Protein–RNA interactions for Protein: P54254

Atxn1, Ataxin-1, mousemouse

Predictions only

Length 791 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atxn1P54254 Gm23699-201ENSMUST00000158835 135 ntBASIC12.67□□□□□ -0.38
Atxn1P54254 Gm8194-201ENSMUST00000159783 859 ntBASIC12.67□□□□□ -0.38
Atxn1P54254 Sap25-201ENSMUST00000166099 1101 ntAPPRIS P2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Atxn1P54254 Gm17135-201ENSMUST00000167009 564 ntTSL 3 BASIC12.67□□□□□ -0.38
Atxn1P54254 Iqcf6-201ENSMUST00000171091 537 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
Atxn1P54254 Gm5070-201ENSMUST00000177599 862 ntBASIC12.67□□□□□ -0.38
Atxn1P54254 2610016A17Rik-202ENSMUST00000186768 689 ntBASIC12.67□□□□□ -0.38
Atxn1P54254 Ovol3-201ENSMUST00000189482 731 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
Atxn1P54254 Gm28760-202ENSMUST00000190376 481 ntTSL 5 BASIC12.67□□□□□ -0.38
Atxn1P54254 Gm28694-201ENSMUST00000190681 722 ntTSL 3 BASIC12.67□□□□□ -0.38
Atxn1P54254 Gm18393-201ENSMUST00000208349 1131 ntBASIC12.67□□□□□ -0.38
Atxn1P54254 Cotl1-203ENSMUST00000211873 826 ntTSL 5 BASIC12.67□□□□□ -0.38
Atxn1P54254 AC110091.1-201ENSMUST00000216004 691 ntTSL 3 BASIC12.67□□□□□ -0.38
Atxn1P54254 Ly6g5c-201ENSMUST00000037849 509 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Atxn1P54254 Mrps21-201ENSMUST00000067298 488 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Atxn1P54254 Cnn1-201ENSMUST00000001384 2381 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Atxn1P54254 AC121805.2-201ENSMUST00000218808 2538 ntBASIC12.67□□□□□ -0.38
Atxn1P54254 Slc4a1ap-209ENSMUST00000202214 2806 ntAPPRIS P3 TSL 5 BASIC12.67□□□□□ -0.38
Atxn1P54254 Dysf-213ENSMUST00000203803 6590 ntTSL 5 BASIC12.67□□□□□ -0.38
Atxn1P54254 Nptn-206ENSMUST00000176557 1898 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Atxn1P54254 Mmp21-201ENSMUST00000033278 1858 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Atxn1P54254 Slc25a15-201ENSMUST00000033871 3430 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Atxn1P54254 Gm10729-202ENSMUST00000193403 1375 ntBASIC12.67□□□□□ -0.38
Atxn1P54254 Gm45242-201ENSMUST00000210666 2129 ntBASIC12.67□□□□□ -0.38
Atxn1P54254 Hnrnpf-203ENSMUST00000167182 2271 ntAPPRIS P1 TSL 3 BASIC12.67□□□□□ -0.38
Atxn1P54254 Armc8-201ENSMUST00000035043 4647 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Atxn1P54254 Sema6c-203ENSMUST00000107217 3595 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Atxn1P54254 Rps6ka4-202ENSMUST00000170516 3105 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Atxn1P54254 Rps6ka4-201ENSMUST00000025903 3105 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Atxn1P54254 Aamp-202ENSMUST00000178235 1756 ntAPPRIS ALT1 TSL 5 BASIC12.66□□□□□ -0.38
Atxn1P54254 Enc1-201ENSMUST00000041623 4737 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Atxn1P54254 Ccnc-204ENSMUST00000120679 1453 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Atxn1P54254 Grin1-204ENSMUST00000114310 4276 ntTSL 5 BASIC12.66□□□□□ -0.38
Atxn1P54254 Dpysl5-202ENSMUST00000101442 1309 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Atxn1P54254 Gm9947-201ENSMUST00000067599 2920 ntBASIC12.66□□□□□ -0.38
Atxn1P54254 Rph3a-203ENSMUST00000202326 2621 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Atxn1P54254 Mypopos-202ENSMUST00000205975 2321 ntBASIC12.66□□□□□ -0.38
Atxn1P54254 Lrrc34-201ENSMUST00000029252 1891 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Atxn1P54254 Ptpru-203ENSMUST00000105987 5484 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Atxn1P54254 Zfp365-201ENSMUST00000064656 4259 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Atxn1P54254 B230206H07Rik-202ENSMUST00000134845 3269 ntTSL 5 BASIC12.66□□□□□ -0.38
Atxn1P54254 Gm14109-201ENSMUST00000118814 309 ntBASIC12.66□□□□□ -0.38
Atxn1P54254 Gm16481-201ENSMUST00000119074 1227 ntBASIC12.66□□□□□ -0.38
Atxn1P54254 Gm16397-201ENSMUST00000122201 494 ntBASIC12.66□□□□□ -0.38
Atxn1P54254 Pabpc1l2a-ps-201ENSMUST00000128361 513 ntBASIC12.66□□□□□ -0.38
Atxn1P54254 Gm14051-201ENSMUST00000131603 377 ntTSL 3 BASIC12.66□□□□□ -0.38
Atxn1P54254 Gm17105-201ENSMUST00000163715 652 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Atxn1P54254 Gm2546-201ENSMUST00000182630 991 ntBASIC12.66□□□□□ -0.38
Atxn1P54254 Gm4691-202ENSMUST00000182989 885 ntTSL 5 BASIC12.66□□□□□ -0.38
Atxn1P54254 Tmem176b-206ENSMUST00000203355 1202 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
Atxn1P54254 Gm45219-201ENSMUST00000205602 465 ntBASIC12.66□□□□□ -0.38
Atxn1P54254 Gm44551-201ENSMUST00000208804 171 ntBASIC12.66□□□□□ -0.38
