Protein–RNA interactions for Protein: P41274

Tnfsf9, Tumor necrosis factor ligand superfamily member 9, mousemouse

Predictions only

Length 309 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfsf9P41274 Ube2a-202ENSMUST00000200835 911 ntTSL 5 BASIC12.2□□□□□ -0.46
Tnfsf9P41274 Ube2a-209ENSMUST00000202991 715 ntAPPRIS ALT1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Tnfsf9P41274 AC164612.1-201ENSMUST00000216699 517 ntTSL 5 BASIC12.2□□□□□ -0.46
Tnfsf9P41274 AC138604.1-201ENSMUST00000226969 739 ntBASIC12.2□□□□□ -0.46
Tnfsf9P41274 Rps3a1-201ENSMUST00000029722 977 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Tnfsf9P41274 Gm10131-201ENSMUST00000080152 736 ntAPPRIS P1 BASIC12.2□□□□□ -0.46
Tnfsf9P41274 1700007G11Rik-201ENSMUST00000080333 861 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Tnfsf9P41274 Zdhhc12-201ENSMUST00000081838 1187 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Tnfsf9P41274 Cryba4-201ENSMUST00000086629 746 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Tnfsf9P41274 Olfr366-201ENSMUST00000091001 930 ntAPPRIS P1 BASIC12.2□□□□□ -0.46
Tnfsf9P41274 Srsf10-205ENSMUST00000126641 3754 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Tnfsf9P41274 Cstf3-201ENSMUST00000028599 2817 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Tnfsf9P41274 Rpn2-202ENSMUST00000116380 2756 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Tnfsf9P41274 Smc6-208ENSMUST00000218866 3373 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Tnfsf9P41274 Rcan2-202ENSMUST00000044895 3363 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Tnfsf9P41274 1500009C09Rik-201ENSMUST00000136948 1526 ntAPPRIS P5 TSL 3 BASIC12.2□□□□□ -0.46
Tnfsf9P41274 Wdr81-204ENSMUST00000173320 6908 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
Tnfsf9P41274 Nrf1-211ENSMUST00000115212 3584 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Tnfsf9P41274 AC137842.1-201ENSMUST00000227896 2064 ntBASIC12.2□□□□□ -0.46
Tnfsf9P41274 Gm19221-201ENSMUST00000221827 1477 ntBASIC12.2□□□□□ -0.46
Tnfsf9P41274 Tmem200a-201ENSMUST00000066049 4115 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Tnfsf9P41274 Dysf-216ENSMUST00000204987 6474 ntAPPRIS ALT2 TSL 5 BASIC12.2□□□□□ -0.46
Tnfsf9P41274 Ddi2-202ENSMUST00000177592 3539 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Tnfsf9P41274 Ntm-203ENSMUST00000115237 2039 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Tnfsf9P41274 5730409E04Rik-202ENSMUST00000164362 2855 ntAPPRIS P1 TSL 3 BASIC12.2□□□□□ -0.46
Tnfsf9P41274 Gtf2f1-201ENSMUST00000002733 1717 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Tnfsf9P41274 5730409E04Rik-201ENSMUST00000097886 2886 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Tnfsf9P41274 B230369F24Rik-201ENSMUST00000141846 2560 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Tnfsf9P41274 4933416C03Rik-201ENSMUST00000099261 2254 ntAPPRIS P1 BASIC12.2□□□□□ -0.46
Tnfsf9P41274 Gm8206-201ENSMUST00000164139 1956 ntTSL 5 BASIC12.19□□□□□ -0.46
Tnfsf9P41274 Gm20683-201ENSMUST00000176751 2790 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
Tnfsf9P41274 Ppip5k1-202ENSMUST00000110625 5226 ntAPPRIS ALT2 TSL 5 BASIC12.19□□□□□ -0.46
Tnfsf9P41274 Vps29-208ENSMUST00000155671 2716 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
Tnfsf9P41274 Kars-203ENSMUST00000164470 2189 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Tnfsf9P41274 Irak2-202ENSMUST00000089022 2974 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Tnfsf9P41274 Myh10-204ENSMUST00000108673 1315 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Tnfsf9P41274 Gm3287-205ENSMUST00000228893 1332 ntBASIC12.19□□□□□ -0.46
Tnfsf9P41274 Pak4-201ENSMUST00000032823 2611 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Tnfsf9P41274 Mtmr2-208ENSMUST00000155679 3088 ntTSL 5 BASIC12.19□□□□□ -0.46
Tnfsf9P41274 Fam43a-201ENSMUST00000059078 3075 ntAPPRIS P1 BASIC12.19□□□□□ -0.46
Tnfsf9P41274 Etfrf1-202ENSMUST00000111719 968 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
Tnfsf9P41274 Adamtsl1-204ENSMUST00000120678 977 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Tnfsf9P41274 Dlx1as-202ENSMUST00000137251 647 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Tnfsf9P41274 Gm13850-201ENSMUST00000140465 623 ntTSL 3 BASIC12.19□□□□□ -0.46
Tnfsf9P41274 Gm26083-201ENSMUST00000157904 193 ntBASIC12.19□□□□□ -0.46
Tnfsf9P41274 Cabp2-202ENSMUST00000159556 781 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Tnfsf9P41274 U2af1l4-206ENSMUST00000163654 781 ntTSL 2 BASIC12.19□□□□□ -0.46
Tnfsf9P41274 Igdcc4-203ENSMUST00000166273 778 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Tnfsf9P41274 U2af1l4-221ENSMUST00000167361 860 ntTSL 2 BASIC12.19□□□□□ -0.46
