Protein–RNA interactions for Protein: P48754

Brca1, Breast cancer type 1 susceptibility protein homolog, mousemouse

Predictions only

Length 1,812 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Brca1P48754 Ighv1-48-201ENSMUST00000191795 294 ntBASIC14.01□□□□□ -0.17
Brca1P48754 Dnajb6-212ENSMUST00000198694 505 ntTSL 3 BASIC14.01□□□□□ -0.17
Brca1P48754 Isg20-206ENSMUST00000205981 834 ntTSL 3 BASIC14.01□□□□□ -0.17
Brca1P48754 AC151275.1-201ENSMUST00000224870 585 ntBASIC14.01□□□□□ -0.17
Brca1P48754 Cct5-201ENSMUST00000022842 1853 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Brca1P48754 Scg5-201ENSMUST00000024005 1208 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Brca1P48754 F7-201ENSMUST00000033820 1859 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Brca1P48754 Sirpa-202ENSMUST00000099113 3342 ntTSL 3 BASIC14.01□□□□□ -0.17
Brca1P48754 Kcnn1-201ENSMUST00000110078 4047 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Brca1P48754 Kcnn1-202ENSMUST00000110081 4045 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
Brca1P48754 Rufy3-203ENSMUST00000196894 3703 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Brca1P48754 Stx6-201ENSMUST00000027743 4589 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Brca1P48754 Cggbp1-201ENSMUST00000067744 4425 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Brca1P48754 Arnt-203ENSMUST00000102749 2699 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Brca1P48754 Gm26588-202ENSMUST00000181355 2538 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Brca1P48754 5930412G12Rik-203ENSMUST00000134673 2087 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Brca1P48754 Arhgap11a-204ENSMUST00000110949 4458 ntAPPRIS P2 TSL 5 BASIC14.01□□□□□ -0.17
Brca1P48754 Gm37795-201ENSMUST00000194216 2459 ntBASIC14.01□□□□□ -0.17
Brca1P48754 Hist2h4-201ENSMUST00000171473 1630 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
Brca1P48754 Timp2-201ENSMUST00000017610 3709 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Brca1P48754 Pias3-202ENSMUST00000107076 2858 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Brca1P48754 Mms22l-202ENSMUST00000108222 4478 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
Brca1P48754 Gm45706-201ENSMUST00000213063 2136 ntBASIC14.01□□□□□ -0.17
Brca1P48754 Pcdhgb8-202ENSMUST00000208907 2796 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Brca1P48754 Lgals12-202ENSMUST00000099729 2757 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Brca1P48754 Gm15856-201ENSMUST00000124853 1162 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Brca1P48754 Parvaos-201ENSMUST00000154848 1285 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Brca1P48754 1700025F24Rik-201ENSMUST00000185238 894 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Brca1P48754 Gm34821-201ENSMUST00000208399 1031 ntTSL 5 BASIC14.01□□□□□ -0.17
Brca1P48754 Psmg2-201ENSMUST00000025418 1059 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Brca1P48754 Safb2-201ENSMUST00000075510 3277 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Brca1P48754 Ubfd1-201ENSMUST00000033158 4849 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Brca1P48754 Kcns2-201ENSMUST00000072868 5456 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Brca1P48754 5330439B14Rik-201ENSMUST00000194811 1392 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Brca1P48754 Slc6a18-208ENSMUST00000222029 2005 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
Brca1P48754 Zfp740-201ENSMUST00000118729 4241 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Brca1P48754 Gm6034-201ENSMUST00000097331 1633 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Brca1P48754 Nt5dc2-206ENSMUST00000227794 1858 ntAPPRIS ALT2 BASIC14.01□□□□□ -0.17
Brca1P48754 Gm28496-202ENSMUST00000137742 2752 ntTSL 1 (best) BASIC14□□□□□ -0.17
Brca1P48754 Gpr146-201ENSMUST00000051293 4157 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Brca1P48754 Rgs6-207ENSMUST00000186323 1308 ntTSL 5 BASIC14□□□□□ -0.17
Brca1P48754 Synj2-210ENSMUST00000115791 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Brca1P48754 Ube2c-201ENSMUST00000001439 2191 ntTSL 1 (best) BASIC14□□□□□ -0.17
Brca1P48754 Gps1-201ENSMUST00000100134 1925 ntTSL 2 BASIC14□□□□□ -0.17
Brca1P48754 Ankrd17-203ENSMUST00000168058 9311 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
Brca1P48754 Gm22711-201ENSMUST00000116890 133 ntBASIC14□□□□□ -0.17
Brca1P48754 Gm16071-201ENSMUST00000119589 793 ntBASIC14□□□□□ -0.17
Brca1P48754 Prkaca-ps1-201ENSMUST00000120823 919 ntBASIC14□□□□□ -0.17
