Protein–RNA interactions for Protein: P39689

Cdkn1a, Cyclin-dependent kinase inhibitor 1, mousemouse

Predictions only

Length 159 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdkn1aP39689 Abca3-201ENSMUST00000039013 6476 ntAPPRIS P2 TSL 1 (best) BASIC10.51□□□□□ -0.73
Cdkn1aP39689 Zfp384-202ENSMUST00000054553 2451 ntTSL 5 BASIC10.51□□□□□ -0.73
Cdkn1aP39689 Tgm1-203ENSMUST00000178034 2730 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Cdkn1aP39689 Kcp-203ENSMUST00000101614 4885 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Cdkn1aP39689 BC048403-202ENSMUST00000136432 2968 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
Cdkn1aP39689 Gm26905-201ENSMUST00000180798 6621 ntTSL 5 BASIC10.51□□□□□ -0.73
Cdkn1aP39689 Metap2-206ENSMUST00000180840 2551 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Cdkn1aP39689 Slc36a1-202ENSMUST00000108867 1611 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Cdkn1aP39689 Leng8-203ENSMUST00000121270 3620 ntAPPRIS ALT2 TSL 5 BASIC10.51□□□□□ -0.73
Cdkn1aP39689 Mta2-201ENSMUST00000096240 3135 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Cdkn1aP39689 Shisa9-202ENSMUST00000170672 3421 ntAPPRIS P4 TSL 1 (best) BASIC10.51□□□□□ -0.73
Cdkn1aP39689 Epha8-201ENSMUST00000030420 4713 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Cdkn1aP39689 Gm34006-202ENSMUST00000216467 1918 ntTSL 2 BASIC10.5□□□□□ -0.73
Cdkn1aP39689 Kcna6-202ENSMUST00000112242 3464 ntAPPRIS P1 BASIC10.5□□□□□ -0.73
Cdkn1aP39689 Anapc11-201ENSMUST00000026128 3229 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Cdkn1aP39689 Fam83h-201ENSMUST00000060807 4502 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Cdkn1aP39689 Abhd18-202ENSMUST00000108078 2492 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Cdkn1aP39689 Stx18-203ENSMUST00000114126 3002 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Cdkn1aP39689 Hrg-201ENSMUST00000023590 1734 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Cdkn1aP39689 Dnajc14-207ENSMUST00000219508 2298 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Cdkn1aP39689 Col9a3-201ENSMUST00000103059 2846 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Cdkn1aP39689 Clstn2-202ENSMUST00000162295 4174 ntAPPRIS ALT2 TSL 5 BASIC10.5□□□□□ -0.73
Cdkn1aP39689 Hsd3b7-201ENSMUST00000046863 1828 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Cdkn1aP39689 Gart-201ENSMUST00000023684 3518 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Cdkn1aP39689 Tmod4-202ENSMUST00000107227 1260 ntAPPRIS P1 TSL 5 BASIC10.5□□□□□ -0.73
Cdkn1aP39689 Gm13875-201ENSMUST00000120162 282 ntBASIC10.5□□□□□ -0.73
Cdkn1aP39689 Rbm3-ps-201ENSMUST00000121422 465 ntBASIC10.5□□□□□ -0.73
Cdkn1aP39689 Gm45692-201ENSMUST00000131138 557 ntAPPRIS P1 TSL 5 BASIC10.5□□□□□ -0.73
Cdkn1aP39689 Gm11752-201ENSMUST00000143291 510 ntTSL 2 BASIC10.5□□□□□ -0.73
Cdkn1aP39689 2010320M18Rik-201ENSMUST00000191396 1009 ntBASIC10.5□□□□□ -0.73
Cdkn1aP39689 Gm37259-201ENSMUST00000193903 849 ntBASIC10.5□□□□□ -0.73
Cdkn1aP39689 Hax1-206ENSMUST00000197786 857 ntAPPRIS ALT2 TSL 1 (best) BASIC10.5□□□□□ -0.73
