Protein–RNA interactions for Protein: P35951

Ldlr, Low-density lipoprotein receptor, mousemouse

Predictions only

Length 862 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LdlrP35951 Chst3-201ENSMUST00000068690 5985 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
LdlrP35951 Mir686-201ENSMUST00000102174 109 ntBASIC12.69□□□□□ -0.38
LdlrP35951 Timm10b-202ENSMUST00000106780 671 ntAPPRIS P2 TSL 2 BASIC12.69□□□□□ -0.38
LdlrP35951 Rsf1os2-203ENSMUST00000155074 998 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
LdlrP35951 Gm12840-201ENSMUST00000156081 627 ntTSL 5 BASIC12.69□□□□□ -0.38
LdlrP35951 Gm19817-201ENSMUST00000199764 2132 ntBASIC12.69□□□□□ -0.38
LdlrP35951 Gm44780-201ENSMUST00000205409 581 ntTSL 3 BASIC12.69□□□□□ -0.38
LdlrP35951 Pomc-202ENSMUST00000218089 977 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
LdlrP35951 Zscan30-202ENSMUST00000224144 1458 ntBASIC12.69□□□□□ -0.38
LdlrP35951 Arhgap12-211ENSMUST00000182383 2500 ntAPPRIS ALT2 TSL 5 BASIC12.69□□□□□ -0.38
LdlrP35951 Bbs4-201ENSMUST00000026265 2518 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
LdlrP35951 Wdfy1-204ENSMUST00000113512 4551 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
LdlrP35951 Wdfy1-205ENSMUST00000113513 4551 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
LdlrP35951 Wdfy1-206ENSMUST00000113514 4551 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
LdlrP35951 Wdfy1-207ENSMUST00000113515 4551 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
LdlrP35951 Wnt7b-202ENSMUST00000109424 3492 ntAPPRIS ALT1 TSL 1 (best) BASIC12.69□□□□□ -0.38
LdlrP35951 Plekha2-204ENSMUST00000128715 3463 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
LdlrP35951 Phyh-201ENSMUST00000027975 1438 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
LdlrP35951 Aire-216ENSMUST00000156417 1627 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
LdlrP35951 Rpl22-208ENSMUST00000188151 2048 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
LdlrP35951 Capn3-201ENSMUST00000028748 2606 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
LdlrP35951 Cog6-201ENSMUST00000036665 3182 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
LdlrP35951 Zfp433-202ENSMUST00000200889 2384 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
LdlrP35951 Gm32687-201ENSMUST00000220314 2379 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
LdlrP35951 Grid1-201ENSMUST00000043349 5720 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
LdlrP35951 Spert-202ENSMUST00000164082 1560 ntAPPRIS ALT2 TSL 2 BASIC12.69□□□□□ -0.38
LdlrP35951 Celrr-202ENSMUST00000181433 1561 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
LdlrP35951 Rgs20-202ENSMUST00000118000 2125 ntAPPRIS ALT2 TSL 5 BASIC12.68□□□□□ -0.38
LdlrP35951 Edc3-201ENSMUST00000043990 5708 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
LdlrP35951 Fbln7-202ENSMUST00000110324 3228 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
LdlrP35951 Gm36970-201ENSMUST00000193688 1859 ntBASIC12.68□□□□□ -0.38
LdlrP35951 Igf2r-201ENSMUST00000024599 8887 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
LdlrP35951 E230020A03Rik-201ENSMUST00000194646 2386 ntBASIC12.68□□□□□ -0.38
LdlrP35951 Ins2-204ENSMUST00000105932 455 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
LdlrP35951 Pnpo-202ENSMUST00000107629 681 ntTSL 3 BASIC12.68□□□□□ -0.38
LdlrP35951 Fgf18-202ENSMUST00000109363 991 ntTSL 3 BASIC12.68□□□□□ -0.38
LdlrP35951 4933427I22Rik-201ENSMUST00000138672 393 ntTSL 3 BASIC12.68□□□□□ -0.38
LdlrP35951 Gm15429-201ENSMUST00000151268 798 ntBASIC12.68□□□□□ -0.38
LdlrP35951 Oprm1-229ENSMUST00000152674 1179 ntTSL 3 BASIC12.68□□□□□ -0.38
LdlrP35951 Gm20033-203ENSMUST00000180912 796 ntTSL 5 BASIC12.68□□□□□ -0.38
LdlrP35951 Gm8652-201ENSMUST00000181363 964 ntBASIC12.68□□□□□ -0.38
LdlrP35951 Gm27847-201ENSMUST00000183711 107 ntBASIC12.68□□□□□ -0.38
LdlrP35951 Gm27375-201ENSMUST00000183799 107 ntBASIC12.68□□□□□ -0.38
LdlrP35951 Gm29127-201ENSMUST00000188304 517 ntBASIC12.68□□□□□ -0.38
LdlrP35951 Gm44756-201ENSMUST00000206172 1069 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
LdlrP35951 Jakmip1-215ENSMUST00000212047 1191 ntTSL 5 BASIC12.68□□□□□ -0.38
LdlrP35951 Gm33460-201ENSMUST00000212286 536 ntTSL 5 BASIC12.68□□□□□ -0.38
LdlrP35951 Gm36634-201ENSMUST00000218356 1259 ntTSL 3 BASIC12.68□□□□□ -0.38
LdlrP35951 Ins2-201ENSMUST00000000220 478 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
LdlrP35951 Csrp3-201ENSMUST00000032658 877 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
