Protein–RNA interactions for Protein: P48298

Ccl11, Eotaxin, mousemouse

Predictions only

Length 97 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccl11P48298 Gm28379-201ENSMUST00000186450 554 ntTSL 5 BASIC10.78□□□□□ -0.68
Ccl11P48298 Pcbd1-201ENSMUST00000020298 789 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Ccl11P48298 Gm30459-201ENSMUST00000206203 1193 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Ccl11P48298 Gm18056-201ENSMUST00000207670 568 ntBASIC10.78□□□□□ -0.68
Ccl11P48298 Gm18061-201ENSMUST00000208350 562 ntBASIC10.78□□□□□ -0.68
Ccl11P48298 Gm18063-201ENSMUST00000208529 568 ntBASIC10.78□□□□□ -0.68
Ccl11P48298 Gm18052-201ENSMUST00000208750 559 ntBASIC10.78□□□□□ -0.68
Ccl11P48298 4933421D24Rik-201ENSMUST00000209302 1286 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Ccl11P48298 Ldha-213ENSMUST00000210631 685 ntTSL 5 BASIC10.78□□□□□ -0.68
Ccl11P48298 Aprt-203ENSMUST00000211823 590 ntTSL 3 BASIC10.78□□□□□ -0.68
Ccl11P48298 Gm5950-201ENSMUST00000213337 772 ntBASIC10.78□□□□□ -0.68
Ccl11P48298 AC093022.1-201ENSMUST00000226949 1072 ntBASIC10.78□□□□□ -0.68
Ccl11P48298 AC108416.1-202ENSMUST00000228927 1201 ntBASIC10.78□□□□□ -0.68
Ccl11P48298 Trex2-201ENSMUST00000033738 1017 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Ccl11P48298 Hsd3b7-201ENSMUST00000046863 1828 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Ccl11P48298 Oraov1-201ENSMUST00000033388 2015 ntAPPRIS P3 TSL 1 (best) BASIC10.78□□□□□ -0.68
Ccl11P48298 Plcb1-202ENSMUST00000110116 7003 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Ccl11P48298 Pcdha2-202ENSMUST00000195590 4645 ntAPPRIS ALT2 TSL 1 (best) BASIC10.78□□□□□ -0.68
Ccl11P48298 Kansl3-205ENSMUST00000186470 2801 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Ccl11P48298 Elp4-202ENSMUST00000122965 3048 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Ccl11P48298 Hrg-201ENSMUST00000023590 1734 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Ccl11P48298 Tcn2-204ENSMUST00000109990 1914 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Ccl11P48298 Igha-202ENSMUST00000194738 2540 ntAPPRIS P5 BASIC10.78□□□□□ -0.68
Ccl11P48298 Pbxip1-201ENSMUST00000038942 4479 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Ccl11P48298 Arl4a-205ENSMUST00000146905 3710 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Ccl11P48298 Tjap1-202ENSMUST00000164342 2559 ntAPPRIS P2 TSL 1 (best) BASIC10.77□□□□□ -0.68
Ccl11P48298 Hspa4-201ENSMUST00000020630 4618 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.68
Ccl11P48298 Spg7-202ENSMUST00000125975 2408 ntAPPRIS ALT2 TSL 5 BASIC10.77□□□□□ -0.68
Ccl11P48298 Adtrp-202ENSMUST00000121404 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC10.77□□□□□ -0.68
Ccl11P48298 Gm13293-201ENSMUST00000131188 1615 ntTSL 1 (best) BASIC10.77□□□□□ -0.68
Ccl11P48298 AC167669.2-201ENSMUST00000224417 1620 ntBASIC10.77□□□□□ -0.68
Ccl11P48298 Gm44207-201ENSMUST00000204568 1424 ntBASIC10.77□□□□□ -0.68
Ccl11P48298 Pold3-201ENSMUST00000032969 3069 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.68
Ccl11P48298 Polrmt-202ENSMUST00000159016 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC10.77□□□□□ -0.69
Ccl11P48298 Zfp367-201ENSMUST00000059817 3532 ntAPPRIS P2 TSL 1 (best) BASIC10.77□□□□□ -0.69
Ccl11P48298 Ubqln2-201ENSMUST00000060714 3344 ntAPPRIS P1 BASIC10.77□□□□□ -0.69
Ccl11P48298 Trappc9-203ENSMUST00000168191 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC10.77□□□□□ -0.69
Ccl11P48298 Txndc2-201ENSMUST00000050236 1899 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Ccl11P48298 Wdr36-202ENSMUST00000166214 2942 ntAPPRIS ALT2 TSL 1 (best) BASIC10.77□□□□□ -0.69
Ccl11P48298 Trappc2l-201ENSMUST00000015157 1659 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Ccl11P48298 Bscl2-203ENSMUST00000159634 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC10.77□□□□□ -0.69
Ccl11P48298 Runx1t1-204ENSMUST00000105566 6090 ntAPPRIS ALT1 TSL 5 BASIC10.77□□□□□ -0.69
Ccl11P48298 Jrk-201ENSMUST00000050234 5853 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Ccl11P48298 Tnnt3-217ENSMUST00000105957 1028 ntAPPRIS ALT2 TSL 5 BASIC10.77□□□□□ -0.69
Ccl11P48298 R3hdml-201ENSMUST00000109416 1094 ntAPPRIS P1 TSL 5 BASIC10.77□□□□□ -0.69
Ccl11P48298 Tpm1-207ENSMUST00000113687 962 ntTSL 5 BASIC10.77□□□□□ -0.69
Ccl11P48298 Gm13875-201ENSMUST00000120162 282 ntBASIC10.77□□□□□ -0.69
Ccl11P48298 Gm13813-201ENSMUST00000120998 787 ntBASIC10.77□□□□□ -0.69
Ccl11P48298 Gm12749-201ENSMUST00000122138 1159 ntBASIC10.77□□□□□ -0.69
Ccl11P48298 Gm15869-201ENSMUST00000126427 734 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
Ccl11P48298 Dlx1as-202ENSMUST00000137251 647 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
