Protein–RNA interactions for Protein: P54846

Nrl, Neural retina-specific leucine zipper protein, mousemouse

Predictions only

Length 237 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NrlP54846 Gm23363-201ENSMUST00000175024 79 ntBASIC13.56□□□□□ -0.24
NrlP54846 Mir6979-201ENSMUST00000183927 56 ntBASIC13.56□□□□□ -0.24
NrlP54846 Gm3096-201ENSMUST00000185770 364 ntBASIC13.56□□□□□ -0.24
NrlP54846 2610016A17Rik-202ENSMUST00000186768 689 ntBASIC13.56□□□□□ -0.24
NrlP54846 Gm38092-201ENSMUST00000195600 653 ntBASIC13.56□□□□□ -0.24
NrlP54846 AC112680.3-201ENSMUST00000215297 488 ntTSL 3 BASIC13.56□□□□□ -0.24
NrlP54846 Ssc4d-201ENSMUST00000054895 1191 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
NrlP54846 BC003331-205ENSMUST00000111913 3273 ntAPPRIS P3 TSL 5 BASIC13.56□□□□□ -0.24
NrlP54846 Ppp3cb-205ENSMUST00000161445 3298 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
NrlP54846 4933417C20Rik-201ENSMUST00000193962 1874 ntBASIC13.56□□□□□ -0.24
NrlP54846 Adh6a-202ENSMUST00000106247 1341 ntAPPRIS P2 TSL 1 (best) BASIC13.56□□□□□ -0.24
NrlP54846 Tspan13-201ENSMUST00000020896 1932 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
NrlP54846 Pde4d-220ENSMUST00000177907 2244 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
NrlP54846 Evc2-201ENSMUST00000056365 4091 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
NrlP54846 Ddx23-201ENSMUST00000003450 3187 ntAPPRIS P1 TSL 5 BASIC13.56□□□□□ -0.24
NrlP54846 Zfp422-202ENSMUST00000079749 3187 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
NrlP54846 Gm16168-201ENSMUST00000161091 1359 ntTSL 3 BASIC13.56□□□□□ -0.24
NrlP54846 Plekha7-203ENSMUST00000181998 5149 ntAPPRIS P2 TSL 1 (best) BASIC13.56□□□□□ -0.24
NrlP54846 Mtm1-201ENSMUST00000025391 3286 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
NrlP54846 Zfp740-201ENSMUST00000118729 4241 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
NrlP54846 Plcd3-201ENSMUST00000103077 3023 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
NrlP54846 BB123696-201ENSMUST00000222580 2056 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
NrlP54846 Samd11-202ENSMUST00000217934 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
NrlP54846 Dysf-201ENSMUST00000081904 6660 ntAPPRIS P4 TSL 1 (best) BASIC13.55□□□□□ -0.24
NrlP54846 Anks1b-231ENSMUST00000183136 2786 ntTSL 5 BASIC13.55□□□□□ -0.24
NrlP54846 Fbxo48-201ENSMUST00000061327 2117 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
NrlP54846 Dmac2-201ENSMUST00000077338 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
NrlP54846 Gm21982-201ENSMUST00000146232 3821 ntTSL 2 BASIC13.55□□□□□ -0.24
NrlP54846 Flt4-201ENSMUST00000020617 6255 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
NrlP54846 Gm45332-201ENSMUST00000210508 1949 ntTSL 5 BASIC13.55□□□□□ -0.24
NrlP54846 Alg2-201ENSMUST00000044148 3021 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
NrlP54846 Shisa3-201ENSMUST00000087241 3760 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
NrlP54846 Myl4-202ENSMUST00000106956 900 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
NrlP54846 Apoc1-202ENSMUST00000108451 532 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
NrlP54846 Gm14109-201ENSMUST00000118814 309 ntBASIC13.55□□□□□ -0.24
NrlP54846 Rpl13-ps1-201ENSMUST00000121801 668 ntBASIC13.55□□□□□ -0.24
NrlP54846 Tex22-201ENSMUST00000012355 1267 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
NrlP54846 Has2os-201ENSMUST00000125401 485 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
NrlP54846 D630024D03Rik-201ENSMUST00000126265 720 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
NrlP54846 B9d1os-201ENSMUST00000137010 674 ntBASIC13.55□□□□□ -0.24
NrlP54846 C1qtnf2-203ENSMUST00000173002 1147 ntAPPRIS ALT2 TSL 5 BASIC13.55□□□□□ -0.24
NrlP54846 Gm20470-201ENSMUST00000174654 331 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
NrlP54846 Rhoc-204ENSMUST00000176347 583 ntTSL 5 BASIC13.55□□□□□ -0.24
NrlP54846 Gm13381-202ENSMUST00000177012 640 ntTSL 5 BASIC13.55□□□□□ -0.24
NrlP54846 Myl4-201ENSMUST00000018800 879 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
NrlP54846 Gm8885-201ENSMUST00000189382 598 ntBASIC13.55□□□□□ -0.24
NrlP54846 Gm29856-201ENSMUST00000191905 1257 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
NrlP54846 Gm33175-201ENSMUST00000211562 461 ntTSL 5 BASIC13.55□□□□□ -0.24
NrlP54846 Mt2-202ENSMUST00000212806 388 ntTSL 2 BASIC13.55□□□□□ -0.24
NrlP54846 4930578M07Rik-202ENSMUST00000212946 552 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
