Protein–RNA interactions for Protein: P38575

Upk2, Uroplakin-2, mousemouse

Predictions only

Length 184 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upk2P38575 Mrps30-201ENSMUST00000022245 3319 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Upk2P38575 Wdr66-202ENSMUST00000121964 4873 ntAPPRIS P1 TSL 5 BASIC11.16□□□□□ -0.62
Upk2P38575 Nmral1-203ENSMUST00000115851 1306 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Upk2P38575 Tmprss12-201ENSMUST00000096200 1349 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Upk2P38575 Nol4-206ENSMUST00000164186 2622 ntAPPRIS P4 TSL 5 BASIC11.16□□□□□ -0.62
Upk2P38575 Rbm39-203ENSMUST00000109587 2810 ntAPPRIS P3 TSL 1 (best) BASIC11.16□□□□□ -0.62
Upk2P38575 Lcn5-203ENSMUST00000100313 660 ntAPPRIS ALT2 TSL 1 (best) BASIC11.16□□□□□ -0.62
Upk2P38575 Ice2-203ENSMUST00000117610 800 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Upk2P38575 Gm12390-201ENSMUST00000117897 397 ntBASIC11.16□□□□□ -0.62
Upk2P38575 Pisd-ps1-201ENSMUST00000119128 1115 ntBASIC11.16□□□□□ -0.62
Upk2P38575 Gm15703-201ENSMUST00000120250 880 ntBASIC11.16□□□□□ -0.62
Upk2P38575 Isg20-204ENSMUST00000121645 1087 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Upk2P38575 Gm1335-201ENSMUST00000121653 386 ntBASIC11.16□□□□□ -0.62
Upk2P38575 Nr2f1-203ENSMUST00000127137 991 ntTSL 5 BASIC11.16□□□□□ -0.62
Upk2P38575 2210408F21Rik-210ENSMUST00000151076 539 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Upk2P38575 Gm17150-201ENSMUST00000165577 381 ntBASIC11.16□□□□□ -0.62
Upk2P38575 Tldc2-202ENSMUST00000166140 639 ntAPPRIS P2 TSL 5 BASIC11.16□□□□□ -0.62
Upk2P38575 Psme1-202ENSMUST00000172738 681 ntTSL 5 BASIC11.16□□□□□ -0.62
Upk2P38575 6430590A07Rik-201ENSMUST00000181813 1032 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Upk2P38575 Mrpl30-205ENSMUST00000193673 662 ntAPPRIS P1 TSL 2 BASIC11.16□□□□□ -0.62
Upk2P38575 Aprt-203ENSMUST00000211823 590 ntTSL 3 BASIC11.16□□□□□ -0.62
Upk2P38575 Tyms-ps-201ENSMUST00000219550 915 ntBASIC11.16□□□□□ -0.62
Upk2P38575 Gm24526-201ENSMUST00000082921 158 ntBASIC11.16□□□□□ -0.62
Upk2P38575 5830411N06Rik-202ENSMUST00000093984 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC11.16□□□□□ -0.62
Upk2P38575 Rab11a-208ENSMUST00000172298 2336 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Upk2P38575 Adra1a-206ENSMUST00000225182 2337 ntBASIC11.16□□□□□ -0.62
Upk2P38575 Tgm1-202ENSMUST00000168729 2852 ntAPPRIS P1 TSL 5 BASIC11.16□□□□□ -0.62
Upk2P38575 Smpd2-201ENSMUST00000019965 1602 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Upk2P38575 Slc39a8-201ENSMUST00000029810 3203 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Upk2P38575 C030034I22Rik-202ENSMUST00000188481 4231 ntBASIC11.16□□□□□ -0.62
Upk2P38575 Clca2-203ENSMUST00000198993 2774 ntAPPRIS ALT2 TSL 1 (best) BASIC11.16□□□□□ -0.62
Upk2P38575 Cplx1-201ENSMUST00000046892 2189 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Upk2P38575 Pex11b-207ENSMUST00000165842 1562 ntTSL 2 BASIC11.16□□□□□ -0.62
