Protein–RNA interactions for Protein: P56183

Rrp1, Ribosomal RNA processing protein 1 homolog A, mousemouse

Known RBP Predictions only

Length 494 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rrp1P56183 Csrnp3-207ENSMUST00000145598 2566 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Rrp1P56183 Xylb-201ENSMUST00000039610 3383 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Rrp1P56183 Mkl1-209ENSMUST00000149582 4366 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Rrp1P56183 Fam214b-203ENSMUST00000107957 3234 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
Rrp1P56183 Apol7e-201ENSMUST00000096358 2227 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Rrp1P56183 Arhgap11a-203ENSMUST00000110948 4878 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Rrp1P56183 Dnaic2-201ENSMUST00000069325 2874 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
Rrp1P56183 Foxred1-202ENSMUST00000127996 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Rrp1P56183 Slc44a4-201ENSMUST00000007249 2261 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Rrp1P56183 Tm9sf2-201ENSMUST00000026624 3107 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Rrp1P56183 Ppara-203ENSMUST00000109423 2519 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Rrp1P56183 Gm13394-201ENSMUST00000121658 1000 ntBASIC14.34□□□□□ -0.11
Rrp1P56183 Gm14760-201ENSMUST00000121831 999 ntBASIC14.34□□□□□ -0.11
Rrp1P56183 Ly6g6e-203ENSMUST00000172678 750 ntAPPRIS P2 TSL 3 BASIC14.34□□□□□ -0.11
Rrp1P56183 H2-Pa-201ENSMUST00000182803 626 ntBASIC14.34□□□□□ -0.11
Rrp1P56183 H2-Oa-201ENSMUST00000025192 1088 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Rrp1P56183 Mt1-201ENSMUST00000034215 549 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Rrp1P56183 Mrps21-201ENSMUST00000067298 488 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Rrp1P56183 Gm13199-201ENSMUST00000071016 747 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Rrp1P56183 Gm8973-201ENSMUST00000079818 315 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
Rrp1P56183 Gm10322-201ENSMUST00000095646 336 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
Rrp1P56183 Sox11-201ENSMUST00000079063 8311 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
Rrp1P56183 Cyb561d1-201ENSMUST00000065664 4058 ntAPPRIS ALT1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Rrp1P56183 Klhl8-202ENSMUST00000112811 2577 ntTSL 5 BASIC14.34□□□□□ -0.11
Rrp1P56183 Rspo2-203ENSMUST00000226810 3091 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
Rrp1P56183 Ccdc94-201ENSMUST00000086869 1311 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Rrp1P56183 Thrb-203ENSMUST00000091471 1758 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Rrp1P56183 March7-203ENSMUST00000102748 3594 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Rrp1P56183 Rftn2-202ENSMUST00000114428 2012 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Rrp1P56183 Ccpg1-208ENSMUST00000150826 2939 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Rrp1P56183 Chrnd-201ENSMUST00000073252 2925 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Rrp1P56183 St6gal1-201ENSMUST00000023601 4506 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Rrp1P56183 Mat2b-202ENSMUST00000101347 2053 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Rrp1P56183 Fbxl12-201ENSMUST00000086458 2056 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Rrp1P56183 Fbxl12-202ENSMUST00000086459 2086 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Rrp1P56183 AI661453-202ENSMUST00000150819 4866 ntAPPRIS P2 TSL 5 BASIC14.33□□□□□ -0.11
Rrp1P56183 Tbc1d14-205ENSMUST00000136189 4436 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
Rrp1P56183 Fxr1-204ENSMUST00000197694 2129 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.11
Rrp1P56183 4930423D22Rik-201ENSMUST00000221909 1674 ntBASIC14.33□□□□□ -0.11
Rrp1P56183 Plxdc1-201ENSMUST00000017561 2881 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Rrp1P56183 P4ha1-203ENSMUST00000105466 2918 ntAPPRIS ALT1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Rrp1P56183 Spon1-201ENSMUST00000046687 6161 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Rrp1P56183 Shtn1-202ENSMUST00000163821 3767 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Rrp1P56183 Egr1-202ENSMUST00000165033 3036 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
Rrp1P56183 Fam198a-203ENSMUST00000214536 2789 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Rrp1P56183 Gm11618-201ENSMUST00000117946 267 ntBASIC14.33□□□□□ -0.12
Rrp1P56183 St6galnac6-209ENSMUST00000131229 1013 ntTSL 2 BASIC14.33□□□□□ -0.12
Rrp1P56183 Rsf1os2-203ENSMUST00000155074 998 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Rrp1P56183 Gm7446-201ENSMUST00000221035 1240 ntBASIC14.33□□□□□ -0.12
