Protein–RNA interactions for Protein: P46467

Vps4b, Vacuolar protein sorting-associated protein 4B, mousemouse

Known RBP Predictions only

Length 444 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps4bP46467 Nin-204ENSMUST00000169074 6636 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Vps4bP46467 Phactr2-201ENSMUST00000079698 1934 ntAPPRIS ALT2 TSL 5 BASIC12.93□□□□□ -0.34
Vps4bP46467 Rtn4-203ENSMUST00000102841 4060 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Vps4bP46467 Gprc5a-201ENSMUST00000050104 2083 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Vps4bP46467 Pir-201ENSMUST00000033749 1599 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Vps4bP46467 Cnn1-201ENSMUST00000001384 2381 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Vps4bP46467 Ak4-202ENSMUST00000106945 4175 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Vps4bP46467 Gm26905-201ENSMUST00000180798 6621 ntTSL 5 BASIC12.93□□□□□ -0.34
Vps4bP46467 Eif4enif1-213ENSMUST00000179770 3676 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Vps4bP46467 Gm37269-201ENSMUST00000193906 1891 ntBASIC12.93□□□□□ -0.34
Vps4bP46467 Gm14123-201ENSMUST00000156345 2658 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Vps4bP46467 Wdr25-202ENSMUST00000167816 2657 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
Vps4bP46467 Atp6v1h-201ENSMUST00000044369 2049 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Vps4bP46467 Lrrfip1-202ENSMUST00000068167 2849 ntAPPRIS ALT2 TSL 5 BASIC12.93□□□□□ -0.34
Vps4bP46467 Nxf1-201ENSMUST00000010241 2326 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Vps4bP46467 Npepps-215ENSMUST00000167806 2307 ntTSL 5 BASIC12.93□□□□□ -0.34
Vps4bP46467 Pygo1-201ENSMUST00000038489 7916 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Vps4bP46467 Camta2-202ENSMUST00000100933 4383 ntAPPRIS ALT2 TSL 5 BASIC12.92□□□□□ -0.34
Vps4bP46467 Camta2-204ENSMUST00000108545 4377 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Vps4bP46467 Camta2-206ENSMUST00000120261 4398 ntTSL 5 BASIC12.92□□□□□ -0.34
Vps4bP46467 Sf1-208ENSMUST00000131252 4353 ntAPPRIS P4 TSL 1 (best) BASIC12.92□□□□□ -0.34
Vps4bP46467 Gsn-205ENSMUST00000201185 2607 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Vps4bP46467 Th-201ENSMUST00000000219 1829 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Vps4bP46467 Chpf2-202ENSMUST00000121863 3715 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
Vps4bP46467 Pik3cd-206ENSMUST00000122059 4832 ntAPPRIS ALT1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Vps4bP46467 Cdk7-201ENSMUST00000091299 1988 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Vps4bP46467 Ccng1-201ENSMUST00000020576 3512 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Vps4bP46467 Mylk-201ENSMUST00000023538 7824 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Vps4bP46467 Serpinb12-202ENSMUST00000112724 1623 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Vps4bP46467 CT573086.2-201ENSMUST00000227277 4992 ntBASIC12.92□□□□□ -0.34
Vps4bP46467 Calcoco1-201ENSMUST00000023818 2822 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Vps4bP46467 Crybg3-201ENSMUST00000044604 5231 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Vps4bP46467 Pbrm1-206ENSMUST00000112094 5154 ntAPPRIS P5 TSL 5 BASIC12.92□□□□□ -0.34
Vps4bP46467 Gm8213-201ENSMUST00000118191 441 ntBASIC12.92□□□□□ -0.34
Vps4bP46467 Rgs11-202ENSMUST00000122058 2005 ntAPPRIS ALT2 TSL 2 BASIC12.92□□□□□ -0.34
Vps4bP46467 P2rx4-204ENSMUST00000139631 1030 ntTSL 5 BASIC12.92□□□□□ -0.34
Vps4bP46467 P2rx4-206ENSMUST00000142664 1111 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Vps4bP46467 Mmgt2-207ENSMUST00000155759 589 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Vps4bP46467 Gm27892-201ENSMUST00000185017 106 ntBASIC12.92□□□□□ -0.34
Vps4bP46467 4933417C20Rik-201ENSMUST00000193962 1874 ntBASIC12.92□□□□□ -0.34
Vps4bP46467 Zfp936-202ENSMUST00000200973 578 ntTSL 3 BASIC12.92□□□□□ -0.34
Vps4bP46467 Gm43416-201ENSMUST00000201916 1015 ntBASIC12.92□□□□□ -0.34
Vps4bP46467 Gm45564-201ENSMUST00000210460 530 ntTSL 5 BASIC12.92□□□□□ -0.34
Vps4bP46467 Kitl-204ENSMUST00000218200 564 ntTSL 5 BASIC12.92□□□□□ -0.34
Vps4bP46467 Tk1-201ENSMUST00000026661 1440 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Vps4bP46467 Emc4-201ENSMUST00000028551 983 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Vps4bP46467 1700123K08Rik-201ENSMUST00000031501 1047 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Vps4bP46467 Cox19-201ENSMUST00000049630 2461 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Vps4bP46467 Otos-201ENSMUST00000053144 704 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Vps4bP46467 Cd200r1-201ENSMUST00000057488 1892 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Vps4bP46467 Cd1d1-202ENSMUST00000063869 1421 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Vps4bP46467 Gm10578-202ENSMUST00000211070 2876 ntTSL 2 BASIC12.92□□□□□ -0.34