Tnfsf9P41274 Cdk3-ps-202ENSMUST00000174177 915 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
Tnfsf9P41274 Tmem205-202ENSMUST00000178988 862 ntAPPRIS P1 TSL 2 BASIC12.19□□□□□ -0.46
Tnfsf9P41274 Gm38000-201ENSMUST00000192390 1215 ntBASIC12.19□□□□□ -0.46
Tnfsf9P41274 Gm38092-201ENSMUST00000195600 653 ntBASIC12.19□□□□□ -0.46
Tnfsf9P41274 Txndc17-201ENSMUST00000021158 981 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Tnfsf9P41274 Tmem205-203ENSMUST00000213698 705 ntAPPRIS P1 TSL 3 BASIC12.19□□□□□ -0.46
Tnfsf9P41274 Gm45925-201ENSMUST00000218882 744 ntBASIC12.19□□□□□ -0.46
Tnfsf9P41274 Prss39-201ENSMUST00000027299 1267 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Tnfsf9P41274 Morn3-201ENSMUST00000031437 1128 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Tnfsf9P41274 Ggact-201ENSMUST00000038075 1076 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Tnfsf9P41274 Ssh1-202ENSMUST00000112298 5584 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Tnfsf9P41274 Gm44094-201ENSMUST00000204703 2030 ntBASIC12.19□□□□□ -0.46
Tnfsf9P41274 Usp19-210ENSMUST00000193678 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Tnfsf9P41274 Srl-201ENSMUST00000023161 5000 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Tnfsf9P41274 Cacna2d2-204ENSMUST00000166799 3474 ntAPPRIS ALT2 TSL 5 BASIC12.19□□□□□ -0.46
Tnfsf9P41274 Bach2-201ENSMUST00000037416 3462 ntAPPRIS ALT2 TSL 5 BASIC12.19□□□□□ -0.46
Tnfsf9P41274 Amer2-201ENSMUST00000022561 10506 ntAPPRIS P1 BASIC12.19□□□□□ -0.46
Tnfsf9P41274 Slitrk5-201ENSMUST00000042767 4831 ntAPPRIS P1 TSL 2 BASIC12.19□□□□□ -0.46
Tnfsf9P41274 Tcn2-204ENSMUST00000109990 1914 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Tnfsf9P41274 Gm44089-201ENSMUST00000203624 1930 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Tnfsf9P41274 Daam2-202ENSMUST00000224595 1926 ntBASIC12.19□□□□□ -0.46
Tnfsf9P41274 Evc2-201ENSMUST00000056365 4091 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Tnfsf9P41274 Slc36a1-202ENSMUST00000108867 1611 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Tnfsf9P41274 Gm28590-201ENSMUST00000185679 1609 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Tnfsf9P41274 Lmbr1l-202ENSMUST00000109127 2548 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Tnfsf9P41274 Inpp5e-205ENSMUST00000145701 4147 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
Tnfsf9P41274 Grid1-201ENSMUST00000043349 5720 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Tnfsf9P41274 Gns-201ENSMUST00000040344 3855 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Tnfsf9P41274 Xrra1-201ENSMUST00000036155 2731 ntAPPRIS P2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Tnfsf9P41274 Asxl1-205ENSMUST00000227428 6981 ntAPPRIS ALT2 BASIC12.18□□□□□ -0.46
Tnfsf9P41274 Zfp384-202ENSMUST00000054553 2451 ntTSL 5 BASIC12.18□□□□□ -0.46
Tnfsf9P41274 B930092H01Rik-201ENSMUST00000213377 2678 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Tnfsf9P41274 Amz1-201ENSMUST00000060918 2683 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Tnfsf9P41274 Ppil2-212ENSMUST00000164458 2230 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Tnfsf9P41274 Ero1lb-201ENSMUST00000071973 4239 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Tnfsf9P41274 Rubie-203ENSMUST00000227803 2430 ntBASIC12.18□□□□□ -0.46
Tnfsf9P41274 Gm29530-201ENSMUST00000187556 1956 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Tnfsf9P41274 Lzts1-204ENSMUST00000185176 5019 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
Tnfsf9P41274 Kpna7-203ENSMUST00000116454 1500 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
Tnfsf9P41274 Pnkp-201ENSMUST00000003044 2184 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Tnfsf9P41274 Acin1-216ENSMUST00000141453 2381 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Tnfsf9P41274 6030468B19Rik-201ENSMUST00000106331 1071 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Tnfsf9P41274 Gstt1-202ENSMUST00000120177 1105 ntTSL 2 BASIC12.18□□□□□ -0.46
Tnfsf9P41274 D630024D03Rik-201ENSMUST00000126265 720 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Tnfsf9P41274 6430590A07Rik-201ENSMUST00000181813 1032 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Tnfsf9P41274 Gm2546-201ENSMUST00000182630 991 ntBASIC12.18□□□□□ -0.46
Tnfsf9P41274 Gm4691-202ENSMUST00000182989 885 ntTSL 5 BASIC12.18□□□□□ -0.46
Tnfsf9P41274 Gm8176-201ENSMUST00000191297 1099 ntBASIC12.18□□□□□ -0.46
Tnfsf9P41274 Gm30285-201ENSMUST00000214614 422 ntBASIC12.18□□□□□ -0.46
Tnfsf9P41274 CT025533.2-201ENSMUST00000228715 1248 ntBASIC12.18□□□□□ -0.46
Tnfsf9P41274 Olfr524-201ENSMUST00000051943 1058 ntAPPRIS P1 BASIC12.18□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 42.3 ms