Cdkn1aP39689 Gm44405-201ENSMUST00000198952 126 ntBASIC10.5□□□□□ -0.73
Cdkn1aP39689 Gm44172-201ENSMUST00000203903 1235 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
Cdkn1aP39689 Aprt-203ENSMUST00000211823 590 ntTSL 3 BASIC10.5□□□□□ -0.73
Cdkn1aP39689 AC155813.1-201ENSMUST00000213224 590 ntTSL 3 BASIC10.5□□□□□ -0.73
Cdkn1aP39689 AC164612.1-201ENSMUST00000216699 517 ntTSL 5 BASIC10.5□□□□□ -0.73
Cdkn1aP39689 Trex2-201ENSMUST00000033738 1017 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Cdkn1aP39689 Taf1d-201ENSMUST00000034415 1148 ntAPPRIS P3 TSL 1 (best) BASIC10.5□□□□□ -0.73
Cdkn1aP39689 Ctrb1-201ENSMUST00000034435 878 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Cdkn1aP39689 1700007G11Rik-201ENSMUST00000080333 861 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Cdkn1aP39689 Cryge-201ENSMUST00000087359 631 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Cdkn1aP39689 Gm16519-201ENSMUST00000092011 489 ntAPPRIS P1 BASIC10.5□□□□□ -0.73
Cdkn1aP39689 Nrf1-210ENSMUST00000115211 3295 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
Cdkn1aP39689 Mier3-203ENSMUST00000109272 5279 ntAPPRIS P2 TSL 1 (best) BASIC10.5□□□□□ -0.73
Cdkn1aP39689 Rnf152-202ENSMUST00000172299 8406 ntAPPRIS P1 TSL 2 BASIC10.5□□□□□ -0.73
Cdkn1aP39689 Cd27-201ENSMUST00000032486 1559 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Cdkn1aP39689 Gm4366-201ENSMUST00000201488 1342 ntBASIC10.5□□□□□ -0.73
Cdkn1aP39689 Gm13293-201ENSMUST00000131188 1615 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
Cdkn1aP39689 Usp20-211ENSMUST00000170476 4970 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Cdkn1aP39689 Ccr7-201ENSMUST00000103134 1978 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Cdkn1aP39689 Add2-202ENSMUST00000203196 1970 ntAPPRIS ALT2 TSL 1 (best) BASIC10.5□□□□□ -0.73
Cdkn1aP39689 Pde7b-202ENSMUST00000164195 1665 ntAPPRIS ALT2 TSL 5 BASIC10.5□□□□□ -0.73
Cdkn1aP39689 Snrk-203ENSMUST00000120173 4758 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Cdkn1aP39689 Rp2-202ENSMUST00000115387 4498 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
Cdkn1aP39689 Zfp57-211ENSMUST00000174524 1747 ntAPPRIS P3 TSL 1 (best) BASIC10.5□□□□□ -0.73
Cdkn1aP39689 4931414P19Rik-201ENSMUST00000022786 2670 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Cdkn1aP39689 Rad9b-202ENSMUST00000117263 2371 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
Cdkn1aP39689 Rasl12-201ENSMUST00000085453 2390 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Cdkn1aP39689 Pcdhgc3-201ENSMUST00000076807 4687 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Cdkn1aP39689 Abo-201ENSMUST00000102900 1779 ntAPPRIS P2 TSL 1 (best) BASIC10.49□□□□□ -0.73
Cdkn1aP39689 Zeb2-201ENSMUST00000028229 5335 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
Cdkn1aP39689 Eme1-201ENSMUST00000039949 2444 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Cdkn1aP39689 Misp-201ENSMUST00000046833 2414 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Cdkn1aP39689 Ptch2-201ENSMUST00000030443 4382 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Cdkn1aP39689 Pcdhgb1-201ENSMUST00000192931 4723 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Cdkn1aP39689 Necab1-202ENSMUST00000108273 2135 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Cdkn1aP39689 Dnmbp-202ENSMUST00000212032 5074 ntAPPRIS ALT2 TSL 5 BASIC10.49□□□□□ -0.73
