Protein–RNA interactions for Protein: P54729

Nub1, NEDD8 ultimate buster 1, mousemouse

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nub1P54729 Ins2-204ENSMUST00000105932 455 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Nub1P54729 9230102O04Rik-201ENSMUST00000114915 528 ntAPPRIS P1 TSL 2 BASIC13.74□□□□□ -0.21
Nub1P54729 1700030C14Rik-201ENSMUST00000139912 756 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Nub1P54729 Gm13850-201ENSMUST00000140465 623 ntTSL 3 BASIC13.74□□□□□ -0.21
Nub1P54729 1700015O11Rik-201ENSMUST00000180964 678 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Nub1P54729 Gm8565-201ENSMUST00000183259 1014 ntBASIC13.74□□□□□ -0.21
Nub1P54729 Gm37667-201ENSMUST00000193103 752 ntTSL 5 BASIC13.74□□□□□ -0.21
Nub1P54729 Gm43416-201ENSMUST00000201916 1015 ntBASIC13.74□□□□□ -0.21
Nub1P54729 Ins2-201ENSMUST00000000220 478 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Nub1P54729 AC022775.2-201ENSMUST00000227885 646 ntBASIC13.74□□□□□ -0.21
Nub1P54729 4921530L21Rik-202ENSMUST00000228913 1115 ntAPPRIS P1 BASIC13.74□□□□□ -0.21
Nub1P54729 Cox7a2-201ENSMUST00000034881 659 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Nub1P54729 Prss2-201ENSMUST00000070380 815 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Nub1P54729 Ifi27-202ENSMUST00000076702 828 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Nub1P54729 Gm27194-201ENSMUST00000175753 2936 ntBASIC13.74□□□□□ -0.21
Nub1P54729 Ptk2-201ENSMUST00000110036 4184 ntAPPRIS P2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Nub1P54729 Rab10os-202ENSMUST00000177896 2872 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Nub1P54729 Il12rb1-201ENSMUST00000000808 2873 ntAPPRIS P2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Nub1P54729 Naa40-201ENSMUST00000025675 3275 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Nub1P54729 Kcnk2-202ENSMUST00000110920 3572 ntAPPRIS ALT1 TSL 5 BASIC13.74□□□□□ -0.21
Nub1P54729 Ttbk2-203ENSMUST00000085840 11152 ntAPPRIS P1 TSL 5 BASIC13.74□□□□□ -0.21
Nub1P54729 Dnd1-201ENSMUST00000061522 1451 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Nub1P54729 Cyp2b10-201ENSMUST00000005477 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Nub1P54729 Calcr-204ENSMUST00000170266 2175 ntAPPRIS P4 TSL 1 (best) BASIC13.73□□□□□ -0.21
Nub1P54729 Pcdhac1-201ENSMUST00000007584 5419 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Nub1P54729 Mark2-215ENSMUST00000168872 2124 ntAPPRIS ALT2 TSL 5 BASIC13.73□□□□□ -0.21
Nub1P54729 Gne-209ENSMUST00000173234 2149 ntTSL 5 BASIC13.73□□□□□ -0.21
Nub1P54729 Terb2-201ENSMUST00000028661 2115 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Nub1P54729 Fosb-207ENSMUST00000208505 3523 ntTSL 5 BASIC13.73□□□□□ -0.21
Nub1P54729 Clpb-211ENSMUST00000209579 4159 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Nub1P54729 Pcnx3-202ENSMUST00000113615 7264 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Nub1P54729 Atp8a1-202ENSMUST00000072971 7154 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Nub1P54729 Tctn2-207ENSMUST00000185820 2733 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Nub1P54729 Trmt1l-201ENSMUST00000065625 2749 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Nub1P54729 Kcnn1-204ENSMUST00000212086 2964 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Nub1P54729 Rsph3b-201ENSMUST00000024572 1614 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Nub1P54729 Ero1lb-201ENSMUST00000071973 4239 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Nub1P54729 Cadm2-202ENSMUST00000120594 3248 ntAPPRIS ALT1 TSL 5 BASIC13.73□□□□□ -0.21
Nub1P54729 Gm23931-201ENSMUST00000103842 109 ntBASIC13.73□□□□□ -0.21
Nub1P54729 Gm14127-201ENSMUST00000117906 678 ntBASIC13.73□□□□□ -0.21
Nub1P54729 Gm15479-201ENSMUST00000139309 1133 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Nub1P54729 Psme1-202ENSMUST00000172738 681 ntTSL 5 BASIC13.73□□□□□ -0.21
Nub1P54729 1700122O11Rik-201ENSMUST00000178823 771 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Nub1P54729 Gm18916-201ENSMUST00000198264 1246 ntBASIC13.73□□□□□ -0.21
Nub1P54729 AC158516.1-201ENSMUST00000213921 205 ntTSL 5 BASIC13.73□□□□□ -0.21
Nub1P54729 1700029I15Rik-201ENSMUST00000054316 364 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Nub1P54729 Hmgb1-202ENSMUST00000093196 1092 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Nub1P54729 Prkce-201ENSMUST00000097274 3161 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Nub1P54729 C5ar1-201ENSMUST00000050770 2481 ntAPPRIS P1 TSL 3 BASIC13.73□□□□□ -0.21
Nub1P54729 Fn1-201ENSMUST00000055226 8315 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.21