Vps4bP46467 Dcaf1-202ENSMUST00000159645 4945 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Vps4bP46467 Zp1-201ENSMUST00000025641 1963 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Vps4bP46467 Fn1-213ENSMUST00000188674 7680 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Vps4bP46467 Fn1-217ENSMUST00000190780 7694 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Vps4bP46467 1110002L01Rik-202ENSMUST00000168012 3569 ntTSL 2 BASIC12.92□□□□□ -0.34
Vps4bP46467 Slc25a25-205ENSMUST00000113310 3278 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Vps4bP46467 Duoxa1-202ENSMUST00000110537 1506 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Vps4bP46467 Igf2-204ENSMUST00000105936 3970 ntAPPRIS P1 TSL 2 BASIC12.92□□□□□ -0.34
Vps4bP46467 Kdm2a-201ENSMUST00000047898 8578 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Vps4bP46467 Prex1-203ENSMUST00000109246 2386 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Vps4bP46467 Naga-201ENSMUST00000023088 1913 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Vps4bP46467 Marco-201ENSMUST00000027639 1925 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Vps4bP46467 Prkar1b-203ENSMUST00000110890 2626 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Vps4bP46467 Rab11fip3-203ENSMUST00000122103 5015 ntAPPRIS P4 TSL 1 (best) BASIC12.91□□□□□ -0.34
Vps4bP46467 Gdap1l1-202ENSMUST00000109420 2475 ntAPPRIS P2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Vps4bP46467 Hspa9-201ENSMUST00000025217 3049 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Vps4bP46467 Trim29-201ENSMUST00000034511 2735 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Vps4bP46467 Tcf25-201ENSMUST00000057934 2738 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
Vps4bP46467 Ccng2-202ENSMUST00000121127 2570 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Vps4bP46467 Epm2aip1-201ENSMUST00000060711 7149 ntAPPRIS P1 BASIC12.91□□□□□ -0.34
Vps4bP46467 Slc29a1-209ENSMUST00000166119 1598 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.34
Vps4bP46467 Galntl6-208ENSMUST00000204128 5680 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
Vps4bP46467 Slc30a3-206ENSMUST00000202740 1989 ntTSL 5 BASIC12.91□□□□□ -0.34
Vps4bP46467 Fmo1-201ENSMUST00000046049 2388 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Vps4bP46467 Sirt2-202ENSMUST00000122915 1828 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Vps4bP46467 March7-203ENSMUST00000102748 3594 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Vps4bP46467 Pdp1-205ENSMUST00000108301 2635 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Vps4bP46467 Mir692-1-201ENSMUST00000102263 109 ntBASIC12.91□□□□□ -0.34
Vps4bP46467 Gm17232-201ENSMUST00000164515 453 ntTSL 2 BASIC12.91□□□□□ -0.34
Vps4bP46467 Mad2l1bp-201ENSMUST00000171172 1269 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Vps4bP46467 Sox2ot-216ENSMUST00000200092 767 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Vps4bP46467 Gm7287-201ENSMUST00000205267 602 ntBASIC12.91□□□□□ -0.34
Vps4bP46467 AC150560.1-201ENSMUST00000227731 1187 ntBASIC12.91□□□□□ -0.34
Vps4bP46467 Atp5d-201ENSMUST00000003156 931 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Vps4bP46467 Csrp3-201ENSMUST00000032658 877 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Vps4bP46467 Cracr2a-201ENSMUST00000071563 1094 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Vps4bP46467 Mir339-201ENSMUST00000083659 96 ntBASIC12.91□□□□□ -0.34
Vps4bP46467 Irak1-203ENSMUST00000101458 2052 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.34
Vps4bP46467 Rap1gds1-202ENSMUST00000098574 3669 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
Vps4bP46467 Col14a1-202ENSMUST00000110217 6457 ntAPPRIS ALT1 TSL 5 BASIC12.91□□□□□ -0.34
Vps4bP46467 Mcf2l-203ENSMUST00000110866 5108 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Vps4bP46467 Spock1-206ENSMUST00000189373 3128 ntTSL 5 BASIC12.91□□□□□ -0.34
Vps4bP46467 Slco3a1-202ENSMUST00000098371 2709 ntAPPRIS ALT1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Vps4bP46467 Slc35e2-202ENSMUST00000105608 6291 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
Vps4bP46467 Abra-201ENSMUST00000054742 1762 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Vps4bP46467 Rbm39-203ENSMUST00000109587 2810 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
Vps4bP46467 Cramp1l-201ENSMUST00000073337 7517 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Vps4bP46467 Pik3r1-202ENSMUST00000055518 7113 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 32.5 ms