Cdkn1aP39689 Oas1f-201ENSMUST00000057814 1480 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Cdkn1aP39689 Rasd2-202ENSMUST00000139848 2810 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Cdkn1aP39689 Tmprss9-203ENSMUST00000219817 3581 ntAPPRIS P1 TSL 5 BASIC10.49□□□□□ -0.73
Cdkn1aP39689 Gm42928-201ENSMUST00000197338 3339 ntBASIC10.49□□□□□ -0.73
Cdkn1aP39689 Ticrr-201ENSMUST00000035977 7199 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Cdkn1aP39689 Chchd3-201ENSMUST00000066379 1550 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Cdkn1aP39689 Usp19-203ENSMUST00000166103 4473 ntAPPRIS ALT2 TSL 1 (best) BASIC10.49□□□□□ -0.73
Cdkn1aP39689 Abca7-203ENSMUST00000171637 6638 ntAPPRIS ALT2 TSL 1 (best) BASIC10.49□□□□□ -0.73
Cdkn1aP39689 Syncrip-210ENSMUST00000174391 6257 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
Cdkn1aP39689 Slc6a18-210ENSMUST00000223074 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC10.49□□□□□ -0.73
Cdkn1aP39689 Adtrp-202ENSMUST00000121404 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC10.49□□□□□ -0.73
Cdkn1aP39689 6030468B19Rik-201ENSMUST00000106331 1071 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Cdkn1aP39689 Smyd3-202ENSMUST00000111134 1229 ntTSL 2 BASIC10.49□□□□□ -0.73
Cdkn1aP39689 Thoc6-203ENSMUST00000115489 1083 ntTSL 5 BASIC10.49□□□□□ -0.73
Cdkn1aP39689 Timm10b-208ENSMUST00000151193 1083 ntTSL 2 BASIC10.49□□□□□ -0.73
Cdkn1aP39689 Gm17376-201ENSMUST00000166016 84 ntBASIC10.49□□□□□ -0.73
Cdkn1aP39689 Gm26973-201ENSMUST00000182105 696 ntTSL 3 BASIC10.49□□□□□ -0.73
Cdkn1aP39689 Gm5597-201ENSMUST00000182353 1193 ntBASIC10.49□□□□□ -0.73
Cdkn1aP39689 Gm5441-202ENSMUST00000190132 449 ntTSL 2 BASIC10.49□□□□□ -0.73
Cdkn1aP39689 Gm38000-201ENSMUST00000192390 1215 ntBASIC10.49□□□□□ -0.73
Cdkn1aP39689 Ube2a-202ENSMUST00000200835 911 ntTSL 5 BASIC10.49□□□□□ -0.73
Cdkn1aP39689 Ube2a-209ENSMUST00000202991 715 ntAPPRIS ALT1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Cdkn1aP39689 4933436H12Rik-201ENSMUST00000207304 658 ntTSL 5 BASIC10.49□□□□□ -0.73
Cdkn1aP39689 Gm35082-201ENSMUST00000207308 338 ntTSL 3 BASIC10.49□□□□□ -0.73
Cdkn1aP39689 Gm45881-201ENSMUST00000210659 517 ntTSL 5 BASIC10.49□□□□□ -0.73
Cdkn1aP39689 Timm9-203ENSMUST00000220482 859 ntAPPRIS P1 TSL 3 BASIC10.49□□□□□ -0.73
Cdkn1aP39689 AC122371.3-201ENSMUST00000223402 1061 ntBASIC10.49□□□□□ -0.73
Cdkn1aP39689 AC138604.1-201ENSMUST00000226969 739 ntBASIC10.49□□□□□ -0.73
Cdkn1aP39689 AC108416.1-202ENSMUST00000228927 1201 ntBASIC10.49□□□□□ -0.73
Cdkn1aP39689 Tnfrsf17-201ENSMUST00000023140 815 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Cdkn1aP39689 Coq7-202ENSMUST00000098090 1215 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
Cdkn1aP39689 Rubcn-202ENSMUST00000089684 5311 ntAPPRIS ALT2 TSL 1 (best) BASIC10.49□□□□□ -0.73
Retrieved 100 of 76,532 protein–RNA pairs in 76.4 ms