Ccl11P48298 Gm15479-201ENSMUST00000139309 1133 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
Ccl11P48298 Gm38979-201ENSMUST00000207099 698 ntTSL 3 BASIC10.77□□□□□ -0.69
Ccl11P48298 Gm9176-201ENSMUST00000219955 1120 ntBASIC10.77□□□□□ -0.69
Ccl11P48298 Lsm7-201ENSMUST00000035775 468 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Ccl11P48298 Lgals12-202ENSMUST00000099729 2757 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Ccl11P48298 Engase-202ENSMUST00000135383 4064 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Ccl11P48298 Eef1e1-201ENSMUST00000001757 2553 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Ccl11P48298 Atg2b-201ENSMUST00000041055 7546 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Ccl11P48298 Bicd1-202ENSMUST00000086829 9667 ntAPPRIS P2 TSL 1 (best) BASIC10.77□□□□□ -0.69
Ccl11P48298 Stx18-203ENSMUST00000114126 3002 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Ccl11P48298 Kif13b-201ENSMUST00000100473 5603 ntAPPRIS P2 TSL 5 BASIC10.77□□□□□ -0.69
Ccl11P48298 Synpo-209ENSMUST00000143275 5040 ntAPPRIS ALT2 TSL 5 BASIC10.77□□□□□ -0.69
Ccl11P48298 Pfkfb3-220ENSMUST00000192949 4801 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
Ccl11P48298 Mrps35-201ENSMUST00000036111 4162 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Ccl11P48298 Zfp207-201ENSMUST00000017567 2245 ntAPPRIS ALT1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Ccl11P48298 Mynn-202ENSMUST00000192715 5555 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Ccl11P48298 Il1rn-204ENSMUST00000114487 2474 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
Ccl11P48298 Kif1a-210ENSMUST00000190723 6141 ntTSL 5 BASIC10.77□□□□□ -0.69
Ccl11P48298 Asap1-201ENSMUST00000023008 4580 ntAPPRIS ALT2 TSL 5 BASIC10.77□□□□□ -0.69
Ccl11P48298 Prickle1-202ENSMUST00000109255 4144 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Ccl11P48298 Olfr322-202ENSMUST00000213232 4632 ntAPPRIS P1 TSL 5 BASIC10.77□□□□□ -0.69
Ccl11P48298 4632404H12Rik-201ENSMUST00000038450 2791 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
Ccl11P48298 Sp3-202ENSMUST00000102689 4181 ntAPPRIS P2 TSL 1 (best) BASIC10.77□□□□□ -0.69
Ccl11P48298 Gm37737-201ENSMUST00000195013 1638 ntBASIC10.76□□□□□ -0.69
Ccl11P48298 Loxl2-202ENSMUST00000100420 3042 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Ccl11P48298 Ccrl2-203ENSMUST00000199839 1864 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Ccl11P48298 Mtmr2-201ENSMUST00000034396 3788 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Ccl11P48298 Zfp429-202ENSMUST00000181071 2117 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Ccl11P48298 Magi1-206ENSMUST00000203688 4969 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Ccl11P48298 4930550C17Rik-201ENSMUST00000181629 1411 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Ccl11P48298 Reps2-201ENSMUST00000101102 7630 ntAPPRIS P3 TSL 1 (best) BASIC10.76□□□□□ -0.69
Ccl11P48298 Mier3-203ENSMUST00000109272 5279 ntAPPRIS P2 TSL 1 (best) BASIC10.76□□□□□ -0.69
Ccl11P48298 Acadl-201ENSMUST00000027153 1916 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Ccl11P48298 Ptch2-201ENSMUST00000030443 4382 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Ccl11P48298 Ncoa7-201ENSMUST00000068567 5105 ntAPPRIS P3 TSL 5 BASIC10.76□□□□□ -0.69
Ccl11P48298 Rhot1-204ENSMUST00000092857 3687 ntAPPRIS P3 TSL 1 (best) BASIC10.76□□□□□ -0.69
Ccl11P48298 1110034G24Rik-202ENSMUST00000110132 1471 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Ccl11P48298 Tmub1-203ENSMUST00000115036 1455 ntTSL 5 BASIC10.76□□□□□ -0.69
Ccl11P48298 Ticrr-201ENSMUST00000035977 7199 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Ccl11P48298 Sfpq-201ENSMUST00000030623 3465 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Ccl11P48298 CT010488.1-201ENSMUST00000214890 1522 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Ccl11P48298 Suclg1-201ENSMUST00000064740 1519 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Ccl11P48298 Gm12058-201ENSMUST00000118614 437 ntBASIC10.76□□□□□ -0.69
Ccl11P48298 Acyp1-204ENSMUST00000121930 634 ntTSL 2 BASIC10.76□□□□□ -0.69
Ccl11P48298 Pdlim2-205ENSMUST00000129174 729 ntTSL 2 BASIC10.76□□□□□ -0.69
Ccl11P48298 Gm14019-201ENSMUST00000131514 403 ntTSL 3 BASIC10.76□□□□□ -0.69
Ccl11P48298 C230066G23Rik-201ENSMUST00000150195 650 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Ccl11P48298 Lage3-201ENSMUST00000015433 761 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Ccl11P48298 6430590A07Rik-201ENSMUST00000181813 1032 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Retrieved 100 of 76,532 protein–RNA pairs in 63.3 ms