Protein–RNA interactions for Protein: P55271

Cdkn2b, Cyclin-dependent kinase 4 inhibitor B, mousemouse

Predictions only

Length 130 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdkn2bP55271 Ppp1r12b-201ENSMUST00000045665 8840 ntAPPRIS ALT2 TSL 5 BASIC12.18□□□□□ -0.46
Cdkn2bP55271 Acta1-201ENSMUST00000034453 1446 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Cdkn2bP55271 Nrg1-206ENSMUST00000208205 2645 ntAPPRIS ALT2 TSL 5 BASIC12.18□□□□□ -0.46
Cdkn2bP55271 Gm1995-201ENSMUST00000220838 2602 ntBASIC12.18□□□□□ -0.46
Cdkn2bP55271 Capn2-201ENSMUST00000068505 3225 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Cdkn2bP55271 Dtx1-201ENSMUST00000031607 4035 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Cdkn2bP55271 Gm44831-201ENSMUST00000208469 2989 ntBASIC12.18□□□□□ -0.46
Cdkn2bP55271 Oxnad1-201ENSMUST00000022462 2376 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Cdkn2bP55271 Aamp-202ENSMUST00000178235 1756 ntAPPRIS ALT1 TSL 5 BASIC12.18□□□□□ -0.46
Cdkn2bP55271 Bcl9l-201ENSMUST00000074989 5339 ntAPPRIS P2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Cdkn2bP55271 Zbtb25-205ENSMUST00000176509 1591 ntTSL 2 BASIC12.18□□□□□ -0.46
Cdkn2bP55271 Krt17-201ENSMUST00000080893 1551 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Cdkn2bP55271 Olfr649-202ENSMUST00000106859 1382 ntAPPRIS P1 TSL 3 BASIC12.18□□□□□ -0.46
Cdkn2bP55271 Rwdd2a-201ENSMUST00000034988 1355 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Cdkn2bP55271 Lhx6-201ENSMUST00000112960 3345 ntAPPRIS P1 TSL 2 BASIC12.17□□□□□ -0.46
Cdkn2bP55271 Tmppe-201ENSMUST00000111820 2921 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Cdkn2bP55271 Smarcd2-203ENSMUST00000106843 2548 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Cdkn2bP55271 Ebp-201ENSMUST00000033509 1743 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Cdkn2bP55271 Polm-202ENSMUST00000109837 2697 ntTSL 5 BASIC12.17□□□□□ -0.46
Cdkn2bP55271 Cngb1-201ENSMUST00000093268 1512 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Cdkn2bP55271 Pla2g2f-201ENSMUST00000030526 2465 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Cdkn2bP55271 Hnrnpf-209ENSMUST00000180020 2280 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Cdkn2bP55271 Sh2d7-202ENSMUST00000118413 1316 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Cdkn2bP55271 Zfp536-203ENSMUST00000176114 4341 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Cdkn2bP55271 Picalm-213ENSMUST00000208742 3361 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Cdkn2bP55271 Tspan32-202ENSMUST00000075172 1876 ntAPPRIS P3 TSL 1 (best) BASIC12.17□□□□□ -0.46
Cdkn2bP55271 Mcph1-201ENSMUST00000039412 4662 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Cdkn2bP55271 Ubtf-203ENSMUST00000107115 3199 ntAPPRIS ALT2 TSL 5 BASIC12.17□□□□□ -0.46
Cdkn2bP55271 Ptprk-202ENSMUST00000218276 4754 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Cdkn2bP55271 Mapkapk5-205ENSMUST00000111786 975 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Cdkn2bP55271 Gm14057-201ENSMUST00000120631 482 ntBASIC12.17□□□□□ -0.46
Cdkn2bP55271 Gm12984-201ENSMUST00000145711 273 ntTSL 5 BASIC12.17□□□□□ -0.46
Cdkn2bP55271 Atp5j2-202ENSMUST00000161741 955 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Cdkn2bP55271 Gm22121-201ENSMUST00000175148 54 ntBASIC12.17□□□□□ -0.46
Cdkn2bP55271 Dnajb6-210ENSMUST00000196528 1018 ntTSL 5 BASIC12.17□□□□□ -0.46
Cdkn2bP55271 Gm42921-201ENSMUST00000196670 655 ntTSL 2 BASIC12.17□□□□□ -0.46
Cdkn2bP55271 Gm44772-201ENSMUST00000207623 1191 ntBASIC12.17□□□□□ -0.46
Cdkn2bP55271 Gm34549-203ENSMUST00000208300 896 ntTSL 5 BASIC12.17□□□□□ -0.46
Cdkn2bP55271 Gm8598-201ENSMUST00000221184 836 ntBASIC12.17□□□□□ -0.46
Cdkn2bP55271 Ssc4d-201ENSMUST00000054895 1191 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Cdkn2bP55271 Mapt-204ENSMUST00000106992 5253 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Cdkn2bP55271 Mafk-202ENSMUST00000110836 3097 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
Cdkn2bP55271 Prkce-202ENSMUST00000097275 6254 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Cdkn2bP55271 Mroh5-202ENSMUST00000110021 2145 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Cdkn2bP55271 Actb-201ENSMUST00000100497 1920 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Cdkn2bP55271 Ppfia4-205ENSMUST00000189361 5238 ntAPPRIS ALT2 TSL 5 BASIC12.17□□□□□ -0.46
Cdkn2bP55271 Hdac10-201ENSMUST00000082197 2412 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Cdkn2bP55271 Ankzf1-208ENSMUST00000152233 2739 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Cdkn2bP55271 Zfp641-201ENSMUST00000023722 4212 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Cdkn2bP55271 Dab2ip-204ENSMUST00000112983 6051 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Cdkn2bP55271 Fnbp1-203ENSMUST00000100207 1680 ntTSL 5 BASIC12.16□□□□□ -0.46
