Protein–RNA interactions for Protein: P42859

Htt, Huntingtin, mousemouse

Predictions only

Length 3,119 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HttP42859 Mrpl30-207ENSMUST00000195373 587 ntAPPRIS P1 TSL 2 BASIC13.13□□□□□ -0.31
HttP42859 Ins2-201ENSMUST00000000220 478 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
HttP42859 Vmn1r44-201ENSMUST00000089420 1108 ntAPPRIS P1 BASIC13.13□□□□□ -0.31
HttP42859 Abcb6-201ENSMUST00000027396 2966 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
HttP42859 AC164107.1-201ENSMUST00000227730 2161 ntBASIC13.13□□□□□ -0.31
HttP42859 Fbxl12-207ENSMUST00000151861 1668 ntTSL 2 BASIC13.13□□□□□ -0.31
HttP42859 Tacr2-201ENSMUST00000020278 2258 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
HttP42859 Dnm2-201ENSMUST00000072362 3502 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
HttP42859 Fam49a-201ENSMUST00000069005 1771 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
HttP42859 Ppp1r1b-206ENSMUST00000150762 1801 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
HttP42859 1200007C13Rik-201ENSMUST00000143649 2455 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
HttP42859 Cd163l1-203ENSMUST00000209398 3437 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
HttP42859 Aamdc-207ENSMUST00000138060 467 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
HttP42859 Pfdn5-203ENSMUST00000165671 830 ntTSL 2 BASIC13.13□□□□□ -0.31
HttP42859 Gm28836-201ENSMUST00000185842 633 ntTSL 2 BASIC13.13□□□□□ -0.31
HttP42859 Gm39397-201ENSMUST00000212331 228 ntTSL 5 BASIC13.13□□□□□ -0.31
HttP42859 Gm40910-202ENSMUST00000223077 569 ntTSL 5 BASIC13.13□□□□□ -0.31
HttP42859 AC112945.1-201ENSMUST00000226413 514 ntBASIC13.13□□□□□ -0.31
HttP42859 Gabpb1-205ENSMUST00000110424 2613 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
HttP42859 Micu1-201ENSMUST00000020311 2336 ntTSL 5 BASIC13.12□□□□□ -0.31
HttP42859 Ighv5-9-201ENSMUST00000103448 418 ntAPPRIS P1 BASIC13.12□□□□□ -0.31
HttP42859 Chtop-206ENSMUST00000107344 2972 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
HttP42859 Rbfox1-202ENSMUST00000115841 1191 ntTSL 5 BASIC13.12□□□□□ -0.31
HttP42859 Fam187b-203ENSMUST00000129773 1213 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
HttP42859 Gm15722-201ENSMUST00000159271 661 ntTSL 3 BASIC13.12□□□□□ -0.31
HttP42859 4930423D24Rik-202ENSMUST00000219785 554 ntTSL 5 BASIC13.12□□□□□ -0.31
HttP42859 Gm15774-201ENSMUST00000141810 2176 ntTSL 5 BASIC13.12□□□□□ -0.31
HttP42859 Cfap52-201ENSMUST00000021287 2199 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
HttP42859 Scg3-202ENSMUST00000213324 2152 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
HttP42859 Zdhhc7-201ENSMUST00000034280 3069 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
HttP42859 Dmrtc1b-203ENSMUST00000118842 1321 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
HttP42859 Rhobtb1-202ENSMUST00000067908 4422 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
HttP42859 Fam114a2-202ENSMUST00000108850 1765 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
HttP42859 Suv39h1-203ENSMUST00000115638 3116 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
HttP42859 Gpr45-203ENSMUST00000179766 3776 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
HttP42859 Ppt1-201ENSMUST00000030412 2381 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
HttP42859 P2rx1-201ENSMUST00000021141 2486 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
HttP42859 Il21r-202ENSMUST00000206103 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
HttP42859 Chtf18-201ENSMUST00000048054 3214 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
HttP42859 Ube2g1-201ENSMUST00000021148 3815 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
HttP42859 Gm16958-201ENSMUST00000180603 1765 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
HttP42859 Gm1113-201ENSMUST00000183573 2434 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
HttP42859 Gm10169-201ENSMUST00000121822 348 ntBASIC13.12□□□□□ -0.31
HttP42859 Gm22846-201ENSMUST00000157706 270 ntBASIC13.12□□□□□ -0.31
HttP42859 Mir133a-1hg-201ENSMUST00000179771 395 ntTSL 3 BASIC13.12□□□□□ -0.31
HttP42859 P4htm-204ENSMUST00000193621 1297 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
HttP42859 Folr2-203ENSMUST00000210598 1204 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
HttP42859 1700026F02Rik-203ENSMUST00000211950 1082 ntTSL 5 BASIC13.12□□□□□ -0.31
HttP42859 Mrps11-201ENSMUST00000032840 1056 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
HttP42859 Zbtb7b-204ENSMUST00000107435 4333 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