Nub1P54729 Kcnk13-201ENSMUST00000049788 3078 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Nub1P54729 Tekt4-201ENSMUST00000025002 1532 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Nub1P54729 Evi5l-202ENSMUST00000176072 3932 ntAPPRIS ALT2 TSL 5 BASIC13.73□□□□□ -0.21
Nub1P54729 Kdm3a-214ENSMUST00000207023 4753 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
Nub1P54729 Aifm3-201ENSMUST00000023448 2688 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.21
Nub1P54729 Gm45253-201ENSMUST00000210694 2076 ntTSL 5 BASIC13.73□□□□□ -0.21
Nub1P54729 Tbc1d22a-201ENSMUST00000063414 3229 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Nub1P54729 Mcph1-201ENSMUST00000039412 4662 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Nub1P54729 Nr3c1-203ENSMUST00000115567 6436 ntAPPRIS P2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Nub1P54729 Twistnb-201ENSMUST00000020877 4325 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Nub1P54729 Rbbp5-207ENSMUST00000190997 2856 ntAPPRIS P2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Nub1P54729 Ldhal6b-201ENSMUST00000189788 1445 ntAPPRIS P1 BASIC13.73□□□□□ -0.21
Nub1P54729 Mast3-203ENSMUST00000211948 4251 ntAPPRIS P2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Nub1P54729 Pphln1-202ENSMUST00000068457 3816 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Nub1P54729 Crmp1-201ENSMUST00000031004 2906 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Nub1P54729 Sp7-201ENSMUST00000078508 2906 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Nub1P54729 Irf1-202ENSMUST00000108920 2137 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
Nub1P54729 Art3-204ENSMUST00000119587 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Nub1P54729 Dmac2-202ENSMUST00000085953 2387 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
Nub1P54729 Rp2-202ENSMUST00000115387 4498 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Nub1P54729 Trpm4-209ENSMUST00000211743 3673 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Nub1P54729 Taok2-202ENSMUST00000117394 4985 ntAPPRIS P4 TSL 1 (best) BASIC13.72□□□□□ -0.21
Nub1P54729 Klhdc7b-201ENSMUST00000166926 1818 ntAPPRIS P2 BASIC13.72□□□□□ -0.21
Nub1P54729 Pole3-201ENSMUST00000030091 1805 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Nub1P54729 Nif3l1-206ENSMUST00000171597 2098 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Nub1P54729 Grip1-212ENSMUST00000147356 4145 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Nub1P54729 Pcca-201ENSMUST00000038374 2592 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Nub1P54729 Chpf2-201ENSMUST00000088295 5371 ntAPPRIS P1 TSL 2 BASIC13.72□□□□□ -0.21
Nub1P54729 Gm13813-201ENSMUST00000120998 787 ntBASIC13.72□□□□□ -0.21
Nub1P54729 Sumo3-206ENSMUST00000141228 772 ntTSL 3 BASIC13.72□□□□□ -0.21
Nub1P54729 U2af1l4-215ENSMUST00000166257 546 ntTSL 5 BASIC13.72□□□□□ -0.21
Nub1P54729 Gm6222-202ENSMUST00000182143 629 ntBASIC13.72□□□□□ -0.21
Nub1P54729 Asgr1-201ENSMUST00000018699 1259 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
Nub1P54729 Gm18062-201ENSMUST00000208020 547 ntBASIC13.72□□□□□ -0.21
Nub1P54729 Gm18055-201ENSMUST00000208254 547 ntBASIC13.72□□□□□ -0.21
Nub1P54729 2810047C21Rik1-202ENSMUST00000210322 1179 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Nub1P54729 AC148335.1-201ENSMUST00000218778 818 ntTSL 5 BASIC13.72□□□□□ -0.21
Nub1P54729 Tatdn3-201ENSMUST00000027945 1196 ntAPPRIS ALT2 TSL 3 BASIC13.72□□□□□ -0.21
Nub1P54729 Mir339-201ENSMUST00000083659 96 ntBASIC13.72□□□□□ -0.21
Nub1P54729 Syngr2-201ENSMUST00000026649 1520 ntAPPRIS P2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Nub1P54729 Tbata-201ENSMUST00000035894 1506 ntAPPRIS P3 TSL 5 BASIC13.72□□□□□ -0.21
Nub1P54729 Dppa4-202ENSMUST00000096045 1534 ntAPPRIS P4 TSL 1 (best) BASIC13.72□□□□□ -0.21
Nub1P54729 Dnmbp-202ENSMUST00000212032 5074 ntAPPRIS ALT2 TSL 5 BASIC13.72□□□□□ -0.21
Nub1P54729 Elovl6-202ENSMUST00000197070 2275 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Nub1P54729 Micalcl-201ENSMUST00000033033 2259 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Nub1P54729 Bbs4-201ENSMUST00000026265 2518 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Nub1P54729 Vmp1-201ENSMUST00000018315 2787 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Nub1P54729 Hvcn1-201ENSMUST00000072602 2790 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Nub1P54729 Lnx1-201ENSMUST00000039744 2727 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Nub1P54729 Gm3052-202ENSMUST00000188254 2224 ntBASIC13.72□□□□□ -0.21
Retrieved 100 of 76,532 protein–RNA pairs in 28.6 ms