Protein–RNA interactions for Protein: P54823

Ddx6, Probable ATP-dependent RNA helicase DDX6, mousemouse

Known RBP Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx6P54823 Nkain3-201ENSMUST00000102998 3098 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Ddx6P54823 Depdc1b-201ENSMUST00000051594 2563 ntAPPRIS P2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Ddx6P54823 6030458C11Rik-202ENSMUST00000227299 3206 ntBASIC12.93□□□□□ -0.34
Ddx6P54823 Nfatc2-204ENSMUST00000109184 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Ddx6P54823 Pias3-202ENSMUST00000107076 2858 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Ddx6P54823 Gm45495-201ENSMUST00000200940 1700 ntBASIC12.93□□□□□ -0.34
Ddx6P54823 Acin1-202ENSMUST00000022794 2365 ntAPPRIS ALT2 TSL 5 BASIC12.93□□□□□ -0.34
Ddx6P54823 Efhc1-201ENSMUST00000038447 2146 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Ddx6P54823 Dnm2-201ENSMUST00000072362 3502 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Ddx6P54823 Rbm8a2-201ENSMUST00000104983 1338 ntAPPRIS P1 BASIC12.92□□□□□ -0.34
Ddx6P54823 Actg2-201ENSMUST00000075161 1333 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Ddx6P54823 Eno3-206ENSMUST00000170716 1461 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Ddx6P54823 Gm2694-202ENSMUST00000180806 1452 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Ddx6P54823 Tbc1d9b-201ENSMUST00000093138 4407 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
Ddx6P54823 Lypd6-201ENSMUST00000053208 3620 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Ddx6P54823 Cwc27-201ENSMUST00000022228 2071 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Ddx6P54823 Pex12-202ENSMUST00000108146 2389 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Ddx6P54823 Arpc1b-201ENSMUST00000085679 3105 ntAPPRIS P2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Ddx6P54823 Gm6890-201ENSMUST00000114117 776 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
Ddx6P54823 Mkl2-203ENSMUST00000115809 667 ntTSL 2 BASIC12.92□□□□□ -0.34
Ddx6P54823 Cspp1-202ENSMUST00000117415 1272 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Ddx6P54823 Wdr66-202ENSMUST00000121964 4873 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
Ddx6P54823 Platr29-201ENSMUST00000130022 830 ntTSL 5 BASIC12.92□□□□□ -0.34
Ddx6P54823 Gm6963-201ENSMUST00000147879 379 ntBASIC12.92□□□□□ -0.34
Ddx6P54823 Gm16339-201ENSMUST00000160954 929 ntTSL 5 BASIC12.92□□□□□ -0.34
Ddx6P54823 Gm8494-201ENSMUST00000178171 1233 ntBASIC12.92□□□□□ -0.34
Ddx6P54823 Gm28192-201ENSMUST00000189381 778 ntTSL 5 BASIC12.92□□□□□ -0.34
Ddx6P54823 Gm32999-201ENSMUST00000192693 562 ntBASIC12.92□□□□□ -0.34
Ddx6P54823 Gm42800-201ENSMUST00000202494 733 ntTSL 5 BASIC12.92□□□□□ -0.34
Ddx6P54823 Gm44262-201ENSMUST00000204969 372 ntBASIC12.92□□□□□ -0.34
Ddx6P54823 Acsm5-207ENSMUST00000207813 1084 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Ddx6P54823 1700112L15Rik-201ENSMUST00000212067 510 ntBASIC12.92□□□□□ -0.34
Ddx6P54823 Gzmn-202ENSMUST00000225535 989 ntBASIC12.92□□□□□ -0.34
Ddx6P54823 Gm8385-201ENSMUST00000058999 643 ntBASIC12.92□□□□□ -0.34
Ddx6P54823 Gabrg3-201ENSMUST00000068394 1724 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Ddx6P54823 Nmral1-201ENSMUST00000074970 1155 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Ddx6P54823 Smarca4-204ENSMUST00000174008 5405 ntAPPRIS ALT1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Ddx6P54823 Igsf9b-202ENSMUST00000133213 4239 ntAPPRIS P2 TSL 5 BASIC12.92□□□□□ -0.34
Ddx6P54823 Zc3h7b-201ENSMUST00000109554 5958 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Ddx6P54823 Tmc8-201ENSMUST00000050874 2577 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
Ddx6P54823 Klhdc3-201ENSMUST00000071841 2123 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Ddx6P54823 Omp-201ENSMUST00000098281 2144 ntAPPRIS P1 BASIC12.92□□□□□ -0.34
Ddx6P54823 Gm16853-201ENSMUST00000181812 1986 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Ddx6P54823 Adgrl1-204ENSMUST00000131717 5152 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Ddx6P54823 6030442K20Rik-201ENSMUST00000180835 1540 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Ddx6P54823 Pla2g6-201ENSMUST00000047816 2963 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Ddx6P54823 Vasp-201ENSMUST00000032561 2215 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Ddx6P54823 Phf24-201ENSMUST00000069184 6392 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Ddx6P54823 Nr2f2-201ENSMUST00000032768 4222 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Ddx6P54823 Esm1-201ENSMUST00000038144 2097 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Ddx6P54823 Phactr3-201ENSMUST00000103065 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Ddx6P54823 Pphln1-204ENSMUST00000165935 3473 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Ddx6P54823 AC122197.2-201ENSMUST00000219196 1635 ntBASIC12.91□□□□□ -0.34
