASIC13.01□□□□□ -0.33
Tubgcp3P58854 Mirg-202ENSMUST00000181543 1300 ntTSL 5 BASIC13.01□□□□□ -0.33
Tubgcp3P58854 Vwa7-201ENSMUST00000007245 4313 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
Tubgcp3P58854 Art3-206ENSMUST00000120416 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Tubgcp3P58854 Rfx7-203ENSMUST00000183372 1457 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Tubgcp3P58854 Nmral1-202ENSMUST00000079130 1459 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Tubgcp3P58854 Aire-216ENSMUST00000156417 1627 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Tubgcp3P58854 Mettl17-201ENSMUST00000047899 1623 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Tubgcp3P58854 Marco-201ENSMUST00000027639 1925 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Tubgcp3P58854 F2-202ENSMUST00000111335 1969 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
Tubgcp3P58854 AC123834.1-201ENSMUST00000225346 2043 ntBASIC13.01□□□□□ -0.33
Tubgcp3P58854 Rapgef2-201ENSMUST00000118100 6573 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Tubgcp3P58854 Tmem206-201ENSMUST00000027940 2246 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Tubgcp3P58854 AC125108.1-201ENSMUST00000218986 2330 ntBASIC13.01□□□□□ -0.33
Tubgcp3P58854 Prex1-203ENSMUST00000109246 2386 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Tubgcp3P58854 Trim29-201ENSMUST00000034511 2735 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Tubgcp3P58854 Sh3bp5l-202ENSMUST00000116376 3016 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Tubgcp3P58854 Lrrc20-201ENSMUST00000049242 3216 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Tubgcp3P58854 Osbpl7-201ENSMUST00000090020 3771 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Tubgcp3P58854 Abca7-202ENSMUST00000132517 6696 ntAPPRIS P3 TSL 5 BASIC13.01□□□□□ -0.33
Tubgcp3P58854 Sidt1-205ENSMUST00000136381 4404 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
Tubgcp3P58854 Fyttd1-201ENSMUST00000023489 4312 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Tubgcp3P58854 C030034I22Rik-202ENSMUST00000188481 4231 ntBASIC13□□□□□ -0.33
Tubgcp3P58854 Apaf1-207ENSMUST00000161987 2710 ntTSL 1 (best) BASIC13□□□□□ -0.33
Tubgcp3P58854 Tmem25-201ENSMUST00000002100 2448 ntAPPRIS P2 TSL 1 (best) BASIC13□□□□□ -0.33
Tubgcp3P58854 Pik3r1-202ENSMUST00000055518 7113 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Tubgcp3P58854 Rtkn2-203ENSMUST00000117086 2246 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Tubgcp3P58854 Naga-201ENSMUST00000023088 1913 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Tubgcp3P58854 Avpr2-201ENSMUST00000033765 1812 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Tubgcp3P58854 Leprot-202ENSMUST00000106927 1754 ntTSL 1 (best) BASIC13□□□□□ -0.33
Tubgcp3P58854 Wwtr1-201ENSMUST00000029380 4697 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
Tubgcp3P58854 Kdm4a-202ENSMUST00000097911 4550 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Tubgcp3P58854 H1fnt-201ENSMUST00000060855 1326 ntAPPRIS P1 BASIC13□□□□□ -0.33
Tubgcp3P58854 Car15-201ENSMUST00000118960 1283 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Tubgcp3P58854 Drap1-209ENSMUST00000136579 734 ntTSL 2 BASIC13□□□□□ -0.33
Tubgcp3P58854 Klk12-201ENSMUST00000014063 924 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Tubgcp3P58854 Gm24644-201ENSMUST00000157114 139 ntBASIC13□□□□□ -0.33
Tubgcp3P58854 Gm17208-201ENSMUST00000168388 535 ntBASIC13□□□□□ -0.33
Tubgcp3P58854 Mhrt-201ENSMUST00000181782 828 ntTSL 2 BASIC13□□□□□ -0.33
Tubgcp3P58854 Gm5896-201ENSMUST00000189662 1024 ntBASIC13□□□□□ -0.33
Tubgcp3P58854 Myl10-202ENSMUST00000196068 911 ntTSL 1 (best) BASIC13□□□□□ -0.33
Tubgcp3P58854 Myl10-203ENSMUST00000196436 598 ntTSL 3 BASIC13□□□□□ -0.33
Tubgcp3P58854 Gm43597-201ENSMUST00000201650 1057 ntTSL 3 BASIC13□□□□□ -0.33
Tubgcp3P58854 Gm43416-201ENSMUST00000201916 1015 ntBASIC13□□□□□ -0.33
Tubgcp3P58854 Gm44799-201ENSMUST00000207639 1202 ntBASIC13□□□□□ -0.33
Tubgcp3P58854 A430005L14Rik-201ENSMUST00000058393 1098 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Tubgcp3P58854 Alkbh7-202ENSMUST00000074141 736 ntTSL 1 (best) BASIC13□□□□□ -0.33
Tubgcp3P58854 Mir339-201ENSMUST00000083659 96 ntBASIC13□□□□□ -0.33
Tubgcp3P58854 S100a16-201ENSMUST00000098910 1123 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Tubgcp3P58854 Chpf2-202ENSMUST00000121863 3715 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