Cdkn2bP55271 Adi1-201ENSMUST00000020957 1652 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Cdkn2bP55271 Serpinf2-202ENSMUST00000108437 2179 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Cdkn2bP55271 Psap-201ENSMUST00000004316 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Cdkn2bP55271 Krt40-201ENSMUST00000074253 1320 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Cdkn2bP55271 Bop1-201ENSMUST00000023217 2476 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Cdkn2bP55271 Tmcc3-204ENSMUST00000121471 2614 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Cdkn2bP55271 1110046J04Rik-202ENSMUST00000180906 2776 ntBASIC12.16□□□□□ -0.46
Cdkn2bP55271 Cdc37l1-208ENSMUST00000225310 4079 ntAPPRIS ALT2 BASIC12.16□□□□□ -0.46
Cdkn2bP55271 6330537M06Rik-201ENSMUST00000212384 1642 ntBASIC12.16□□□□□ -0.46
Cdkn2bP55271 Chst15-201ENSMUST00000077472 5041 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Cdkn2bP55271 Lig1-201ENSMUST00000098814 3091 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
Cdkn2bP55271 Oprd1-201ENSMUST00000056336 4021 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Cdkn2bP55271 Cdip1-203ENSMUST00000118703 2554 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Cdkn2bP55271 Plekhg2-203ENSMUST00000121085 4649 ntAPPRIS ALT2 TSL 2 BASIC12.16□□□□□ -0.46
Cdkn2bP55271 Cpsf4l-203ENSMUST00000106617 1123 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Cdkn2bP55271 Gfpt1-202ENSMUST00000113655 1255 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Cdkn2bP55271 Il11-202ENSMUST00000163481 990 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Cdkn2bP55271 2010015M23Rik-201ENSMUST00000181900 1199 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Cdkn2bP55271 Neurl3-202ENSMUST00000188666 1206 ntTSL 5 BASIC12.16□□□□□ -0.46
Cdkn2bP55271 Fam168a-206ENSMUST00000208013 1129 ntTSL 5 BASIC12.16□□□□□ -0.46
Cdkn2bP55271 Gm4129-201ENSMUST00000220083 625 ntTSL 3 BASIC12.16□□□□□ -0.46
Cdkn2bP55271 Cdk7-205ENSMUST00000225990 1159 ntBASIC12.16□□□□□ -0.46
Cdkn2bP55271 Hilpda-201ENSMUST00000054445 982 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Cdkn2bP55271 Ifitm10-202ENSMUST00000084412 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Cdkn2bP55271 Stx18-203ENSMUST00000114126 3002 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Cdkn2bP55271 Gm38569-201ENSMUST00000205476 2228 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Cdkn2bP55271 Irf6-201ENSMUST00000076521 4113 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Cdkn2bP55271 Zscan10-202ENSMUST00000115509 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Cdkn2bP55271 Acadsb-201ENSMUST00000015829 6081 ntAPPRIS P2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Cdkn2bP55271 Abcc6-201ENSMUST00000002850 4974 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Cdkn2bP55271 Sipa1l2-204ENSMUST00000212987 6690 ntAPPRIS P2 TSL 5 BASIC12.16□□□□□ -0.46
Cdkn2bP55271 Spock1-202ENSMUST00000185502 4614 ntAPPRIS ALT1 TSL 5 BASIC12.16□□□□□ -0.46
Cdkn2bP55271 Ajuba-201ENSMUST00000054487 3397 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Cdkn2bP55271 Pnoc-202ENSMUST00000224594 1388 ntAPPRIS ALT2 BASIC12.16□□□□□ -0.46
Cdkn2bP55271 Nyap1-202ENSMUST00000118326 4565 ntAPPRIS P3 TSL 1 (best) BASIC12.16□□□□□ -0.46
Cdkn2bP55271 Igf1-203ENSMUST00000105300 1673 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Cdkn2bP55271 Rnh1-202ENSMUST00000167493 1656 ntAPPRIS P3 TSL 1 (best) BASIC12.16□□□□□ -0.46
Cdkn2bP55271 Rnh1-204ENSMUST00000210314 1658 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Cdkn2bP55271 Dmbx1-201ENSMUST00000064806 5799 ntAPPRIS P2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Cdkn2bP55271 Dab2ip-205ENSMUST00000112986 5580 ntAPPRIS ALT2 TSL 5 BASIC12.16□□□□□ -0.46
Cdkn2bP55271 Mid1-215ENSMUST00000171433 2546 ntAPPRIS P1 TSL 5 BASIC12.15□□□□□ -0.46
Cdkn2bP55271 Epb41l5-201ENSMUST00000027632 2523 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Cdkn2bP55271 Wasf2-202ENSMUST00000105912 2236 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Cdkn2bP55271 4931406C07Rik-208ENSMUST00000216955 1750 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Cdkn2bP55271 Nmral1-203ENSMUST00000115851 1306 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Cdkn2bP55271 Lef1-204ENSMUST00000106341 3357 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Cdkn2bP55271 Lef1-202ENSMUST00000066849 3398 ntAPPRIS ALT1 TSL 5 BASIC12.15□□□□□ -0.46
Cdkn2bP55271 4931406C07Rik-203ENSMUST00000180339 2756 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Cdkn2bP55271 Ube2a-201ENSMUST00000016452 1732 ntAPPRIS P3 TSL 1 (best) BASIC12.15□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 56.8 ms