Protein–RNA interactions for Protein: P48437

Prox1, Prospero homeobox protein 1, mousemouse

Predictions only

Length 737 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prox1P48437 Gm20445-201ENSMUST00000061905 565 ntBASIC12.25□□□□□ -0.45
Prox1P48437 Arrdc5-201ENSMUST00000097303 1054 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Prox1P48437 Col8a1-201ENSMUST00000089332 5108 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Prox1P48437 Rps7-ps2-201ENSMUST00000219719 1347 ntBASIC12.25□□□□□ -0.45
Prox1P48437 Vill-203ENSMUST00000126251 1411 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Prox1P48437 D830024N08Rik-201ENSMUST00000212132 2899 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Prox1P48437 Cyp2ab1-205ENSMUST00000182741 1497 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
Prox1P48437 Me3-202ENSMUST00000032856 4485 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Prox1P48437 Gnb4-205ENSMUST00000155737 5997 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Prox1P48437 Cd72-201ENSMUST00000030179 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Prox1P48437 Cchcr1-205ENSMUST00000173903 3054 ntAPPRIS ALT2 TSL 5 BASIC12.25□□□□□ -0.45
Prox1P48437 Igsf5-202ENSMUST00000081093 1554 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Prox1P48437 Hoxd10-201ENSMUST00000061745 1816 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Prox1P48437 Cyth2-208ENSMUST00000211783 1983 ntTSL 5 BASIC12.25□□□□□ -0.45
Prox1P48437 Gm43365-201ENSMUST00000196522 2106 ntBASIC12.25□□□□□ -0.45
Prox1P48437 Rxfp3-201ENSMUST00000058007 4275 ntAPPRIS P1 BASIC12.25□□□□□ -0.45
Prox1P48437 Ush1c-209ENSMUST00000222454 2580 ntAPPRIS ALT2 TSL 5 BASIC12.25□□□□□ -0.45
Prox1P48437 Gja5-203ENSMUST00000199597 3668 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Prox1P48437 Nudt8-201ENSMUST00000155405 3904 ntAPPRIS P1 TSL 2 BASIC12.24□□□□□ -0.45
Prox1P48437 Asap3-201ENSMUST00000047526 4225 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Prox1P48437 Baiap3-202ENSMUST00000182056 4645 ntAPPRIS P2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Prox1P48437 Clspn-201ENSMUST00000048391 5027 ntAPPRIS P2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Prox1P48437 Gpr26-201ENSMUST00000045840 11571 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Prox1P48437 Mlx-202ENSMUST00000107302 1826 ntAPPRIS ALT1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Prox1P48437 Gtf2ird1-207ENSMUST00000111245 3299 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Prox1P48437 Eng-202ENSMUST00000113272 3021 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Prox1P48437 Snap47-202ENSMUST00000120940 1192 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Prox1P48437 C430049B03Rik-201ENSMUST00000129764 868 ntTSL 3 BASIC12.24□□□□□ -0.45
Prox1P48437 Amotl2-211ENSMUST00000153965 4222 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Prox1P48437 Kcnab2-203ENSMUST00000159186 1552 ntTSL 5 BASIC12.24□□□□□ -0.45
Prox1P48437 Tac2-202ENSMUST00000179960 852 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Prox1P48437 Gm26854-201ENSMUST00000180418 705 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Prox1P48437 1110046J04Rik-202ENSMUST00000180906 2776 ntBASIC12.24□□□□□ -0.45
Prox1P48437 Gm15294-202ENSMUST00000182079 366 ntAPPRIS P1 BASIC12.24□□□□□ -0.45
Prox1P48437 Gm5745-201ENSMUST00000183748 313 ntBASIC12.24□□□□□ -0.45
Prox1P48437 Gm34866-201ENSMUST00000196146 515 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Prox1P48437 Gm5279-201ENSMUST00000199575 745 ntBASIC12.24□□□□□ -0.45
Prox1P48437 Lat2-205ENSMUST00000200998 1481 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Prox1P48437 Gm8798-201ENSMUST00000211877 1661 ntBASIC12.24□□□□□ -0.45
Prox1P48437 Gm32926-202ENSMUST00000215162 1176 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Prox1P48437 4933412E12Rik-201ENSMUST00000217853 1698 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Prox1P48437 Tac2-201ENSMUST00000026466 678 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Prox1P48437 Psmc3-202ENSMUST00000067663 1636 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Prox1P48437 Gm10604-201ENSMUST00000098260 1706 ntAPPRIS P1 BASIC12.24□□□□□ -0.45
Prox1P48437 Myo7a-203ENSMUST00000107127 6806 ntAPPRIS P3 TSL 5 BASIC12.24□□□□□ -0.45
Prox1P48437 Pdik1l-201ENSMUST00000061234 4686 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Prox1P48437 Clpb-211ENSMUST00000209579 4159 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Prox1P48437 Evi5l-208ENSMUST00000176825 3728 ntAPPRIS ALT2 TSL 5 BASIC12.24□□□□□ -0.45
Prox1P48437 Hkdc1-201ENSMUST00000020277 3517 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Prox1P48437 Ttc34-201ENSMUST00000050220 3200 ntAPPRIS P2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Prox1P48437 Lcmt2-202ENSMUST00000110674 3056 ntAPPRIS P1 BASIC12.24□□□□□ -0.45
