Protein–RNA interactions for Protein: P53783

Sox1, Transcription factor SOX-1, mousemouse

Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox1P53783 Slc14a2-202ENSMUST00000163367 1428 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Sox1P53783 Pdk2-201ENSMUST00000038431 2246 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Sox1P53783 Elmod1-201ENSMUST00000048409 2605 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Sox1P53783 Kif3c-205ENSMUST00000220210 4144 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Sox1P53783 Ccdc183-201ENSMUST00000028309 1719 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
Sox1P53783 Mmp14-206ENSMUST00000225641 3238 ntBASIC12.97□□□□□ -0.33
Sox1P53783 Adh4-201ENSMUST00000013458 1314 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Sox1P53783 2900069G24Rik-201ENSMUST00000192780 1311 ntBASIC12.97□□□□□ -0.33
Sox1P53783 Acox3-204ENSMUST00000114238 2825 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Sox1P53783 Hnf1a-201ENSMUST00000031535 3191 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Sox1P53783 Kcnj3-203ENSMUST00000112633 1679 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Sox1P53783 Ell3-202ENSMUST00000116432 1674 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Sox1P53783 Lpar1-201ENSMUST00000055018 3512 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
Sox1P53783 Klhl32-204ENSMUST00000108218 7143 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
Sox1P53783 Pcdha1-202ENSMUST00000193839 4925 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Sox1P53783 Gm23596-201ENSMUST00000104304 132 ntBASIC12.97□□□□□ -0.33
Sox1P53783 Uqcc1-202ENSMUST00000109631 1091 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
Sox1P53783 Surf6-202ENSMUST00000114043 894 ntTSL 5 BASIC12.97□□□□□ -0.33
Sox1P53783 Gm12218-201ENSMUST00000117666 399 ntBASIC12.97□□□□□ -0.33
Sox1P53783 Gm11956-201ENSMUST00000119525 512 ntBASIC12.97□□□□□ -0.33
Sox1P53783 Treml4-202ENSMUST00000125426 992 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Sox1P53783 Gm7568-202ENSMUST00000160446 709 ntTSL 3 BASIC12.97□□□□□ -0.33
Sox1P53783 Gm15523-201ENSMUST00000160463 439 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Sox1P53783 Gm17040-201ENSMUST00000168672 548 ntTSL 3 BASIC12.97□□□□□ -0.33
Sox1P53783 Spaca6-209ENSMUST00000172097 1073 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
Sox1P53783 Gm8018-201ENSMUST00000173536 789 ntBASIC12.97□□□□□ -0.33
Sox1P53783 Gm23363-201ENSMUST00000175024 79 ntBASIC12.97□□□□□ -0.33
Sox1P53783 Smco4-202ENSMUST00000178999 820 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Sox1P53783 Gm10731-201ENSMUST00000181171 448 ntBASIC12.97□□□□□ -0.33
Sox1P53783 Gm28516-201ENSMUST00000190257 663 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Sox1P53783 8030442B05Rik-201ENSMUST00000192626 1035 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Sox1P53783 2010109P13Rik-201ENSMUST00000204605 392 ntBASIC12.97□□□□□ -0.33
Sox1P53783 Gm4924-205ENSMUST00000211099 490 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Sox1P53783 Gm45500-201ENSMUST00000211676 803 ntBASIC12.97□□□□□ -0.33
Sox1P53783 Gm270-201ENSMUST00000223010 976 ntBASIC12.97□□□□□ -0.33
Sox1P53783 Tmem258-201ENSMUST00000040372 606 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Sox1P53783 Cox17-201ENSMUST00000050273 444 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Sox1P53783 Klhdc8b-207ENSMUST00000193286 2956 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Sox1P53783 Lats2-210ENSMUST00000174694 3287 ntAPPRIS P1 TSL 2 BASIC12.97□□□□□ -0.33
Sox1P53783 Epb41-208ENSMUST00000105981 5303 ntAPPRIS P3 TSL 5 BASIC12.97□□□□□ -0.33
Sox1P53783 Sbsn-201ENSMUST00000080518 2221 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
Sox1P53783 E230013L22Rik-201ENSMUST00000180408 1856 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Sox1P53783 Gdf10-201ENSMUST00000168727 5210 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Sox1P53783 Nrd1-202ENSMUST00000102736 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Sox1P53783 Wnk1-203ENSMUST00000088644 11330 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
Sox1P53783 Aldh3b2-201ENSMUST00000143380 2141 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Sox1P53783 Serpinh1-203ENSMUST00000207849 2128 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Sox1P53783 Txn2-203ENSMUST00000109747 1778 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Sox1P53783 Gtf2h1-201ENSMUST00000006774 2736 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Sox1P53783 2610301B20Rik-202ENSMUST00000101504 2053 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
