Protein–RNA interactions for Protein: P35582

Foxa1, Hepatocyte nuclear factor 3-alpha, mousemouse

Predictions only

Length 468 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Foxa1P35582 Daglb-201ENSMUST00000045593 4651 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Foxa1P35582 Kcnc2-204ENSMUST00000219301 2944 ntAPPRIS P2 TSL 1 (best) BASIC11.77□□□□□ -0.52
Foxa1P35582 Them4-201ENSMUST00000049822 1781 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Foxa1P35582 Ppp2r2b-203ENSMUST00000120632 2081 ntAPPRIS ALT1 TSL 5 BASIC11.77□□□□□ -0.52
Foxa1P35582 Elmsan1-201ENSMUST00000046266 6848 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Foxa1P35582 Stau1-204ENSMUST00000109238 2976 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.52
Foxa1P35582 Sp3-202ENSMUST00000102689 4181 ntAPPRIS P2 TSL 1 (best) BASIC11.77□□□□□ -0.52
Foxa1P35582 Ntrk2-208ENSMUST00000225583 2719 ntBASIC11.77□□□□□ -0.52
Foxa1P35582 Alox12b-201ENSMUST00000036424 2431 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Foxa1P35582 Faap20-202ENSMUST00000105627 710 ntAPPRIS ALT2 TSL 2 BASIC11.77□□□□□ -0.53
Foxa1P35582 Fam71f2-201ENSMUST00000115286 1180 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Foxa1P35582 Gm12957-201ENSMUST00000117835 377 ntBASIC11.77□□□□□ -0.53
Foxa1P35582 Gm9431-201ENSMUST00000119765 1051 ntBASIC11.77□□□□□ -0.53
Foxa1P35582 Gm16379-201ENSMUST00000161469 348 ntBASIC11.77□□□□□ -0.53
Foxa1P35582 4930516B21Rik-201ENSMUST00000181600 1195 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Foxa1P35582 Gm3890-201ENSMUST00000182416 207 ntBASIC11.77□□□□□ -0.53
Foxa1P35582 Gm26728-201ENSMUST00000185268 595 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Foxa1P35582 Gm8762-201ENSMUST00000193486 339 ntBASIC11.77□□□□□ -0.53
Foxa1P35582 Gm38092-201ENSMUST00000195600 653 ntBASIC11.77□□□□□ -0.53
Foxa1P35582 AC153962.4-201ENSMUST00000217878 242 ntBASIC11.77□□□□□ -0.53
Foxa1P35582 AC165260.3-202ENSMUST00000224550 1031 ntBASIC11.77□□□□□ -0.53
Foxa1P35582 Olfr272-201ENSMUST00000051600 962 ntAPPRIS P1 BASIC11.77□□□□□ -0.53
Foxa1P35582 Vmn1r217-201ENSMUST00000091721 897 ntAPPRIS P1 BASIC11.77□□□□□ -0.53
Foxa1P35582 Myo18a-202ENSMUST00000092884 5117 ntAPPRIS ALT2 TSL 5 BASIC11.77□□□□□ -0.53
Foxa1P35582 Lin28a-201ENSMUST00000051674 3505 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Foxa1P35582 Cadm2-202ENSMUST00000120594 3248 ntAPPRIS ALT1 TSL 5 BASIC11.77□□□□□ -0.53
Foxa1P35582 Dixdc1-202ENSMUST00000117093 1613 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Foxa1P35582 Rnf185-201ENSMUST00000064364 2906 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Foxa1P35582 Alg14-201ENSMUST00000039442 2037 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Foxa1P35582 Abcg5-201ENSMUST00000066175 2351 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Foxa1P35582 Itgb4-203ENSMUST00000106458 5779 ntAPPRIS ALT2 TSL 5 BASIC11.77□□□□□ -0.53
Foxa1P35582 Rpe-202ENSMUST00000113995 2713 ntTSL 3 BASIC11.77□□□□□ -0.53
Foxa1P35582 Psmd13-208ENSMUST00000163610 1382 ntTSL 5 BASIC11.77□□□□□ -0.53