Ddx6P54823 Cdyl-202ENSMUST00000163595 3575 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Ddx6P54823 Ssh3-202ENSMUST00000113852 2735 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Ddx6P54823 Vps29-208ENSMUST00000155671 2716 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
Ddx6P54823 Ssh3-201ENSMUST00000037992 2728 ntAPPRIS P2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Ddx6P54823 H2-Ob-202ENSMUST00000167280 1878 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Ddx6P54823 Esam-201ENSMUST00000002011 1865 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Ddx6P54823 Stox2-201ENSMUST00000079195 10467 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Ddx6P54823 Zkscan4-201ENSMUST00000062609 2400 ntAPPRIS P1 TSL 2 BASIC12.91□□□□□ -0.34
Ddx6P54823 Pla2g5-204ENSMUST00000102513 2289 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
Ddx6P54823 Tfe3-211ENSMUST00000137467 3390 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Ddx6P54823 Dpp6-204ENSMUST00000122171 4720 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Ddx6P54823 Cyp4f39-201ENSMUST00000003413 1599 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
Ddx6P54823 Krt31-201ENSMUST00000007318 1581 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Ddx6P54823 Ints13-201ENSMUST00000032427 3059 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Ddx6P54823 Rnpepl1-201ENSMUST00000027487 3337 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Ddx6P54823 Scg3-201ENSMUST00000034699 2384 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Ddx6P54823 Pxylp1-203ENSMUST00000119141 2768 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Ddx6P54823 Gm1661-203ENSMUST00000165128 1837 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.34
Ddx6P54823 Ugt1a2-201ENSMUST00000049289 2211 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Ddx6P54823 Tax1bp3-202ENSMUST00000108477 1153 ntTSL 5 BASIC12.91□□□□□ -0.34
Ddx6P54823 Gm19187-201ENSMUST00000206781 892 ntBASIC12.91□□□□□ -0.34
Ddx6P54823 Phgdh-ps1-201ENSMUST00000207540 754 ntBASIC12.91□□□□□ -0.34
Ddx6P54823 AC125206.1-201ENSMUST00000214070 739 ntTSL 5 BASIC12.91□□□□□ -0.34
Ddx6P54823 Nsd1-205ENSMUST00000224693 852 ntBASIC12.91□□□□□ -0.34
Ddx6P54823 4930562F07Rik-201ENSMUST00000028061 830 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Ddx6P54823 Tmem210-201ENSMUST00000028340 516 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Ddx6P54823 Pglyrp1-201ENSMUST00000032573 694 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Ddx6P54823 Hdac5-203ENSMUST00000107151 4852 ntTSL 5 BASIC12.91□□□□□ -0.34
Ddx6P54823 Slc22a15-201ENSMUST00000106928 6573 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
Ddx6P54823 Mdm4-201ENSMUST00000067398 1914 ntAPPRIS ALT1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Ddx6P54823 Lexm-204ENSMUST00000189032 1549 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Ddx6P54823 Parp10-202ENSMUST00000165738 3367 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Ddx6P54823 Bcl11a-202ENSMUST00000109514 5989 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Ddx6P54823 Copb2-201ENSMUST00000035033 3050 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Ddx6P54823 Minos1-203ENSMUST00000143971 2549 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Ddx6P54823 Kcnq1-201ENSMUST00000009689 3029 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Ddx6P54823 Abr-205ENSMUST00000108408 3534 ntTSL 5 BASIC12.91□□□□□ -0.34
Ddx6P54823 Gm4262-201ENSMUST00000180624 1986 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Ddx6P54823 Mbp-205ENSMUST00000091789 4797 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Ddx6P54823 Trp53-202ENSMUST00000108657 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Ddx6P54823 Mest-211ENSMUST00000163949 2561 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.34
Ddx6P54823 Prss36-201ENSMUST00000094026 3061 ntAPPRIS ALT2 TSL 5 BASIC12.9□□□□□ -0.34
Ddx6P54823 Hif3a-202ENSMUST00000108492 6402 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Ddx6P54823 Cdh7-206ENSMUST00000137092 2681 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Ddx6P54823 Kars-203ENSMUST00000164470 2189 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Ddx6P54823 Ncor2-205ENSMUST00000111398 8808 ntAPPRIS ALT2 TSL 5 BASIC12.9□□□□□ -0.34
Ddx6P54823 Snph-201ENSMUST00000028951 4730 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 31 ms