HttP42859 Ldb3-204ENSMUST00000064098 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
HttP42859 Gm18210-201ENSMUST00000209001 1524 ntBASIC13.12□□□□□ -0.31
HttP42859 Serpinb12-201ENSMUST00000081277 1689 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
HttP42859 Lgals12-202ENSMUST00000099729 2757 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
HttP42859 Canx-201ENSMUST00000020637 3779 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
HttP42859 Slc7a4-202ENSMUST00000090165 1907 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
HttP42859 Myoc-201ENSMUST00000028020 2074 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
HttP42859 Pde8b-207ENSMUST00000162153 2474 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
HttP42859 Ighv7-1-201ENSMUST00000103474 363 ntAPPRIS P1 BASIC13.11□□□□□ -0.31
HttP42859 Ndufb5-204ENSMUST00000127477 1079 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
HttP42859 Gm20694-201ENSMUST00000176943 404 ntBASIC13.11□□□□□ -0.31
HttP42859 Dmrtc1c2-201ENSMUST00000087896 1255 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
HttP42859 Slc38a6-206ENSMUST00000140523 3032 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
HttP42859 Wfdc8-201ENSMUST00000094351 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
HttP42859 Map3k20-201ENSMUST00000090824 3334 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
HttP42859 Gm31138-201ENSMUST00000212296 1705 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
HttP42859 Cpn1-201ENSMUST00000026210 1828 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
HttP42859 Nrf1-207ENSMUST00000115206 1879 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
HttP42859 Ctnnd2-201ENSMUST00000081728 5944 ntAPPRIS P2 TSL 1 (best) BASIC13.11□□□□□ -0.31
HttP42859 Scfd2-203ENSMUST00000113542 2279 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
HttP42859 Pcbp3-203ENSMUST00000105411 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
HttP42859 Dnajb12-205ENSMUST00000147914 3041 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
HttP42859 Hdac2-202ENSMUST00000105510 3250 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
HttP42859 Ccdc163-202ENSMUST00000106462 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
HttP42859 Gm13351-201ENSMUST00000118087 414 ntBASIC13.11□□□□□ -0.31
HttP42859 Gm13700-201ENSMUST00000118624 1128 ntBASIC13.11□□□□□ -0.31
HttP42859 Elovl6-202ENSMUST00000197070 2275 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
HttP42859 4930543N07Rik-202ENSMUST00000209503 1117 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
HttP42859 Gm18123-201ENSMUST00000210874 822 ntBASIC13.11□□□□□ -0.31
HttP42859 Mcpt1-201ENSMUST00000022836 1014 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
HttP42859 Cct5-201ENSMUST00000022842 1853 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
HttP42859 Ccdc28b-201ENSMUST00000030586 879 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
HttP42859 Borcs7-201ENSMUST00000074912 2176 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
HttP42859 Tex101-201ENSMUST00000078001 1059 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
HttP42859 Elk4-202ENSMUST00000086556 4433 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
HttP42859 Olfr372-201ENSMUST00000093434 1016 ntAPPRIS P1 BASIC13.11□□□□□ -0.31
HttP42859 Dag1-201ENSMUST00000080435 4364 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
HttP42859 Rasl10b-203ENSMUST00000164425 3481 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
HttP42859 Gm18798-201ENSMUST00000187264 1700 ntBASIC13.11□□□□□ -0.31
HttP42859 Oxsm-202ENSMUST00000112624 1586 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
HttP42859 Nudt5-205ENSMUST00000179748 1590 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
HttP42859 Gm43154-214ENSMUST00000211225 1420 ntTSL 5 BASIC13.11□□□□□ -0.31
HttP42859 Dph6-201ENSMUST00000028640 2632 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
HttP42859 1700125H20Rik-202ENSMUST00000100681 687 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
HttP42859 Gm15620-201ENSMUST00000122949 270 ntBASIC13.11□□□□□ -0.31
HttP42859 Gm13272-201ENSMUST00000179425 811 ntAPPRIS P1 BASIC13.11□□□□□ -0.31
HttP42859 Gm18499-201ENSMUST00000220808 1021 ntBASIC13.11□□□□□ -0.31
HttP42859 3100002H09Rik-201ENSMUST00000053604 873 ntAPPRIS P1 BASIC13.11□□□□□ -0.31
HttP42859 Gm26519-201ENSMUST00000181193 2249 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
HttP42859 Tpm1-202ENSMUST00000034928 1824 ntTSL 5 BASIC13.1□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 45.9 ms