Prox1P48437 Crmp1-201ENSMUST00000031004 2906 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Prox1P48437 Tmc8-204ENSMUST00000119455 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Prox1P48437 Trpv4-204ENSMUST00000112222 2475 ntTSL 5 BASIC12.23□□□□□ -0.45
Prox1P48437 Npepps-215ENSMUST00000167806 2307 ntTSL 5 BASIC12.23□□□□□ -0.45
Prox1P48437 Rph3al-204ENSMUST00000121287 2199 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
Prox1P48437 Slc34a3-201ENSMUST00000006638 2183 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Prox1P48437 Trim25-203ENSMUST00000107896 5590 ntAPPRIS P2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Prox1P48437 Usp53-202ENSMUST00000197314 3586 ntTSL 5 BASIC12.23□□□□□ -0.45
Prox1P48437 Adipor2-202ENSMUST00000169744 3489 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Prox1P48437 Wdr59-202ENSMUST00000038193 5083 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Prox1P48437 Adora1-202ENSMUST00000086465 4968 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Prox1P48437 Arid5a-204ENSMUST00000115032 4640 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
Prox1P48437 Tmem269-202ENSMUST00000212054 1504 ntAPPRIS P2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Prox1P48437 Psd2-205ENSMUST00000176873 4375 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Prox1P48437 Vdr-201ENSMUST00000023119 4370 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Prox1P48437 Slc6a20a-201ENSMUST00000040960 2732 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Prox1P48437 Trim46-202ENSMUST00000090924 2721 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Prox1P48437 Gfap-201ENSMUST00000067444 2648 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Prox1P48437 Gm11524-201ENSMUST00000119349 807 ntBASIC12.23□□□□□ -0.45
Prox1P48437 Ndufv3-205ENSMUST00000191598 642 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Prox1P48437 Bet1l-209ENSMUST00000211624 769 ntTSL 3 BASIC12.23□□□□□ -0.45
Prox1P48437 AC147241.1-201ENSMUST00000222173 785 ntTSL 3 BASIC12.23□□□□□ -0.45
Prox1P48437 Olfr1412-201ENSMUST00000062964 966 ntAPPRIS P1 BASIC12.23□□□□□ -0.45
Prox1P48437 Med8-202ENSMUST00000073881 1052 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Prox1P48437 Lingo4-201ENSMUST00000050975 3645 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Prox1P48437 Clec10a-209ENSMUST00000178945 2332 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Prox1P48437 Nfe2l1-211ENSMUST00000167149 4596 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
Prox1P48437 Cacna1g-210ENSMUST00000107792 7981 ntAPPRIS ALT2 TSL 5 BASIC12.23□□□□□ -0.45
Prox1P48437 Gm5608-201ENSMUST00000210253 2290 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Prox1P48437 3110062M04Rik-203ENSMUST00000115007 3326 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
Prox1P48437 Urm1-201ENSMUST00000091142 2196 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Prox1P48437 Myocd-201ENSMUST00000101042 2585 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Prox1P48437 Grm7-202ENSMUST00000172951 4197 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
Prox1P48437 Tfcp2-201ENSMUST00000009877 3250 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Prox1P48437 Nup98-201ENSMUST00000070165 4052 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Prox1P48437 Sec16a-202ENSMUST00000114082 8797 ntAPPRIS ALT2 TSL 5 BASIC12.22□□□□□ -0.45
Prox1P48437 BC003331-203ENSMUST00000097546 3174 ntAPPRIS ALT2 TSL 5 BASIC12.22□□□□□ -0.45
Prox1P48437 Cpa1-201ENSMUST00000031806 1583 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Prox1P48437 Cdk13-207ENSMUST00000223490 12548 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Prox1P48437 Slc24a4-201ENSMUST00000079020 2337 ntAPPRIS P2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Prox1P48437 Ate1-204ENSMUST00000178534 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Prox1P48437 Tekt2-201ENSMUST00000030658 1492 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Prox1P48437 Tmem254a-204ENSMUST00000185006 2147 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Prox1P48437 Gipc3-201ENSMUST00000045102 3521 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Prox1P48437 Wdyhv1-201ENSMUST00000067563 1383 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Prox1P48437 Wdr45-223ENSMUST00000207675 1335 ntTSL 5 BASIC12.22□□□□□ -0.45
Prox1P48437 Ttll12-201ENSMUST00000016901 3220 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Prox1P48437 Fam161a-203ENSMUST00000109557 1947 ntAPPRIS P1 TSL 2 BASIC12.22□□□□□ -0.45
Prox1P48437 Zfp108-201ENSMUST00000072713 1929 ntAPPRIS ALT2 TSL 5 BASIC12.22□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 48.5 ms