Upk2P38575 Usp19-210ENSMUST00000193678 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC11.16□□□□□ -0.62
Upk2P38575 Tmem80-204ENSMUST00000128906 1387 ntTSL 2 BASIC11.16□□□□□ -0.62
Upk2P38575 Ccng1-201ENSMUST00000020576 3512 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Upk2P38575 Gabrg3-202ENSMUST00000068911 9767 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Upk2P38575 Rpe-202ENSMUST00000113995 2713 ntTSL 3 BASIC11.15□□□□□ -0.62
Upk2P38575 Pgap2-204ENSMUST00000120879 2141 ntAPPRIS P2 TSL 1 (best) BASIC11.15□□□□□ -0.62
Upk2P38575 Rlbp1-202ENSMUST00000179243 2142 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Upk2P38575 Rassf8-201ENSMUST00000032388 1733 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Upk2P38575 Wdr25-202ENSMUST00000167816 2657 ntAPPRIS P1 TSL 5 BASIC11.15□□□□□ -0.62
Upk2P38575 Ppara-202ENSMUST00000109422 3413 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Upk2P38575 Sh3bp2-202ENSMUST00000101316 3031 ntAPPRIS ALT2 TSL 1 (best) BASIC11.15□□□□□ -0.62
Upk2P38575 Mat2b-202ENSMUST00000101347 2053 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Upk2P38575 Calcoco1-201ENSMUST00000023818 2822 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Upk2P38575 Gm10339-203ENSMUST00000225409 1671 ntBASIC11.15□□□□□ -0.62
Upk2P38575 1110034G24Rik-202ENSMUST00000110132 1471 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Upk2P38575 Usp20-211ENSMUST00000170476 4970 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Upk2P38575 Tktl2-201ENSMUST00000002025 2021 ntAPPRIS P1 BASIC11.15□□□□□ -0.62
Upk2P38575 Eif4enif1-213ENSMUST00000179770 3676 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Upk2P38575 Slc31a2-201ENSMUST00000084530 1820 ntAPPRIS P3 TSL 1 (best) BASIC11.15□□□□□ -0.62
Upk2P38575 Id1-202ENSMUST00000109824 1160 ntAPPRIS ALT2 BASIC11.15□□□□□ -0.62
Upk2P38575 Snap25-202ENSMUST00000110098 1014 ntAPPRIS ALT1 TSL 3 BASIC11.15□□□□□ -0.62
Upk2P38575 Gm4984-201ENSMUST00000115987 360 ntBASIC11.15□□□□□ -0.62
Upk2P38575 Cdkn1a-202ENSMUST00000119901 748 ntAPPRIS P1 TSL 2 BASIC11.15□□□□□ -0.62
Upk2P38575 Pisd-ps2-202ENSMUST00000142526 1175 ntBASIC11.15□□□□□ -0.62
Upk2P38575 C87198-201ENSMUST00000173553 1045 ntTSL 3 BASIC11.15□□□□□ -0.62
Upk2P38575 Gm9630-201ENSMUST00000178304 885 ntBASIC11.15□□□□□ -0.62
Upk2P38575 Gm38092-201ENSMUST00000195600 653 ntBASIC11.15□□□□□ -0.62
Upk2P38575 AC165260.3-202ENSMUST00000224550 1031 ntBASIC11.15□□□□□ -0.62
Upk2P38575 AC022775.2-201ENSMUST00000227885 646 ntBASIC11.15□□□□□ -0.62
Upk2P38575 Nub1-201ENSMUST00000068825 3269 ntAPPRIS P3 TSL 1 (best) BASIC11.15□□□□□ -0.62
Upk2P38575 Pex5-204ENSMUST00000112531 3075 ntAPPRIS ALT1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Upk2P38575 Serpinb12-202ENSMUST00000112724 1623 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Upk2P38575 Taf1c-201ENSMUST00000093099 3236 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Upk2P38575 C230034O21Rik-201ENSMUST00000153659 2836 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Upk2P38575 Tmtc3-201ENSMUST00000058154 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC11.15□□□□□ -0.62
