Protein–RNA interactions for Protein: P43488

Tnfsf4, Tumor necrosis factor ligand superfamily member 4, mousemouse

Predictions only

Length 198 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfsf4P43488 Rasgef1a-202ENSMUST00000203482 2227 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.44
Tnfsf4P43488 A630014C17Rik-201ENSMUST00000150973 2984 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
Tnfsf4P43488 Nbeal2-211ENSMUST00000196488 8599 ntAPPRIS ALT2 TSL 5 BASIC12.27□□□□□ -0.44
Tnfsf4P43488 Asxl1-205ENSMUST00000227428 6981 ntAPPRIS ALT2 BASIC12.27□□□□□ -0.44
Tnfsf4P43488 Rara-207ENSMUST00000164748 3129 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Tnfsf4P43488 Pir-201ENSMUST00000033749 1599 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Tnfsf4P43488 Gse1-201ENSMUST00000034279 7127 ntAPPRIS P4 TSL 1 (best) BASIC12.27□□□□□ -0.44
Tnfsf4P43488 Entpd4-206ENSMUST00000184973 3589 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Tnfsf4P43488 Entpd4b-204ENSMUST00000185072 3589 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Tnfsf4P43488 Ncan-201ENSMUST00000002412 7195 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Tnfsf4P43488 Kif2c-201ENSMUST00000065896 2842 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.44
Tnfsf4P43488 Hars2-201ENSMUST00000019287 2002 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
Tnfsf4P43488 Uap1l1-201ENSMUST00000102925 3349 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Tnfsf4P43488 Dennd4b-201ENSMUST00000098914 5423 ntAPPRIS P2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Tnfsf4P43488 Zmat1-202ENSMUST00000113185 3378 ntAPPRIS ALT2 TSL 5 BASIC12.27□□□□□ -0.45
Tnfsf4P43488 Cpsf4l-203ENSMUST00000106617 1123 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Tnfsf4P43488 Mapkapk5-205ENSMUST00000111786 975 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Tnfsf4P43488 Eef1akmt4-201ENSMUST00000115522 1130 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Tnfsf4P43488 Gm13834-201ENSMUST00000123757 137 ntTSL 3 BASIC12.27□□□□□ -0.45
Tnfsf4P43488 Gm16000-201ENSMUST00000146657 447 ntTSL 2 BASIC12.27□□□□□ -0.45
Tnfsf4P43488 Mad2l1bp-201ENSMUST00000171172 1269 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Tnfsf4P43488 Gm17634-201ENSMUST00000181383 1285 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Tnfsf4P43488 2410002F23Rik-214ENSMUST00000186606 748 ntAPPRIS ALT2 TSL 5 BASIC12.27□□□□□ -0.45
Tnfsf4P43488 Gm34086-201ENSMUST00000196486 743 ntTSL 3 BASIC12.27□□□□□ -0.45
Tnfsf4P43488 5330425B07Rik-201ENSMUST00000196714 1027 ntBASIC12.27□□□□□ -0.45
Tnfsf4P43488 Gm8463-201ENSMUST00000208573 613 ntBASIC12.27□□□□□ -0.45
Tnfsf4P43488 AC110091.3-202ENSMUST00000217104 791 ntTSL 5 BASIC12.27□□□□□ -0.45
Tnfsf4P43488 Gm36264-202ENSMUST00000221989 1142 ntTSL 5 BASIC12.27□□□□□ -0.45
Tnfsf4P43488 AC155252.1-201ENSMUST00000226462 1208 ntBASIC12.27□□□□□ -0.45
Tnfsf4P43488 Emc4-201ENSMUST00000028551 983 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Tnfsf4P43488 Spsb2-201ENSMUST00000047760 1213 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Tnfsf4P43488 Pdik1l-201ENSMUST00000061234 4686 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Tnfsf4P43488 Gm2423-201ENSMUST00000074863 733 ntBASIC12.27□□□□□ -0.45
Tnfsf4P43488 H2afv-201ENSMUST00000093346 519 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Tnfsf4P43488 Olfr615-201ENSMUST00000098198 942 ntAPPRIS P1 BASIC12.27□□□□□ -0.45
Tnfsf4P43488 Gm815-201ENSMUST00000099536 610 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Tnfsf4P43488 Hmox2-201ENSMUST00000004172 1730 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Tnfsf4P43488 Catsper4-201ENSMUST00000055892 1725 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Tnfsf4P43488 Gabrg3-201ENSMUST00000068394 1724 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Tnfsf4P43488 S1pr1-201ENSMUST00000055676 3046 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Tnfsf4P43488 Sesn2-201ENSMUST00000030724 3475 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Tnfsf4P43488 Tgfbr2-201ENSMUST00000035014 3476 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Tnfsf4P43488 Col6a3-208ENSMUST00000188587 8285 ntTSL 5 BASIC12.27□□□□□ -0.45
Tnfsf4P43488 Mirg-202ENSMUST00000181543 1300 ntTSL 5 BASIC12.27□□□□□ -0.45
Tnfsf4P43488 Kif5a-201ENSMUST00000099172 6295 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Tnfsf4P43488 Amer2-201ENSMUST00000022561 10506 ntAPPRIS P1 BASIC12.27□□□□□ -0.45
Tnfsf4P43488 Cul9-201ENSMUST00000066026 7818 ntAPPRIS ALT2 TSL 5 BASIC12.27□□□□□ -0.45
Tnfsf4P43488 Ackr4-202ENSMUST00000076147 2389 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Tnfsf4P43488 Shroom1-202ENSMUST00000093114 2886 ntTSL 2 BASIC12.27□□□□□ -0.45