Foxa1P35582 Olfr533-206ENSMUST00000217179 2825 ntAPPRIS P1 TSL 5 BASIC11.77□□□□□ -0.53
Foxa1P35582 Cd34-201ENSMUST00000016638 2454 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Foxa1P35582 Rgs20-202ENSMUST00000118000 2125 ntAPPRIS ALT2 TSL 5 BASIC11.77□□□□□ -0.53
Foxa1P35582 Hsph1-201ENSMUST00000074846 3240 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Foxa1P35582 Pdxdc1-204ENSMUST00000115804 2880 ntAPPRIS P3 TSL 1 (best) BASIC11.77□□□□□ -0.53
Foxa1P35582 Gm8228-201ENSMUST00000189949 2192 ntBASIC11.77□□□□□ -0.53
Foxa1P35582 Spag1-201ENSMUST00000047348 3646 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Foxa1P35582 Sept12-201ENSMUST00000170323 2576 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Foxa1P35582 1110034G24Rik-202ENSMUST00000110132 1471 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Foxa1P35582 Pdss2-202ENSMUST00000159139 1467 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Foxa1P35582 Nkx6-3-201ENSMUST00000071588 2238 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Foxa1P35582 Cdadc1-201ENSMUST00000022555 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Foxa1P35582 Gm36745-201ENSMUST00000213455 1594 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Foxa1P35582 Ptpn7-203ENSMUST00000187985 1990 ntAPPRIS P1 TSL 5 BASIC11.76□□□□□ -0.53
Foxa1P35582 Tnrc6c-201ENSMUST00000026658 8724 ntAPPRIS P1 TSL 5 BASIC11.76□□□□□ -0.53
Foxa1P35582 Wnt9a-202ENSMUST00000108783 3318 ntAPPRIS P2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Foxa1P35582 Secisbp2-201ENSMUST00000040117 3328 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Foxa1P35582 Pou2f2-203ENSMUST00000108415 7095 ntAPPRIS P3 TSL 1 (best) BASIC11.76□□□□□ -0.53
Foxa1P35582 Ifnlr1-201ENSMUST00000074408 4182 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Foxa1P35582 Gm9947-201ENSMUST00000067599 2920 ntBASIC11.76□□□□□ -0.53
Foxa1P35582 Fnbp1-203ENSMUST00000100207 1680 ntTSL 5 BASIC11.76□□□□□ -0.53
Foxa1P35582 Htr2c-203ENSMUST00000112831 809 ntTSL 3 BASIC11.76□□□□□ -0.53
Foxa1P35582 Gm5187-201ENSMUST00000117317 991 ntBASIC11.76□□□□□ -0.53
Foxa1P35582 Fzr1-202ENSMUST00000118812 1215 ntTSL 5 BASIC11.76□□□□□ -0.53
Foxa1P35582 Adamtsl1-204ENSMUST00000120678 977 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Foxa1P35582 Gm16296-201ENSMUST00000159905 325 ntBASIC11.76□□□□□ -0.53
Foxa1P35582 U2af1l4-206ENSMUST00000163654 781 ntTSL 2 BASIC11.76□□□□□ -0.53
Foxa1P35582 U2af1l4-221ENSMUST00000167361 860 ntTSL 2 BASIC11.76□□□□□ -0.53
Foxa1P35582 Gm8738-201ENSMUST00000172606 329 ntBASIC11.76□□□□□ -0.53
Foxa1P35582 Gm37424-201ENSMUST00000191727 561 ntBASIC11.76□□□□□ -0.53
Foxa1P35582 Sox2ot-208ENSMUST00000197103 802 ntTSL 2 BASIC11.76□□□□□ -0.53
Foxa1P35582 Gm5149-201ENSMUST00000199768 620 ntTSL 3 BASIC11.76□□□□□ -0.53
Foxa1P35582 Gm44756-201ENSMUST00000206172 1069 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Foxa1P35582 Ceacam1-209ENSMUST00000206687 1061 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Foxa1P35582 Aprt-203ENSMUST00000211823 590 ntTSL 3 BASIC11.76□□□□□ -0.53