Atxn1P54254 Galnt6-201ENSMUST00000052069 3798 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Atxn1P54254 Smarca4-204ENSMUST00000174008 5405 ntAPPRIS ALT1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Atxn1P54254 Slc12a8-202ENSMUST00000117134 2081 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Atxn1P54254 Mfge8-202ENSMUST00000107409 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Atxn1P54254 1600020E01Rik-206ENSMUST00000204663 2007 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Atxn1P54254 Fam49b-201ENSMUST00000063838 3797 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Atxn1P54254 Hnrnph1-203ENSMUST00000109142 2427 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Atxn1P54254 Bcl2l1-201ENSMUST00000007803 2417 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Atxn1P54254 Hp1bp3-201ENSMUST00000030541 3311 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
Atxn1P54254 Yipf1-201ENSMUST00000075693 1321 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Atxn1P54254 Ccdc94-201ENSMUST00000086869 1311 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Atxn1P54254 Ssc5d-201ENSMUST00000057612 4348 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Atxn1P54254 Fetub-203ENSMUST00000167399 1421 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Atxn1P54254 Cd74-202ENSMUST00000097563 1410 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Atxn1P54254 Exosc2-201ENSMUST00000038474 1686 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Atxn1P54254 Cd34-202ENSMUST00000110815 2554 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Atxn1P54254 Zfhx2os-202ENSMUST00000183750 4375 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Atxn1P54254 Gm10961-201ENSMUST00000106703 144 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.38
Atxn1P54254 Nmb-202ENSMUST00000119428 678 ntAPPRIS ALT2 TSL 2 BASIC12.65□□□□□ -0.38
Atxn1P54254 Mitd1-205ENSMUST00000139725 1175 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Atxn1P54254 Tnni1-205ENSMUST00000148201 1150 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.38
Atxn1P54254 Tnni1-206ENSMUST00000152075 1038 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.38
Atxn1P54254 Dnajc25-204ENSMUST00000152199 1141 ntTSL 5 BASIC12.65□□□□□ -0.38
Atxn1P54254 Tnni1-207ENSMUST00000152208 1105 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.38
Atxn1P54254 Gm20457-201ENSMUST00000173374 682 ntTSL 3 BASIC12.65□□□□□ -0.38
Atxn1P54254 Pxt1-201ENSMUST00000051526 710 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Atxn1P54254 Phf24-201ENSMUST00000069184 6392 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Atxn1P54254 Gm6994-201ENSMUST00000088880 1163 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Atxn1P54254 Uqcrq-201ENSMUST00000061326 1521 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Atxn1P54254 Pcgf2-201ENSMUST00000018681 1755 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Atxn1P54254 Hoxb9-202ENSMUST00000174042 2269 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Atxn1P54254 Usp13-201ENSMUST00000072312 7580 ntAPPRIS P2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Atxn1P54254 Plcd3-201ENSMUST00000103077 3023 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Atxn1P54254 Acin1-216ENSMUST00000141453 2381 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Atxn1P54254 Rbm8a-202ENSMUST00000196456 2604 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Atxn1P54254 6330537M06Rik-201ENSMUST00000212384 1642 ntBASIC12.65□□□□□ -0.38
Atxn1P54254 Grip1-202ENSMUST00000077871 3720 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Atxn1P54254 Hdgfl2-210ENSMUST00000225843 2238 ntAPPRIS ALT2 BASIC12.65□□□□□ -0.38
Atxn1P54254 9930014A18Rik-201ENSMUST00000180730 3074 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Atxn1P54254 Nrf1-210ENSMUST00000115211 3295 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Atxn1P54254 Sparc-209ENSMUST00000216313 1304 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
Atxn1P54254 Nagk-202ENSMUST00000113850 1918 ntTSL 5 BASIC12.64□□□□□ -0.39
Atxn1P54254 Zfp354c-201ENSMUST00000000632 1683 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Atxn1P54254 Fgfr1-201ENSMUST00000084027 5025 ntAPPRIS P3 TSL 5 BASIC12.64□□□□□ -0.39
Atxn1P54254 Espn-213ENSMUST00000105659 3595 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
Atxn1P54254 Sin3a-208ENSMUST00000168678 5206 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
Atxn1P54254 Clcn6-201ENSMUST00000030879 3306 ntAPPRIS P2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Atxn1P54254 Actrt2-201ENSMUST00000060062 1435 ntAPPRIS P1 BASIC12.64□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 49.6 ms