Protein–RNA interactions for Protein: P39038

Cdh4, Cadherin-4, mousemouse

Predictions only

Length 913 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh4P39038 Arhgef37-201ENSMUST00000171629 3234 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.45
Cdh4P39038 Tbc1d22a-201ENSMUST00000063414 3229 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Cdh4P39038 Akr1b3-201ENSMUST00000102980 1387 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Cdh4P39038 Trp53-202ENSMUST00000108657 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Cdh4P39038 Saa3-202ENSMUST00000210913 2200 ntTSL 3 BASIC12.21□□□□□ -0.45
Cdh4P39038 Abo-201ENSMUST00000102900 1779 ntAPPRIS P2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Cdh4P39038 Camta1-201ENSMUST00000049790 8423 ntAPPRIS P2 TSL 5 BASIC12.21□□□□□ -0.45
Cdh4P39038 2410131K14Rik-201ENSMUST00000049138 5649 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Cdh4P39038 Plcd3-201ENSMUST00000103077 3023 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Cdh4P39038 Tsku-205ENSMUST00000167405 2597 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.45
Cdh4P39038 Snord83b-201ENSMUST00000104546 94 ntBASIC12.21□□□□□ -0.45
Cdh4P39038 Spata3-202ENSMUST00000113344 1047 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.45
Cdh4P39038 Gm11591-201ENSMUST00000120063 702 ntBASIC12.21□□□□□ -0.45
Cdh4P39038 Gm15420-201ENSMUST00000133274 382 ntTSL 3 BASIC12.21□□□□□ -0.45
Cdh4P39038 Gm15201-201ENSMUST00000136472 1210 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Cdh4P39038 Gm11752-201ENSMUST00000143291 510 ntTSL 2 BASIC12.21□□□□□ -0.45
Cdh4P39038 Gm16191-202ENSMUST00000148464 484 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Cdh4P39038 Gm25261-201ENSMUST00000157416 134 ntBASIC12.21□□□□□ -0.45
Cdh4P39038 Gm43438-201ENSMUST00000198133 379 ntBASIC12.21□□□□□ -0.45
Cdh4P39038 Fam168a-206ENSMUST00000208013 1129 ntTSL 5 BASIC12.21□□□□□ -0.45
Cdh4P39038 AC148335.1-201ENSMUST00000218778 818 ntTSL 5 BASIC12.21□□□□□ -0.45
Cdh4P39038 Gm34084-201ENSMUST00000222236 1298 ntTSL 5 BASIC12.21□□□□□ -0.45
Cdh4P39038 Net1-207ENSMUST00000223258 597 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Cdh4P39038 AC069562.3-201ENSMUST00000225387 587 ntBASIC12.21□□□□□ -0.45
Cdh4P39038 Mal-201ENSMUST00000028853 486 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Cdh4P39038 Exosc2-201ENSMUST00000038474 1686 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Cdh4P39038 Klhl26-203ENSMUST00000209415 2919 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Cdh4P39038 Nckap5l-201ENSMUST00000023747 4853 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Cdh4P39038 Arhgef40-202ENSMUST00000100639 4843 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.46
Cdh4P39038 Atxn7l3b-201ENSMUST00000099276 3566 ntAPPRIS P1 BASIC12.21□□□□□ -0.46
Cdh4P39038 Thpo-201ENSMUST00000076422 1587 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Cdh4P39038 Slc29a1-203ENSMUST00000097317 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.46
Cdh4P39038 Npr1-201ENSMUST00000029540 4066 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Cdh4P39038 Evc2-201ENSMUST00000056365 4091 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Cdh4P39038 Pnck-203ENSMUST00000114473 1492 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Cdh4P39038 Gm45643-201ENSMUST00000211364 1484 ntBASIC12.21□□□□□ -0.46
Cdh4P39038 Adamts5-201ENSMUST00000023611 8091 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Cdh4P39038 Madd-209ENSMUST00000111371 5816 ntAPPRIS ALT2 TSL 2 BASIC12.21□□□□□ -0.46
Cdh4P39038 Madd-210ENSMUST00000111372 5813 ntAPPRIS ALT2 TSL 2 BASIC12.21□□□□□ -0.46
Cdh4P39038 Nrf1-210ENSMUST00000115211 3295 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
Cdh4P39038 Cldn18-204ENSMUST00000136429 1409 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Cdh4P39038 Sfpq-201ENSMUST00000030623 3465 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Cdh4P39038 Psmd13-208ENSMUST00000163610 1382 ntTSL 5 BASIC12.2□□□□□ -0.46
Cdh4P39038 Bicra-201ENSMUST00000094821 5360 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
Cdh4P39038 Rbpj-207ENSMUST00000201883 4961 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Cdh4P39038 Gm43666-201ENSMUST00000197116 2989 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Cdh4P39038 Adprhl1-205ENSMUST00000204916 5228 ntTSL 5 BASIC12.2□□□□□ -0.46
Cdh4P39038 Slc36a1-202ENSMUST00000108867 1611 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Cdh4P39038 4930429D17Rik-201ENSMUST00000198193 1624 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Cdh4P39038 Klhl8-203ENSMUST00000112815 2898 ntTSL 5 BASIC12.2□□□□□ -0.46
