Protein–RNA interactions for Protein: P48540

Gdnf, Glial cell line-derived neurotrophic factor, mousemouse

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GdnfP48540 D830024N08Rik-201ENSMUST00000212132 2899 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
GdnfP48540 Rhobtb1-205ENSMUST00000164034 2421 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
GdnfP48540 Snx6-201ENSMUST00000005798 1928 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
GdnfP48540 Gm14123-201ENSMUST00000156345 2658 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
GdnfP48540 Dnajc12-201ENSMUST00000043317 3025 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
GdnfP48540 Extl3-203ENSMUST00000225633 6013 ntAPPRIS P1 BASIC11.19□□□□□ -0.62
GdnfP48540 Cant1-203ENSMUST00000106287 1476 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
GdnfP48540 Zfp783-204ENSMUST00000130490 4419 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
GdnfP48540 Trpc2-201ENSMUST00000124189 2874 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
GdnfP48540 Arhgap25-202ENSMUST00000101197 2493 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
GdnfP48540 Esrp1-203ENSMUST00000108311 3864 ntTSL 5 BASIC11.18□□□□□ -0.62
GdnfP48540 Syne3-203ENSMUST00000109927 5263 ntAPPRIS ALT2 TSL 5 BASIC11.18□□□□□ -0.62
GdnfP48540 Ppp1r9b-202ENSMUST00000107748 3095 ntAPPRIS ALT2 TSL 1 (best) BASIC11.18□□□□□ -0.62
GdnfP48540 Syt16-203ENSMUST00000221220 8156 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
GdnfP48540 Zscan10-202ENSMUST00000115509 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC11.18□□□□□ -0.62
GdnfP48540 Pkm-202ENSMUST00000163694 2041 ntAPPRIS ALT1 TSL 5 BASIC11.18□□□□□ -0.62
GdnfP48540 Myh6-205ENSMUST00000226297 6008 ntAPPRIS P1 BASIC11.18□□□□□ -0.62
GdnfP48540 Gm44806-201ENSMUST00000205574 2303 ntBASIC11.18□□□□□ -0.62
GdnfP48540 Tnn-202ENSMUST00000131919 3987 ntTSL 5 BASIC11.18□□□□□ -0.62
GdnfP48540 Hp-201ENSMUST00000074898 1345 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
GdnfP48540 Arhgap35-202ENSMUST00000171937 6251 ntAPPRIS P1 TSL 5 BASIC11.18□□□□□ -0.62
GdnfP48540 Etaa1-201ENSMUST00000076661 4185 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
GdnfP48540 Tbc1d1-202ENSMUST00000101195 5432 ntAPPRIS P3 TSL 1 (best) BASIC11.18□□□□□ -0.62
GdnfP48540 Rnd1-202ENSMUST00000109149 1034 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
GdnfP48540 Tagln2-201ENSMUST00000111228 716 ntAPPRIS P1 TSL 3 BASIC11.18□□□□□ -0.62
GdnfP48540 Rpl9-203ENSMUST00000120094 680 ntAPPRIS P1 TSL 2 BASIC11.18□□□□□ -0.62
GdnfP48540 Tpd52-206ENSMUST00000121038 849 ntTSL 5 BASIC11.18□□□□□ -0.62
GdnfP48540 Gm15821-201ENSMUST00000121995 1210 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
GdnfP48540 Gm15222-201ENSMUST00000127359 344 ntTSL 3 BASIC11.18□□□□□ -0.62
GdnfP48540 Gm13134-202ENSMUST00000144347 387 ntTSL 2 BASIC11.18□□□□□ -0.62
GdnfP48540 1600025M17Rik-202ENSMUST00000151426 547 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
GdnfP48540 Gm12840-201ENSMUST00000156081 627 ntTSL 5 BASIC11.18□□□□□ -0.62