Rrp1P56183 AC154687.2-201ENSMUST00000223853 640 ntBASIC14.33□□□□□ -0.12
Rrp1P56183 AC140375.2-201ENSMUST00000225283 584 ntBASIC14.33□□□□□ -0.12
Rrp1P56183 2610528J11Rik-201ENSMUST00000030261 958 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Rrp1P56183 Phgr1-201ENSMUST00000061360 538 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
Rrp1P56183 Fthl17c-201ENSMUST00000075792 850 ntAPPRIS P1 BASIC14.33□□□□□ -0.12
Rrp1P56183 Apbb2-215ENSMUST00000162349 3362 ntAPPRIS P3 TSL 5 BASIC14.33□□□□□ -0.12
Rrp1P56183 Apbb2-201ENSMUST00000087256 3362 ntAPPRIS ALT1 TSL 5 BASIC14.33□□□□□ -0.12
Rrp1P56183 Stx11-201ENSMUST00000042861 4173 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Rrp1P56183 Gm5936-201ENSMUST00000114116 2857 ntAPPRIS P1 TSL 3 BASIC14.33□□□□□ -0.12
Rrp1P56183 Gm5640-201ENSMUST00000114119 2861 ntAPPRIS P1 TSL 3 BASIC14.33□□□□□ -0.12
Rrp1P56183 DXBay18-201ENSMUST00000080324 2862 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Rrp1P56183 Gm14685-201ENSMUST00000088459 2864 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Rrp1P56183 Pir-201ENSMUST00000033749 1599 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Rrp1P56183 Gck-203ENSMUST00000109823 2361 ntTSL 5 BASIC14.33□□□□□ -0.12
Rrp1P56183 Olfr283-202ENSMUST00000215830 2392 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
Rrp1P56183 Ttll12-201ENSMUST00000016901 3220 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Rrp1P56183 Rsph3b-201ENSMUST00000024572 1614 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Rrp1P56183 Rasgrp4-214ENSMUST00000205027 2717 ntTSL 5 BASIC14.33□□□□□ -0.12
Rrp1P56183 Gm9530-201ENSMUST00000181160 3281 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Rrp1P56183 Epb41l2-207ENSMUST00000218903 4115 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Rrp1P56183 Rabggtb-201ENSMUST00000089950 1381 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
Rrp1P56183 Rasa3-201ENSMUST00000117551 4404 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Rrp1P56183 Slc22a16-201ENSMUST00000019978 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Rrp1P56183 Slc9b1-201ENSMUST00000078568 2248 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Rrp1P56183 Usp19-210ENSMUST00000193678 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Rrp1P56183 Brwd1-201ENSMUST00000023631 8209 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Rrp1P56183 Cep41-203ENSMUST00000115131 2256 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
Rrp1P56183 Txndc5-203ENSMUST00000160653 2586 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Rrp1P56183 Etf1-201ENSMUST00000025218 3709 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Rrp1P56183 Tekt3-201ENSMUST00000035732 1748 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Rrp1P56183 Lig1-210ENSMUST00000165964 3166 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
Rrp1P56183 Hnrnpr-201ENSMUST00000084219 2647 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Rrp1P56183 Bcar3-201ENSMUST00000029766 3311 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Rrp1P56183 Armcx2-203ENSMUST00000119010 3007 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Rrp1P56183 Mbtd1-201ENSMUST00000063645 2138 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Rrp1P56183 Fitm2-201ENSMUST00000109418 3967 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Rrp1P56183 Qrich2-201ENSMUST00000093909 2156 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Rrp1P56183 Mettl27-201ENSMUST00000047196 2808 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Rrp1P56183 Chchd3-201ENSMUST00000066379 1550 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Rrp1P56183 Zic4-204ENSMUST00000172646 2535 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
Rrp1P56183 Faap20-202ENSMUST00000105627 710 ntAPPRIS ALT2 TSL 2 BASIC14.32□□□□□ -0.12
Rrp1P56183 Ppcs-202ENSMUST00000106316 954 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Rrp1P56183 Rgs19-204ENSMUST00000108772 779 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Rrp1P56183 Gm14928-201ENSMUST00000120198 477 ntBASIC14.32□□□□□ -0.12
Rrp1P56183 Gm11574-201ENSMUST00000139752 946 ntTSL 5 BASIC14.32□□□□□ -0.12
Rrp1P56183 Gm43416-201ENSMUST00000201916 1015 ntBASIC14.32□□□□□ -0.12
Rrp1P56183 Camsap3-203ENSMUST00000207077 3832 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Rrp1P56183 Gm11563-201ENSMUST00000092695 1012 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
Rrp1P56183 H2afv-201ENSMUST00000093346 519 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Rrp1P56183 Bcl9l-201ENSMUST00000074989 5339 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Rrp1P56183 Met-202ENSMUST00000115442 4663 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 53.2 ms