Foxa1P35582 Foxb1-201ENSMUST00000071281 2984 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Foxa1P35582 Gm24526-201ENSMUST00000082921 158 ntBASIC11.76□□□□□ -0.53
Foxa1P35582 Cd34-202ENSMUST00000110815 2554 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Foxa1P35582 Gm16090-201ENSMUST00000130296 1704 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Foxa1P35582 Zfp219-202ENSMUST00000166169 3017 ntAPPRIS P2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Foxa1P35582 Rbl1-201ENSMUST00000029170 4862 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Foxa1P35582 Fbxw7-201ENSMUST00000029727 2221 ntAPPRIS P3 TSL 1 (best) BASIC11.76□□□□□ -0.53
Foxa1P35582 Fam83h-201ENSMUST00000060807 4502 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Foxa1P35582 Gm37885-201ENSMUST00000192568 1391 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Foxa1P35582 C130012C08Rik-201ENSMUST00000194287 3665 ntBASIC11.76□□□□□ -0.53
Foxa1P35582 Otx1-201ENSMUST00000006071 2789 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Foxa1P35582 Arfip1-201ENSMUST00000098990 2799 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Foxa1P35582 Lrrfip1-202ENSMUST00000068167 2849 ntAPPRIS ALT2 TSL 5 BASIC11.76□□□□□ -0.53
Foxa1P35582 Gm6210-201ENSMUST00000204734 1942 ntBASIC11.76□□□□□ -0.53
Foxa1P35582 Lcor-201ENSMUST00000067795 4810 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Foxa1P35582 Acer1-201ENSMUST00000056113 2429 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Foxa1P35582 Plxnb2-202ENSMUST00000109331 6377 ntAPPRIS P1 TSL 5 BASIC11.76□□□□□ -0.53
Foxa1P35582 Bcs1l-203ENSMUST00000113733 1488 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Foxa1P35582 Pnck-203ENSMUST00000114473 1492 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Foxa1P35582 Ppp6r3-202ENSMUST00000113997 4952 ntAPPRIS ALT1 TSL 5 BASIC11.76□□□□□ -0.53
Foxa1P35582 M6pr-202ENSMUST00000112610 2539 ntAPPRIS P1 TSL 5 BASIC11.76□□□□□ -0.53
Foxa1P35582 M6pr-201ENSMUST00000007602 2515 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Foxa1P35582 Slc12a8-206ENSMUST00000122427 2070 ntAPPRIS ALT2 TSL 5 BASIC11.75□□□□□ -0.53
Foxa1P35582 Spock1-206ENSMUST00000189373 3128 ntTSL 5 BASIC11.75□□□□□ -0.53
Foxa1P35582 Tcf25-201ENSMUST00000057934 2738 ntAPPRIS P3 TSL 1 (best) BASIC11.75□□□□□ -0.53
Foxa1P35582 Ptp4a3-202ENSMUST00000163582 3808 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Foxa1P35582 5830462O15Rik-201ENSMUST00000214603 1655 ntBASIC11.75□□□□□ -0.53
Foxa1P35582 Endou-201ENSMUST00000023105 2404 ntAPPRIS P3 TSL 1 (best) BASIC11.75□□□□□ -0.53
Foxa1P35582 Ccdc187-201ENSMUST00000057224 3148 ntAPPRIS P2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Foxa1P35582 Elovl1-203ENSMUST00000102673 1248 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Foxa1P35582 Gm22018-201ENSMUST00000104357 131 ntBASIC11.75□□□□□ -0.53
Foxa1P35582 Igfbp2-202ENSMUST00000120564 991 ntTSL 3 BASIC11.75□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 56.8 ms