GdnfP48540 A330069E16Rik-201ENSMUST00000181191 887 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
GdnfP48540 1700030C10Rik-202ENSMUST00000186243 126 ntBASIC11.18□□□□□ -0.62
GdnfP48540 Fcrl1-204ENSMUST00000191666 925 ntAPPRIS ALT2 TSL 1 (best) BASIC11.18□□□□□ -0.62
GdnfP48540 Gm19931-201ENSMUST00000198920 368 ntBASIC11.18□□□□□ -0.62
GdnfP48540 Gm43377-201ENSMUST00000201640 455 ntBASIC11.18□□□□□ -0.62
GdnfP48540 Tdrp-206ENSMUST00000210414 323 ntTSL 3 BASIC11.18□□□□□ -0.62
GdnfP48540 Gm17870-201ENSMUST00000219489 1174 ntBASIC11.18□□□□□ -0.62
GdnfP48540 AC192088.1-201ENSMUST00000227561 301 ntBASIC11.18□□□□□ -0.62
GdnfP48540 Rpl29-201ENSMUST00000059802 710 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
GdnfP48540 Fbxw7-201ENSMUST00000029727 2221 ntAPPRIS P3 TSL 1 (best) BASIC11.18□□□□□ -0.62
GdnfP48540 Nup98-201ENSMUST00000070165 4052 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
GdnfP48540 Tmem115-201ENSMUST00000010189 2194 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
GdnfP48540 Kcnt1-212ENSMUST00000197917 3711 ntAPPRIS ALT2 TSL 5 BASIC11.18□□□□□ -0.62
GdnfP48540 Cisd2-201ENSMUST00000029815 3361 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
GdnfP48540 Tmem269-202ENSMUST00000212054 1504 ntAPPRIS P2 TSL 1 (best) BASIC11.18□□□□□ -0.62
GdnfP48540 Mast1-201ENSMUST00000109741 4872 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
GdnfP48540 Trmt1-203ENSMUST00000109767 2138 ntAPPRIS P3 TSL 1 (best) BASIC11.18□□□□□ -0.62
GdnfP48540 Tfdp2-205ENSMUST00000179416 2408 ntAPPRIS P3 TSL 1 (best) BASIC11.18□□□□□ -0.62
GdnfP48540 Gtf2ird1-202ENSMUST00000074114 3330 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
GdnfP48540 Zbtb49-201ENSMUST00000094833 2978 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
GdnfP48540 Rbm11-203ENSMUST00000114253 2699 ntAPPRIS P2 TSL 1 (best) BASIC11.18□□□□□ -0.62
GdnfP48540 Irf1-203ENSMUST00000108922 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC11.18□□□□□ -0.62
GdnfP48540 Sun2-201ENSMUST00000046259 3804 ntAPPRIS ALT2 TSL 1 (best) BASIC11.18□□□□□ -0.62
GdnfP48540 Psmd9-201ENSMUST00000100729 2597 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
GdnfP48540 Apol7a-201ENSMUST00000010745 1431 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
GdnfP48540 Eci2-211ENSMUST00000171229 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC11.18□□□□□ -0.62
GdnfP48540 Gm37014-201ENSMUST00000194723 2253 ntBASIC11.18□□□□□ -0.62
GdnfP48540 Uchl1os-201ENSMUST00000152002 1685 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
GdnfP48540 Nxf1-211ENSMUST00000184970 5591 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
GdnfP48540 Tns2-201ENSMUST00000046144 4718 ntAPPRIS ALT2 TSL 5 BASIC11.17□□□□□ -0.62
GdnfP48540 Gpr19-208ENSMUST00000165392 1643 ntTSL 3 BASIC11.17□□□□□ -0.62
GdnfP48540 Gpr19-202ENSMUST00000066107 1647 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
GdnfP48540 Specc1-213ENSMUST00000202179 6676 ntAPPRIS ALT2 TSL 1 (best) BASIC11.17□□□□□ -0.62
GdnfP48540 Kank4-201ENSMUST00000102790 4795 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