Tubgcp3P58854 Ripor3-201ENSMUST00000099073 3580 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Tubgcp3P58854 Pkp3-201ENSMUST00000066873 2848 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
Tubgcp3P58854 Tmem104-202ENSMUST00000100235 4561 ntAPPRIS ALT1 TSL 1 (best) BASIC13□□□□□ -0.33
Tubgcp3P58854 Tmem104-201ENSMUST00000061450 4564 ntAPPRIS P2 TSL 1 (best) BASIC13□□□□□ -0.33
Tubgcp3P58854 Arhgap22-202ENSMUST00000111956 2596 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Tubgcp3P58854 Mtus2-203ENSMUST00000085558 7543 ntTSL 1 (best) BASIC13□□□□□ -0.33
Tubgcp3P58854 Tjap1-201ENSMUST00000012440 2426 ntAPPRIS P2 TSL 1 (best) BASIC13□□□□□ -0.33
Tubgcp3P58854 Tnfrsf22-203ENSMUST00000146692 2298 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
Tubgcp3P58854 Pde4d-205ENSMUST00000119507 2163 ntTSL 5 BASIC13□□□□□ -0.33
Tubgcp3P58854 Mdm4-201ENSMUST00000067398 1914 ntAPPRIS ALT1 TSL 1 (best) BASIC13□□□□□ -0.33
Tubgcp3P58854 Slc29a1-203ENSMUST00000097317 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Tubgcp3P58854 Xkr8-201ENSMUST00000045550 4245 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Tubgcp3P58854 Itpr3-201ENSMUST00000049308 8990 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Tubgcp3P58854 Nfe2-207ENSMUST00000134554 1761 ntAPPRIS P1 TSL 2 BASIC12.99□□□□□ -0.33
Tubgcp3P58854 Rbp3-201ENSMUST00000035695 5295 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Tubgcp3P58854 Adtrp-202ENSMUST00000121404 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Tubgcp3P58854 Nub1-202ENSMUST00000197407 3546 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Tubgcp3P58854 Pou5f2-201ENSMUST00000175955 1394 ntAPPRIS P1 BASIC12.99□□□□□ -0.33
Tubgcp3P58854 Med28-203ENSMUST00000119579 636 ntTSL 3 BASIC12.99□□□□□ -0.33
Tubgcp3P58854 Pou2f3-rs1-201ENSMUST00000120271 1046 ntBASIC12.99□□□□□ -0.33
Tubgcp3P58854 Gm13066-201ENSMUST00000145263 884 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Tubgcp3P58854 Ssr4-208ENSMUST00000166518 800 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Tubgcp3P58854 Gm37042-201ENSMUST00000193816 581 ntBASIC12.99□□□□□ -0.33
Tubgcp3P58854 Fam168a-206ENSMUST00000208013 1129 ntTSL 5 BASIC12.99□□□□□ -0.33
Tubgcp3P58854 Gm7561-201ENSMUST00000211203 886 ntBASIC12.99□□□□□ -0.33
Tubgcp3P58854 Lamtor2-201ENSMUST00000029698 668 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Tubgcp3P58854 Dmac1-201ENSMUST00000030103 741 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Tubgcp3P58854 Ndufa3-201ENSMUST00000076657 515 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Tubgcp3P58854 Gng8-201ENSMUST00000078182 910 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Tubgcp3P58854 Gm6091-201ENSMUST00000098307 165 ntBASIC12.99□□□□□ -0.33
Tubgcp3P58854 Tgm1-202ENSMUST00000168729 2852 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
Tubgcp3P58854 Zfp641-201ENSMUST00000023722 4212 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Tubgcp3P58854 Slx4-201ENSMUST00000040790 5706 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Tubgcp3P58854 Wdr66-202ENSMUST00000121964 4873 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
Tubgcp3P58854 Igf2-204ENSMUST00000105936 3970 ntAPPRIS P1 TSL 2 BASIC12.99□□□□□ -0.33
Tubgcp3P58854 Gm26841-201ENSMUST00000180725 1787 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Tubgcp3P58854 Sgk3-202ENSMUST00000166384 3706 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Tubgcp3P58854 Rfx7-205ENSMUST00000184015 1554 ntTSL 5 BASIC12.98□□□□□ -0.33
Tubgcp3P58854 Sdccag8-202ENSMUST00000056773 1551 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Tubgcp3P58854 Wscd1-201ENSMUST00000021168 2757 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Tubgcp3P58854 Dnajb4-201ENSMUST00000029669 1497 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
Tubgcp3P58854 Pcnt-202ENSMUST00000217838 9341 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Tubgcp3P58854 Slc30a3-206ENSMUST00000202740 1989 ntTSL 5 BASIC12.98□□□□□ -0.33
Tubgcp3P58854 Snrk-203ENSMUST00000120173 4758 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Tubgcp3P58854 Olfr649-202ENSMUST00000106859 1382 ntAPPRIS P1 TSL 3 BASIC12.98□□□□□ -0.33
Tubgcp3P58854 Myo15b-208ENSMUST00000222123 5154 ntTSL 5 BASIC12.98□□□□□ -0.33
Tubgcp3P58854 Ddx46-202ENSMUST00000172272 5676 ntAPPRIS P2 TSL 5 BASIC12.98□□□□□ -0.33
Tubgcp3P58854 Ddx46-201ENSMUST00000099479 5664 ntAPPRIS ALT2 TSL 5 BASIC12.98□□□□□ -0.33
Tubgcp3P58854 Luc7l2-207ENSMUST00000161227 2405 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 37.8 ms