Cdh4P39038 Kcnb1-204ENSMUST00000207917 11153 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Cdh4P39038 Nsg2-203ENSMUST00000109409 641 ntTSL 2 BASIC12.2□□□□□ -0.46
Cdh4P39038 3110009E18Rik-203ENSMUST00000112644 488 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Cdh4P39038 Fuom-203ENSMUST00000121115 872 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Cdh4P39038 Ablim2-213ENSMUST00000150146 415 ntTSL 2 BASIC12.2□□□□□ -0.46
Cdh4P39038 Snhg17-206ENSMUST00000152125 1046 ntTSL 3 BASIC12.2□□□□□ -0.46
Cdh4P39038 Egfl7-211ENSMUST00000152988 723 ntTSL 2 BASIC12.2□□□□□ -0.46
Cdh4P39038 Pcgf1-202ENSMUST00000165164 918 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Cdh4P39038 Rnf141-207ENSMUST00000176716 1080 ntTSL 2 BASIC12.2□□□□□ -0.46
Cdh4P39038 2810039B14Rik-206ENSMUST00000185040 1113 ntBASIC12.2□□□□□ -0.46
Cdh4P39038 Gm19184-201ENSMUST00000196798 928 ntBASIC12.2□□□□□ -0.46
Cdh4P39038 Gm18916-201ENSMUST00000198264 1246 ntBASIC12.2□□□□□ -0.46
Cdh4P39038 Gm18584-201ENSMUST00000203098 964 ntBASIC12.2□□□□□ -0.46
Cdh4P39038 Gm44756-201ENSMUST00000206172 1069 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Cdh4P39038 1700029I15Rik-201ENSMUST00000054316 364 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Cdh4P39038 Mir339-201ENSMUST00000083659 96 ntBASIC12.2□□□□□ -0.46
Cdh4P39038 Gm10478-201ENSMUST00000084451 396 ntBASIC12.2□□□□□ -0.46
Cdh4P39038 Dmrtc1c2-201ENSMUST00000087896 1255 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Cdh4P39038 Fam171a1-201ENSMUST00000062934 4129 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Cdh4P39038 Gm5385-201ENSMUST00000118988 1559 ntBASIC12.2□□□□□ -0.46
Cdh4P39038 Asic3-202ENSMUST00000196296 1593 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
Cdh4P39038 Epm2aip1-201ENSMUST00000060711 7149 ntAPPRIS P1 BASIC12.2□□□□□ -0.46
Cdh4P39038 Abhd18-202ENSMUST00000108078 2492 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Cdh4P39038 C130026L21Rik-201ENSMUST00000064930 2472 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Cdh4P39038 Cbx6-202ENSMUST00000109625 3056 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Cdh4P39038 Phrf1-202ENSMUST00000122143 4864 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Cdh4P39038 Clcn3-201ENSMUST00000004430 4175 ntAPPRIS ALT1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Cdh4P39038 Mpp3-202ENSMUST00000100400 2997 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Cdh4P39038 Gadl1-203ENSMUST00000121770 1763 ntAPPRIS P2 TSL 5 BASIC12.2□□□□□ -0.46
Cdh4P39038 Tmem41b-201ENSMUST00000094097 3840 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Cdh4P39038 Mrvi1-201ENSMUST00000005751 6198 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
Cdh4P39038 Golga4-201ENSMUST00000084820 7583 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Cdh4P39038 Pla2g15-204ENSMUST00000212963 2578 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Cdh4P39038 Pcca-201ENSMUST00000038374 2592 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Cdh4P39038 Kdm2a-201ENSMUST00000047898 8578 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Cdh4P39038 Dnajc14-207ENSMUST00000219508 2298 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Cdh4P39038 Lztr1-201ENSMUST00000023444 3112 ntAPPRIS P2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Cdh4P39038 Cdc42se1-201ENSMUST00000053872 2805 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Cdh4P39038 Fbxw7-201ENSMUST00000029727 2221 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
Cdh4P39038 Fn1-201ENSMUST00000055226 8315 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
Cdh4P39038 Fgd5-201ENSMUST00000089334 6095 ntAPPRIS P2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Cdh4P39038 Gm36500-201ENSMUST00000221821 1626 ntTSL 5 BASIC12.19□□□□□ -0.46
Cdh4P39038 Gm44414-201ENSMUST00000203660 2109 ntBASIC12.19□□□□□ -0.46
Cdh4P39038 Rgs12-205ENSMUST00000114283 2628 ntAPPRIS ALT2 TSL 5 BASIC12.19□□□□□ -0.46
Cdh4P39038 Gm14703-201ENSMUST00000145894 1820 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Cdh4P39038 Gm44851-201ENSMUST00000205735 2309 ntBASIC12.19□□□□□ -0.46
Cdh4P39038 Slc4a1ap-209ENSMUST00000202214 2806 ntAPPRIS P3 TSL 5 BASIC12.19□□□□□ -0.46
Cdh4P39038 Blvrb-202ENSMUST00000108357 782 ntTSL 2 BASIC12.19□□□□□ -0.46
Cdh4P39038 Fam71f2-201ENSMUST00000115286 1180 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Cdh4P39038 Gm12315-201ENSMUST00000151599 911 ntTSL 3 BASIC12.19□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 52.3 ms