Upk2P38575 Gal3st4-203ENSMUST00000161647 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC11.15□□□□□ -0.62
Upk2P38575 Abcb6-201ENSMUST00000027396 2966 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Upk2P38575 Wisp1-201ENSMUST00000005255 5097 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Upk2P38575 Bace1-201ENSMUST00000034591 6058 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.63
Upk2P38575 Smug1-201ENSMUST00000064067 3281 ntAPPRIS P1 TSL 2 BASIC11.15□□□□□ -0.63
Upk2P38575 Dst-213ENSMUST00000183302 8788 ntTSL 1 (best) BASIC11.15□□□□□ -0.63
Upk2P38575 Gm27196-201ENSMUST00000184787 2582 ntBASIC11.15□□□□□ -0.63
Upk2P38575 Slc25a22-223ENSMUST00000201710 2565 ntAPPRIS P1 TSL 5 BASIC11.15□□□□□ -0.63
Upk2P38575 Shc1-203ENSMUST00000107417 3079 ntTSL 1 (best) BASIC11.15□□□□□ -0.63
Upk2P38575 Nrf1-207ENSMUST00000115206 1879 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.63
Upk2P38575 Dgkg-201ENSMUST00000023578 2725 ntAPPRIS ALT2 TSL 1 (best) BASIC11.15□□□□□ -0.63
Upk2P38575 Zfp862-ps-204ENSMUST00000204484 6065 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Upk2P38575 Ivns1abp-201ENSMUST00000023918 3511 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Upk2P38575 Gm4735-201ENSMUST00000138679 1302 ntBASIC11.14□□□□□ -0.63
Upk2P38575 Gm5855-201ENSMUST00000200240 1305 ntBASIC11.14□□□□□ -0.63
Upk2P38575 2810430I11Rik-201ENSMUST00000154246 3416 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Upk2P38575 Kifc1-201ENSMUST00000114361 2260 ntAPPRIS ALT2 TSL 5 BASIC11.14□□□□□ -0.63
Upk2P38575 Clcn3-201ENSMUST00000004430 4175 ntAPPRIS ALT1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Upk2P38575 Atp8a1-201ENSMUST00000037380 8178 ntAPPRIS P4 TSL 1 (best) BASIC11.14□□□□□ -0.63
Upk2P38575 Irak1-203ENSMUST00000101458 2052 ntAPPRIS ALT2 TSL 5 BASIC11.14□□□□□ -0.63
Upk2P38575 Ppcs-202ENSMUST00000106316 954 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Upk2P38575 Ppih-203ENSMUST00000106318 800 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Upk2P38575 Gm13394-201ENSMUST00000121658 1000 ntBASIC11.14□□□□□ -0.63
Upk2P38575 Naa60-209ENSMUST00000175809 279 ntTSL 5 BASIC11.14□□□□□ -0.63
Upk2P38575 Gm8602-201ENSMUST00000184045 607 ntBASIC11.14□□□□□ -0.63
Upk2P38575 Gm37748-201ENSMUST00000194379 1140 ntBASIC11.14□□□□□ -0.63
Upk2P38575 9130604C24Rik-201ENSMUST00000197965 956 ntBASIC11.14□□□□□ -0.63
Upk2P38575 Spc24-204ENSMUST00000216057 627 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Upk2P38575 AC069562.3-201ENSMUST00000225387 587 ntBASIC11.14□□□□□ -0.63
Upk2P38575 Treml1-201ENSMUST00000024792 1235 ntAPPRIS ALT2 TSL 1 (best) BASIC11.14□□□□□ -0.63
Upk2P38575 Tatdn3-201ENSMUST00000027945 1196 ntAPPRIS ALT2 TSL 3 BASIC11.14□□□□□ -0.63
Upk2P38575 Bst2-201ENSMUST00000051672 792 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Retrieved 100 of 76,532 protein–RNA pairs in 42 ms