NrlP54846 Abhd11os-203ENSMUST00000222613 363 ntBASIC13.55□□□□□ -0.24
NrlP54846 Treml1-205ENSMUST00000225849 974 ntAPPRIS ALT2 BASIC13.55□□□□□ -0.24
NrlP54846 H2-Oa-201ENSMUST00000025192 1088 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
NrlP54846 Riiad1-201ENSMUST00000029785 630 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
NrlP54846 Ntm-203ENSMUST00000115237 2039 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
NrlP54846 Aste1-201ENSMUST00000035181 2755 ntAPPRIS P3 TSL 1 (best) BASIC13.55□□□□□ -0.24
NrlP54846 Rgs17-203ENSMUST00000117676 1651 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
NrlP54846 Paox-201ENSMUST00000026537 4655 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
NrlP54846 Slc22a15-201ENSMUST00000106928 6573 ntAPPRIS P1 TSL 5 BASIC13.55□□□□□ -0.24
NrlP54846 Mirg-202ENSMUST00000181543 1300 ntTSL 5 BASIC13.55□□□□□ -0.24
NrlP54846 Cct6a-202ENSMUST00000201414 2454 ntTSL 5 BASIC13.55□□□□□ -0.24
NrlP54846 Gm13003-201ENSMUST00000151040 2904 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
NrlP54846 Rnf40-202ENSMUST00000205694 5279 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
NrlP54846 Tmem132e-202ENSMUST00000092852 4105 ntAPPRIS ALT2 TSL 2 BASIC13.55□□□□□ -0.24
NrlP54846 Gdf9-201ENSMUST00000018382 1793 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
NrlP54846 Glrx3-203ENSMUST00000211496 3440 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
NrlP54846 Ptgdr2-201ENSMUST00000037261 2644 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
NrlP54846 Gm5846-201ENSMUST00000193146 1414 ntBASIC13.55□□□□□ -0.24
NrlP54846 Lingo1-202ENSMUST00000114247 2287 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
NrlP54846 Tnpo2-201ENSMUST00000093360 4863 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
NrlP54846 Arhgef37-201ENSMUST00000171629 3234 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
NrlP54846 Mtch2-211ENSMUST00000150232 2377 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
NrlP54846 Gm29530-201ENSMUST00000187556 1956 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
NrlP54846 Zbp1-201ENSMUST00000029018 1989 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
NrlP54846 Cd33-201ENSMUST00000004728 1962 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
NrlP54846 Fetub-201ENSMUST00000023587 1573 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
NrlP54846 Mcm8-201ENSMUST00000028831 3179 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
NrlP54846 Hlf-201ENSMUST00000004051 5642 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
NrlP54846 Hmox2-201ENSMUST00000004172 1730 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
NrlP54846 Gm10176-201ENSMUST00000159707 2264 ntBASIC13.54□□□□□ -0.24
NrlP54846 Park7-202ENSMUST00000105673 919 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
NrlP54846 Mymx-201ENSMUST00000113529 442 ntAPPRIS ALT2 TSL 2 BASIC13.54□□□□□ -0.24
NrlP54846 Gm8908-201ENSMUST00000121633 1024 ntBASIC13.54□□□□□ -0.24
NrlP54846 Cox6c-203ENSMUST00000153512 738 ntAPPRIS P1 TSL 2 BASIC13.54□□□□□ -0.24
NrlP54846 Gm22902-201ENSMUST00000158488 302 ntBASIC13.54□□□□□ -0.24
NrlP54846 S100a14-201ENSMUST00000164481 915 ntTSL 2 BASIC13.54□□□□□ -0.24
NrlP54846 1700125G22Rik-201ENSMUST00000181124 861 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
NrlP54846 Mir7221-201ENSMUST00000184009 72 ntBASIC13.54□□□□□ -0.24
NrlP54846 Gm42839-201ENSMUST00000198978 525 ntTSL 2 BASIC13.54□□□□□ -0.24
NrlP54846 Gm42800-201ENSMUST00000202494 733 ntTSL 5 BASIC13.54□□□□□ -0.24
NrlP54846 1700112L15Rik-201ENSMUST00000212067 510 ntBASIC13.54□□□□□ -0.24
NrlP54846 AC161537.1-201ENSMUST00000226199 1015 ntBASIC13.54□□□□□ -0.24
NrlP54846 Syngr4-201ENSMUST00000039049 967 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
NrlP54846 Tnnt3-201ENSMUST00000074187 1007 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
NrlP54846 Ormdl1-201ENSMUST00000027266 1910 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
NrlP54846 Rabggtb-201ENSMUST00000089950 1381 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
NrlP54846 Ralgds-202ENSMUST00000100241 3102 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
NrlP54846 Sox17-206ENSMUST00000192650 3242 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
NrlP54846 Tbc1d22a-201ENSMUST00000063414 3229 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
NrlP54846 Tmub1-203ENSMUST00000115036 1455 ntTSL 5 BASIC13.54□□□□□ -0.24
Retrieved 100 of 76,532 protein–RNA pairs in 43.6 ms