Brca1P48754 Rprl1-201ENSMUST00000158050 327 ntBASIC14□□□□□ -0.17
Brca1P48754 Anapc16-203ENSMUST00000182152 847 ntTSL 2 BASIC14□□□□□ -0.17
Brca1P48754 Gm17826-201ENSMUST00000189720 798 ntBASIC14□□□□□ -0.17
Brca1P48754 Gm37458-201ENSMUST00000194055 410 ntBASIC14□□□□□ -0.17
Brca1P48754 Gm44934-201ENSMUST00000208941 238 ntTSL 5 BASIC14□□□□□ -0.17
Brca1P48754 1700012D14Rik-204ENSMUST00000210788 547 ntTSL 3 BASIC14□□□□□ -0.17
Brca1P48754 Gm9797-202ENSMUST00000218003 294 ntBASIC14□□□□□ -0.17
Brca1P48754 Gm9111-201ENSMUST00000219394 709 ntBASIC14□□□□□ -0.17
Brca1P48754 AC166341.2-201ENSMUST00000220571 120 ntBASIC14□□□□□ -0.17
Brca1P48754 AC154184.3-201ENSMUST00000225620 1090 ntBASIC14□□□□□ -0.17
Brca1P48754 Gm5705-201ENSMUST00000066241 711 ntBASIC14□□□□□ -0.17
Brca1P48754 Olfr1230-201ENSMUST00000099787 918 ntAPPRIS P1 BASIC14□□□□□ -0.17
Brca1P48754 Sgce-209ENSMUST00000133306 1619 ntTSL 1 (best) BASIC14□□□□□ -0.17
Brca1P48754 Gm10433-202ENSMUST00000146364 1984 ntTSL 2 BASIC14□□□□□ -0.17
Brca1P48754 Ptprs-201ENSMUST00000067538 6855 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Brca1P48754 Efnb1-201ENSMUST00000052839 3258 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Brca1P48754 AC151895.1-201ENSMUST00000219025 1742 ntBASIC14□□□□□ -0.17
Brca1P48754 Galnt13-204ENSMUST00000112636 7530 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Brca1P48754 Nmral1-204ENSMUST00000120056 2440 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Brca1P48754 Kcnma1-213ENSMUST00000188991 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Brca1P48754 Tmc6-201ENSMUST00000026659 2865 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Brca1P48754 Mob3c-201ENSMUST00000030477 2884 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Brca1P48754 Tmem215-202ENSMUST00000179526 2276 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Brca1P48754 Vsig10-202ENSMUST00000111967 4236 ntAPPRIS P2 TSL 5 BASIC14□□□□□ -0.17
Brca1P48754 Sept4-203ENSMUST00000107960 1653 ntTSL 1 (best) BASIC14□□□□□ -0.17
Brca1P48754 Gm13384-201ENSMUST00000117166 1344 ntBASIC14□□□□□ -0.17
Brca1P48754 Nox3-201ENSMUST00000115800 1792 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Brca1P48754 Slc14a2-202ENSMUST00000163367 1428 ntTSL 1 (best) BASIC14□□□□□ -0.17
Brca1P48754 Epb41l2-201ENSMUST00000053748 4385 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
Brca1P48754 Gnai1-201ENSMUST00000074694 3135 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Brca1P48754 Pxylp1-203ENSMUST00000119141 2768 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Brca1P48754 Slc38a7-204ENSMUST00000212270 3315 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Brca1P48754 Gm26867-201ENSMUST00000180963 3615 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Brca1P48754 Wasf3-201ENSMUST00000016143 5196 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Brca1P48754 Sun3-202ENSMUST00000102909 1205 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
Brca1P48754 Mrpl55-202ENSMUST00000108784 729 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Brca1P48754 Gm13944-201ENSMUST00000126572 721 ntTSL 2 BASIC13.99□□□□□ -0.17
Brca1P48754 Gm11683-201ENSMUST00000147006 918 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Brca1P48754 Gm15996-201ENSMUST00000161925 762 ntTSL 5 BASIC13.99□□□□□ -0.17
Brca1P48754 Hspb9-202ENSMUST00000169833 726 ntAPPRIS P2 BASIC13.99□□□□□ -0.17
Brca1P48754 Ctdspl-202ENSMUST00000172464 798 ntAPPRIS ALT1 TSL 5 BASIC13.99□□□□□ -0.17
Brca1P48754 Lgals4-207ENSMUST00000208971 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Brca1P48754 Rps12-208ENSMUST00000220070 494 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Brca1P48754 Olfr1428-201ENSMUST00000087824 945 ntAPPRIS P1 BASIC13.99□□□□□ -0.17
Brca1P48754 Hps1-208ENSMUST00000162004 2847 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
Brca1P48754 Stam-202ENSMUST00000102960 5000 ntAPPRIS P2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Brca1P48754 Clec16a-205ENSMUST00000115827 2949 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Brca1P48754 Rnf31-201ENSMUST00000019443 3485 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Brca1P48754 Ttc23l-201ENSMUST00000022857 1931 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Brca1P48754 Plekha1-203ENSMUST00000120441 3777 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.17
Brca1P48754 Amz1-201ENSMUST00000060918 2683 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Brca1P48754 Smad4-202ENSMUST00000114939 2233 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 54.9 ms