LdlrP35951 Fam241b-202ENSMUST00000064050 1096 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
LdlrP35951 Plch2-206ENSMUST00000135665 4349 ntAPPRIS ALT2 TSL 5 BASIC12.68□□□□□ -0.38
LdlrP35951 Synpo-209ENSMUST00000143275 5040 ntAPPRIS ALT2 TSL 5 BASIC12.68□□□□□ -0.38
LdlrP35951 Smg8-201ENSMUST00000020801 3218 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
LdlrP35951 Dnmt3a-201ENSMUST00000020991 9685 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
LdlrP35951 Rps6kb1-207ENSMUST00000154617 5531 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
LdlrP35951 Gm45338-207ENSMUST00000211499 1405 ntTSL 5 BASIC12.68□□□□□ -0.38
LdlrP35951 Sertad2-203ENSMUST00000109586 5515 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
LdlrP35951 Gm9866-202ENSMUST00000182473 1882 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
LdlrP35951 Cyp27b1-201ENSMUST00000165764 2380 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
LdlrP35951 Med28-205ENSMUST00000156481 4560 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
LdlrP35951 Syngr2-201ENSMUST00000026649 1520 ntAPPRIS P2 TSL 1 (best) BASIC12.67□□□□□ -0.38
LdlrP35951 Ero1lb-201ENSMUST00000071973 4239 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
LdlrP35951 Dysf-213ENSMUST00000203803 6590 ntTSL 5 BASIC12.67□□□□□ -0.38
LdlrP35951 Acvrl1-205ENSMUST00000120754 3506 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
LdlrP35951 Arl13b-201ENSMUST00000089289 3528 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
LdlrP35951 Tmem115-201ENSMUST00000010189 2194 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
LdlrP35951 Slc39a9-204ENSMUST00000217889 2155 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
LdlrP35951 Zfp961-202ENSMUST00000131237 2689 ntAPPRIS ALT2 TSL 3 BASIC12.67□□□□□ -0.38
LdlrP35951 Tgfbr2-201ENSMUST00000035014 3476 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
LdlrP35951 C530008M17Rik-204ENSMUST00000121160 6921 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
LdlrP35951 Abhd6-203ENSMUST00000225234 1958 ntBASIC12.67□□□□□ -0.38
LdlrP35951 Hsd3b3-201ENSMUST00000090743 1492 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
LdlrP35951 Alpk3-201ENSMUST00000107348 6369 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
LdlrP35951 Retsat-205ENSMUST00000176364 1647 ntTSL 5 BASIC12.67□□□□□ -0.38
LdlrP35951 Sncaip-209ENSMUST00000179625 2568 ntTSL 5 BASIC12.67□□□□□ -0.38
LdlrP35951 Pabpc2-201ENSMUST00000063219 2586 ntAPPRIS P1 BASIC12.67□□□□□ -0.38
LdlrP35951 1110032A03Rik-201ENSMUST00000042468 2082 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
LdlrP35951 Gm5638-201ENSMUST00000118618 1258 ntBASIC12.67□□□□□ -0.38
LdlrP35951 Gm10863-205ENSMUST00000148028 905 ntTSL 3 BASIC12.67□□□□□ -0.38
LdlrP35951 Carmn-202ENSMUST00000182244 988 ntTSL 2 BASIC12.67□□□□□ -0.38
LdlrP35951 Sox2ot-216ENSMUST00000200092 767 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
LdlrP35951 Gabarapl1-204ENSMUST00000204956 539 ntAPPRIS P1 TSL 3 BASIC12.67□□□□□ -0.38
LdlrP35951 Gm45505-201ENSMUST00000210252 948 ntTSL 5 BASIC12.67□□□□□ -0.38
LdlrP35951 Oit1-201ENSMUST00000022269 1253 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
LdlrP35951 AC192088.1-201ENSMUST00000227561 301 ntBASIC12.67□□□□□ -0.38
LdlrP35951 AC169036.1-201ENSMUST00000227994 296 ntBASIC12.67□□□□□ -0.38
LdlrP35951 Cd37-201ENSMUST00000033063 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
LdlrP35951 Fxyd1-202ENSMUST00000071697 522 ntAPPRIS P1 TSL 3 BASIC12.67□□□□□ -0.38
LdlrP35951 Tpd52-204ENSMUST00000094381 1074 ntTSL 3 BASIC12.67□□□□□ -0.38
LdlrP35951 Gm6091-201ENSMUST00000098307 165 ntBASIC12.67□□□□□ -0.38
LdlrP35951 Olfr95-202ENSMUST00000216318 4917 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
LdlrP35951 Crtc1-201ENSMUST00000076615 5683 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
LdlrP35951 Gm45684-201ENSMUST00000210244 1571 ntBASIC12.67□□□□□ -0.38
LdlrP35951 Polrmt-201ENSMUST00000020580 3755 ntAPPRIS P2 TSL 1 (best) BASIC12.67□□□□□ -0.38
LdlrP35951 Ggnbp1-203ENSMUST00000133257 5012 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
LdlrP35951 C230034O21Rik-201ENSMUST00000153659 2836 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
LdlrP35951 Brf2-201ENSMUST00000033877 1899 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
LdlrP35951 Hjurp-206ENSMUST00000147393 2030 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
LdlrP35951 Osbp2-203ENSMUST00000102950 3077 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 39.6 ms