Tnfsf4P43488 Gm37437-201ENSMUST00000194451 1937 ntBASIC12.27□□□□□ -0.45
Tnfsf4P43488 Ppm1b-204ENSMUST00000112307 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Tnfsf4P43488 Zufsp-201ENSMUST00000048222 2991 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Tnfsf4P43488 Trmt1-204ENSMUST00000109768 2044 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Tnfsf4P43488 Ip6k1-201ENSMUST00000035214 4559 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Tnfsf4P43488 Csf1-202ENSMUST00000118593 3058 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Tnfsf4P43488 Krba1-203ENSMUST00000114571 6695 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Tnfsf4P43488 Gm42890-202ENSMUST00000167642 2566 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Tnfsf4P43488 Csrnp2-201ENSMUST00000061457 4126 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Tnfsf4P43488 Gm45684-201ENSMUST00000210244 1571 ntBASIC12.26□□□□□ -0.45
Tnfsf4P43488 Gm2420-201ENSMUST00000119864 2149 ntBASIC12.26□□□□□ -0.45
Tnfsf4P43488 Gm17189-201ENSMUST00000163707 1630 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Tnfsf4P43488 Tnk2-205ENSMUST00000115124 4424 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Tnfsf4P43488 Mgll-201ENSMUST00000089449 3867 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Tnfsf4P43488 Il2rg-201ENSMUST00000033664 1670 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Tnfsf4P43488 Abcg8-203ENSMUST00000171915 2284 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Tnfsf4P43488 Oprd1-201ENSMUST00000056336 4021 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Tnfsf4P43488 Rbak-202ENSMUST00000165318 3480 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Tnfsf4P43488 Cyb561d1-201ENSMUST00000065664 4058 ntAPPRIS ALT1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Tnfsf4P43488 2610037D02Rik-201ENSMUST00000180852 2449 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Tnfsf4P43488 Prkar1b-202ENSMUST00000110889 2457 ntTSL 5 BASIC12.26□□□□□ -0.45
Tnfsf4P43488 Bckdha-201ENSMUST00000071329 1899 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Tnfsf4P43488 L1td1-204ENSMUST00000173659 2547 ntAPPRIS ALT2 TSL 2 BASIC12.26□□□□□ -0.45
Tnfsf4P43488 Ighv5-17-201ENSMUST00000103459 405 ntAPPRIS P1 BASIC12.26□□□□□ -0.45
Tnfsf4P43488 R3hdml-201ENSMUST00000109416 1094 ntAPPRIS P1 TSL 5 BASIC12.26□□□□□ -0.45
Tnfsf4P43488 Ghr-203ENSMUST00000110698 1171 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Tnfsf4P43488 Eogt-202ENSMUST00000113387 701 ntAPPRIS ALT2 TSL 5 BASIC12.26□□□□□ -0.45
Tnfsf4P43488 Mrpl53-201ENSMUST00000113938 695 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Tnfsf4P43488 Rhox2f-201ENSMUST00000115173 799 ntAPPRIS P1 TSL 5 BASIC12.26□□□□□ -0.45
Tnfsf4P43488 P2rx4-204ENSMUST00000139631 1030 ntTSL 5 BASIC12.26□□□□□ -0.45
Tnfsf4P43488 P2rx4-206ENSMUST00000142664 1111 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Tnfsf4P43488 Gstt4-202ENSMUST00000160211 964 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Tnfsf4P43488 Pttg1ip-205ENSMUST00000162429 652 ntAPPRIS ALT2 TSL 2 BASIC12.26□□□□□ -0.45
Tnfsf4P43488 Gm9630-201ENSMUST00000178304 885 ntBASIC12.26□□□□□ -0.45
Tnfsf4P43488 Gm27437-201ENSMUST00000183429 107 ntBASIC12.26□□□□□ -0.45
Tnfsf4P43488 Dnajb6-210ENSMUST00000196528 1018 ntTSL 5 BASIC12.26□□□□□ -0.45
Tnfsf4P43488 4930592C13Rik-201ENSMUST00000196791 661 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Tnfsf4P43488 Gm20646-202ENSMUST00000199521 660 ntTSL 3 BASIC12.26□□□□□ -0.45
Tnfsf4P43488 Blvra-201ENSMUST00000002064 1160 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Tnfsf4P43488 Gm45668-201ENSMUST00000211271 493 ntBASIC12.26□□□□□ -0.45
Tnfsf4P43488 Majin-201ENSMUST00000025699 1239 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Tnfsf4P43488 A730061H03Rik-201ENSMUST00000066106 465 ntAPPRIS P1 BASIC12.26□□□□□ -0.45
Tnfsf4P43488 Gm10188-201ENSMUST00000086544 720 ntAPPRIS P1 BASIC12.26□□□□□ -0.45
Tnfsf4P43488 Gm9530-201ENSMUST00000181160 3281 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Tnfsf4P43488 Ccdc94-201ENSMUST00000086869 1311 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Tnfsf4P43488 Lat2-205ENSMUST00000200998 1481 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Tnfsf4P43488 Sun2-203ENSMUST00000100439 3768 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Tnfsf4P43488 Map3k11-201ENSMUST00000004156 3801 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Tnfsf4P43488 Gtf2ird1-202ENSMUST00000074114 3330 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Tnfsf4P43488 Brinp2-201ENSMUST00000004133 4167 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Tnfsf4P43488 4930423D22Rik-201ENSMUST00000221909 1674 ntBASIC12.26□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 40.6 ms