GdnfP48540 Dusp13-202ENSMUST00000119866 1342 ntTSL 5 BASIC11.17□□□□□ -0.62
GdnfP48540 Camk2d-216ENSMUST00000163226 4204 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
GdnfP48540 Nemp1-203ENSMUST00000118728 2362 ntAPPRIS ALT2 TSL 1 (best) BASIC11.17□□□□□ -0.62
GdnfP48540 Samd5-201ENSMUST00000100070 6818 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
GdnfP48540 Clpb-201ENSMUST00000001884 4627 ntAPPRIS P2 TSL 1 (best) BASIC11.17□□□□□ -0.62
GdnfP48540 Gm12416-201ENSMUST00000120911 1008 ntBASIC11.17□□□□□ -0.62
GdnfP48540 Rab15-204ENSMUST00000122419 856 ntTSL 5 BASIC11.17□□□□□ -0.62
GdnfP48540 1700121C08Rik-201ENSMUST00000137546 677 ntTSL 3 BASIC11.17□□□□□ -0.62
GdnfP48540 Gm15945-201ENSMUST00000146755 810 ntTSL 3 BASIC11.17□□□□□ -0.62
GdnfP48540 Plekhd1os-201ENSMUST00000153297 944 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
GdnfP48540 Vmn1r-ps10-201ENSMUST00000176165 889 ntBASIC11.17□□□□□ -0.62
GdnfP48540 Trp53tg5-201ENSMUST00000017864 934 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
GdnfP48540 Mir6392-201ENSMUST00000184924 108 ntBASIC11.17□□□□□ -0.62
GdnfP48540 Gm7558-201ENSMUST00000193221 1165 ntBASIC11.17□□□□□ -0.62
GdnfP48540 Smyd3-207ENSMUST00000194237 1047 ntTSL 2 BASIC11.17□□□□□ -0.62
GdnfP48540 Gm34866-201ENSMUST00000196146 515 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
GdnfP48540 Gm35082-201ENSMUST00000207308 338 ntTSL 3 BASIC11.17□□□□□ -0.62
GdnfP48540 Ccdc159-204ENSMUST00000216710 1126 ntAPPRIS ALT2 TSL 5 BASIC11.17□□□□□ -0.62
GdnfP48540 Hilpda-201ENSMUST00000054445 982 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
GdnfP48540 Zmat5-201ENSMUST00000009220 792 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
GdnfP48540 Sv2a-201ENSMUST00000035371 4334 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
GdnfP48540 Kcnq1-202ENSMUST00000185383 1535 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
GdnfP48540 Map3k4-201ENSMUST00000089058 5305 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
GdnfP48540 Rxfp3-201ENSMUST00000058007 4275 ntAPPRIS P1 BASIC11.17□□□□□ -0.62
GdnfP48540 Tmc8-204ENSMUST00000119455 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC11.17□□□□□ -0.62
GdnfP48540 Abca7-202ENSMUST00000132517 6696 ntAPPRIS P3 TSL 5 BASIC11.17□□□□□ -0.62
GdnfP48540 AC157950.1-201ENSMUST00000217561 2168 ntBASIC11.17□□□□□ -0.62
GdnfP48540 Asap1-201ENSMUST00000023008 4580 ntAPPRIS ALT2 TSL 5 BASIC11.17□□□□□ -0.62
GdnfP48540 Reep2-201ENSMUST00000043484 1926 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
GdnfP48540 Dpysl5-201ENSMUST00000088081 5022 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
GdnfP48540 Rnf43-203ENSMUST00000121782 2640 ntTSL 5 BASIC11.17□□□□□ -0.62
GdnfP48540 Mrvi1-201ENSMUST00000005751 6198 ntAPPRIS P3 TSL 1 (best) BASIC11.17□□□□□ -0.62
GdnfP48540 Tmem254a-204ENSMUST00000185006 2147 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
GdnfP48540 Prdx2-203ENSMUST00000109734 1612 ntAPPRIS P1 TSL 2 BASIC11.17□□□□□ -0.62
Retrieved 100 of 76,532 protein–RNA pairs in 154.9 ms