Protein–RNA interactions for Protein: P58771

Tpm1, Tropomyosin alpha-1 chain, mousemouse

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tpm1P58771 Satb2-205ENSMUST00000177424 4694 ntTSL 5 BASIC14.21□□□□□ -0.14
Tpm1P58771 Tnn-202ENSMUST00000131919 3987 ntTSL 5 BASIC14.21□□□□□ -0.14
Tpm1P58771 Zcchc11-202ENSMUST00000097925 5865 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.14
Tpm1P58771 Gm21038-201ENSMUST00000222205 1383 ntBASIC14.21□□□□□ -0.14
Tpm1P58771 Anxa8-201ENSMUST00000022519 1880 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Tpm1P58771 Cisd2-201ENSMUST00000029815 3361 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Tpm1P58771 Fndc3b-201ENSMUST00000046157 6875 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Tpm1P58771 Fitm2-201ENSMUST00000109418 3967 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Tpm1P58771 Trpv4-204ENSMUST00000112222 2475 ntTSL 5 BASIC14.2□□□□□ -0.14
Tpm1P58771 Mip-201ENSMUST00000026455 2144 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Tpm1P58771 Kcnd3-201ENSMUST00000079169 2102 ntAPPRIS P4 TSL 1 (best) BASIC14.2□□□□□ -0.14
Tpm1P58771 Dnaja2-201ENSMUST00000034138 2919 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Tpm1P58771 St6galnac6-201ENSMUST00000072111 2277 ntAPPRIS P3 TSL 5 BASIC14.2□□□□□ -0.14
Tpm1P58771 Nrf1-209ENSMUST00000115209 2406 ntTSL 5 BASIC14.2□□□□□ -0.14
Tpm1P58771 Hdac10-201ENSMUST00000082197 2412 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Tpm1P58771 Epha5-206ENSMUST00000113406 4606 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
Tpm1P58771 Pla2g2e-202ENSMUST00000105803 381 ntTSL 5 BASIC14.2□□□□□ -0.14
Tpm1P58771 Gm6447-201ENSMUST00000118905 835 ntBASIC14.2□□□□□ -0.14
Tpm1P58771 1700121C08Rik-201ENSMUST00000137546 677 ntTSL 3 BASIC14.2□□□□□ -0.14
Tpm1P58771 Tbx3os1-203ENSMUST00000140101 490 ntTSL 3 BASIC14.2□□□□□ -0.14
Tpm1P58771 1700029H14Rik-204ENSMUST00000151400 1216 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
Tpm1P58771 Arf5-202ENSMUST00000169841 768 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
Tpm1P58771 Esd-207ENSMUST00000176957 1117 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Tpm1P58771 Gm15294-202ENSMUST00000182079 366 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
Tpm1P58771 AC135669.1-202ENSMUST00000216742 540 ntBASIC14.2□□□□□ -0.14
Tpm1P58771 AC155258.1-201ENSMUST00000219303 253 ntBASIC14.2□□□□□ -0.14
Tpm1P58771 Rgs10-201ENSMUST00000033133 880 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Tpm1P58771 Tex12-201ENSMUST00000034568 895 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Tpm1P58771 Gm20445-201ENSMUST00000061905 565 ntBASIC14.2□□□□□ -0.14
Tpm1P58771 Lnx1-209ENSMUST00000153543 2208 ntTSL 5 BASIC14.2□□□□□ -0.14
Tpm1P58771 Pml-211ENSMUST00000153820 2652 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Tpm1P58771 Gpr176-201ENSMUST00000039160 3899 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Tpm1P58771 AC164426.2-201ENSMUST00000225993 2492 ntBASIC14.2□□□□□ -0.14
Tpm1P58771 Rac1-201ENSMUST00000080537 4159 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Tpm1P58771 2010315B03Rik-202ENSMUST00000177714 2623 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Tpm1P58771 Grm5-201ENSMUST00000107263 3516 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
Tpm1P58771 Adck2-204ENSMUST00000140364 3542 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Tpm1P58771 Cxadr-202ENSMUST00000114229 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Tpm1P58771 Gm16793-201ENSMUST00000181322 1680 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Tpm1P58771 Terb2-201ENSMUST00000028661 2115 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Tpm1P58771 Trpc2-201ENSMUST00000124189 2874 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Tpm1P58771 Rims4-201ENSMUST00000044734 4962 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Tpm1P58771 Iqsec2-201ENSMUST00000096275 5252 ntAPPRIS P3 TSL 2 BASIC14.2□□□□□ -0.14
Tpm1P58771 Mroh1-201ENSMUST00000092595 5111 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Tpm1P58771 Arhgap25-202ENSMUST00000101197 2493 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Tpm1P58771 Sema4f-201ENSMUST00000000641 4086 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Tpm1P58771 Hdac5-202ENSMUST00000107150 3759 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Tpm1P58771 Chd5-201ENSMUST00000005175 9122 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
Tpm1P58771 Jmjd1c-211ENSMUST00000174408 8377 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
Tpm1P58771 Jmjd1c-201ENSMUST00000051446 8382 ntAPPRIS P4 TSL 5 BASIC14.19□□□□□ -0.14