Sox1P53783 Wbscr25-202ENSMUST00000148729 2075 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Sox1P53783 Ly9-201ENSMUST00000004827 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Sox1P53783 Trmt10c-201ENSMUST00000059052 3002 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Sox1P53783 Klf15-202ENSMUST00000113530 2374 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.33
Sox1P53783 Capn7-201ENSMUST00000022451 3648 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Sox1P53783 Ifnar2-202ENSMUST00000089042 2580 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Sox1P53783 Gm10457-201ENSMUST00000222619 1906 ntTSL 2 BASIC12.96□□□□□ -0.33
Sox1P53783 Ormdl1-201ENSMUST00000027266 1910 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Sox1P53783 Gm13293-201ENSMUST00000131188 1615 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Sox1P53783 Setd1b-206ENSMUST00000174836 7515 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.33
Sox1P53783 Krtap10-10-201ENSMUST00000218843 1306 ntAPPRIS P1 BASIC12.96□□□□□ -0.33
Sox1P53783 Atp13a2-201ENSMUST00000037055 3956 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.33
Sox1P53783 Igsf23-204ENSMUST00000208974 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Sox1P53783 Dysf-214ENSMUST00000204354 6432 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.33
Sox1P53783 Gm28037-201ENSMUST00000122365 611 ntTSL 3 BASIC12.96□□□□□ -0.33
Sox1P53783 Gm13205-201ENSMUST00000123548 562 ntTSL 3 BASIC12.96□□□□□ -0.33
Sox1P53783 B230206L02Rik-202ENSMUST00000132584 695 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Sox1P53783 Gm15507-201ENSMUST00000133523 592 ntTSL 5 BASIC12.96□□□□□ -0.33
Sox1P53783 Pitx2-204ENSMUST00000172645 915 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Sox1P53783 Gm18059-201ENSMUST00000208073 580 ntBASIC12.96□□□□□ -0.33
Sox1P53783 Lgals4-207ENSMUST00000208971 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Sox1P53783 1700023F06Rik-201ENSMUST00000021323 1199 ntAPPRIS P2 TSL 5 BASIC12.96□□□□□ -0.33
Sox1P53783 Gm39404-201ENSMUST00000216350 313 ntBASIC12.96□□□□□ -0.33
Sox1P53783 Il25-201ENSMUST00000037863 1064 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Sox1P53783 Cmbl-201ENSMUST00000070918 1155 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Sox1P53783 Gm4744-201ENSMUST00000073642 792 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.33
Sox1P53783 Myef2-206ENSMUST00000142718 2942 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.33
Sox1P53783 CT010488.1-201ENSMUST00000214890 1522 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Sox1P53783 Alkbh3os1-201ENSMUST00000028621 1549 ntTSL 5 BASIC12.96□□□□□ -0.33
Sox1P53783 Pgbd5-201ENSMUST00000052580 2824 ntAPPRIS P2 TSL 5 BASIC12.96□□□□□ -0.34
Sox1P53783 Phka1-206ENSMUST00000122022 6115 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.34
Sox1P53783 Phka1-202ENSMUST00000052012 6115 ntAPPRIS P4 TSL 1 (best) BASIC12.96□□□□□ -0.34
Sox1P53783 Tssk4-201ENSMUST00000007735 1420 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
Sox1P53783 Sept4-203ENSMUST00000107960 1653 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
Sox1P53783 Llph-201ENSMUST00000020444 1664 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Sox1P53783 Cdc73-201ENSMUST00000018337 11586 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Sox1P53783 Cbarp-215ENSMUST00000170219 2941 ntAPPRIS P2 TSL 5 BASIC12.95□□□□□ -0.34
Sox1P53783 Trmt1-205ENSMUST00000125370 2114 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
Sox1P53783 Gm6992-201ENSMUST00000217973 1607 ntBASIC12.95□□□□□ -0.34
Sox1P53783 Ripk3-201ENSMUST00000022830 1892 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Sox1P53783 Sema6b-202ENSMUST00000167545 3847 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Sox1P53783 Vps53-201ENSMUST00000056601 2833 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Sox1P53783 Gm5478-201ENSMUST00000100184 2566 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
Sox1P53783 Dnm1-205ENSMUST00000113365 3257 ntAPPRIS ALT1 TSL 5 BASIC12.95□□□□□ -0.34
Sox1P53783 Actg2-201ENSMUST00000075161 1333 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Sox1P53783 Arl6ip6-201ENSMUST00000028336 2548 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Sox1P53783 Mapt-203ENSMUST00000106989 2250 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
Sox1P53783 4931414P19Rik-201ENSMUST00000022786 2670 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Sox1P53783 Aff2-201ENSMUST00000033532 4523 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Sox1P53783 Zscan10-203ENSMUST00000117606 891 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 60.6 ms