Tpm1P58771 Gm38187-201ENSMUST00000195609 4709 ntBASIC14.19□□□□□ -0.14
Tpm1P58771 Umod-206ENSMUST00000209095 2571 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Tpm1P58771 Tmem25-201ENSMUST00000002100 2448 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Tpm1P58771 Dnajc14-207ENSMUST00000219508 2298 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Tpm1P58771 Fgf18-202ENSMUST00000109363 991 ntTSL 3 BASIC14.19□□□□□ -0.14
Tpm1P58771 Trmt1-203ENSMUST00000109767 2138 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
Tpm1P58771 Gm13223-201ENSMUST00000118609 747 ntBASIC14.19□□□□□ -0.14
Tpm1P58771 Gm15376-201ENSMUST00000122258 783 ntBASIC14.19□□□□□ -0.14
Tpm1P58771 Sec22b-203ENSMUST00000130620 640 ntTSL 2 BASIC14.19□□□□□ -0.14
Tpm1P58771 Tm7sf2-209ENSMUST00000161528 732 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Tpm1P58771 Gm20753-201ENSMUST00000190105 545 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Tpm1P58771 Fcrl1-204ENSMUST00000191666 925 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Tpm1P58771 Gm4610-201ENSMUST00000198222 905 ntTSL 5 BASIC14.19□□□□□ -0.14
Tpm1P58771 Ube2a-205ENSMUST00000201068 1298 ntTSL 5 BASIC14.19□□□□□ -0.14
Tpm1P58771 AC156504.2-201ENSMUST00000213800 711 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Tpm1P58771 AC173210.1-201ENSMUST00000222341 1131 ntBASIC14.19□□□□□ -0.14
Tpm1P58771 Olfr1412-201ENSMUST00000062964 966 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
Tpm1P58771 Mlkl-202ENSMUST00000120432 1976 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
Tpm1P58771 Cyp2b10-201ENSMUST00000005477 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Tpm1P58771 Ttc34-201ENSMUST00000050220 3200 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Tpm1P58771 BC055324-202ENSMUST00000097493 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Tpm1P58771 Trpv3-201ENSMUST00000049676 5835 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Tpm1P58771 Kpna7-203ENSMUST00000116454 1500 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
Tpm1P58771 Irf1-203ENSMUST00000108922 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Tpm1P58771 Gm16070-203ENSMUST00000155588 1902 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Tpm1P58771 Nol4-204ENSMUST00000097651 4549 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Tpm1P58771 Pik3cd-203ENSMUST00000105689 3132 ntAPPRIS ALT1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Tpm1P58771 Pcdhgc4-201ENSMUST00000066140 5024 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Tpm1P58771 Lcor-201ENSMUST00000067795 4810 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Tpm1P58771 Stat5b-202ENSMUST00000107358 5213 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Tpm1P58771 Whamm-203ENSMUST00000209044 1879 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Tpm1P58771 Ap5b1-201ENSMUST00000096318 3092 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Tpm1P58771 Rspry1-201ENSMUST00000060389 3852 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Tpm1P58771 Banp-204ENSMUST00000170857 5444 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Tpm1P58771 Ctbp2-209ENSMUST00000166439 1997 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Tpm1P58771 Adcyap1r1-201ENSMUST00000070736 3695 ntAPPRIS P4 TSL 1 (best) BASIC14.18□□□□□ -0.14
Tpm1P58771 Xpot-203ENSMUST00000218004 6005 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
Tpm1P58771 Nars2-201ENSMUST00000044466 3778 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Tpm1P58771 Sephs1-201ENSMUST00000027973 5319 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Tpm1P58771 Armt1-203ENSMUST00000118544 5044 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Tpm1P58771 Selenoh-202ENSMUST00000102647 654 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Tpm1P58771 Rab4a-201ENSMUST00000117702 1080 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Tpm1P58771 Gm26935-201ENSMUST00000182686 519 ntTSL 5 BASIC14.18□□□□□ -0.14
Tpm1P58771 4930593C16Rik-202ENSMUST00000214011 714 ntTSL 5 BASIC14.18□□□□□ -0.14
Tpm1P58771 AC132104.2-201ENSMUST00000215011 266 ntBASIC14.18□□□□□ -0.14
Tpm1P58771 Nek4-204ENSMUST00000226833 1252 ntAPPRIS ALT2 BASIC14.18□□□□□ -0.14
Tpm1P58771 Brk1-201ENSMUST00000035725 1095 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Tpm1P58771 2900055J20Rik-201ENSMUST00000096572 723 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
Tpm1P58771 Asph-207ENSMUST00000108333 2652 ntTSL 5 BASIC14.18□□□□□ -0.14
Tpm1P58771 Gm44094-201ENSMUST00000204703 2030 ntBASIC14.18□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 31.7 ms