Protein–RNA interactions for Protein: P35276

Rab3d, Ras-related protein Rab-3D, mousemouse

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rab3dP35276 Pcdhga3-201ENSMUST00000073447 4720 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Rab3dP35276 Pcsk7-201ENSMUST00000039059 3876 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Rab3dP35276 Calm1-202ENSMUST00000110082 4115 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Rab3dP35276 Taco1-201ENSMUST00000002048 1383 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Rab3dP35276 Yae1d1-204ENSMUST00000222796 1382 ntTSL 5 BASIC10.66□□□□□ -0.7
Rab3dP35276 Naga-201ENSMUST00000023088 1913 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Rab3dP35276 Gm43365-201ENSMUST00000196522 2106 ntBASIC10.66□□□□□ -0.7
Rab3dP35276 Prkd1-201ENSMUST00000002765 3653 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Rab3dP35276 Dgkz-203ENSMUST00000111303 4169 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Rab3dP35276 Chrna9-201ENSMUST00000031108 1843 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Rab3dP35276 Plekha1-202ENSMUST00000075181 2301 ntAPPRIS P2 TSL 1 (best) BASIC10.66□□□□□ -0.7
Rab3dP35276 1110004F10Rik-203ENSMUST00000106608 927 ntTSL 3 BASIC10.66□□□□□ -0.7
Rab3dP35276 Gm29608-201ENSMUST00000190444 463 ntBASIC10.66□□□□□ -0.7
Rab3dP35276 Gm43703-201ENSMUST00000200523 763 ntBASIC10.66□□□□□ -0.7
Rab3dP35276 Gm30191-201ENSMUST00000205501 647 ntAPPRIS P1 TSL 5 BASIC10.66□□□□□ -0.7
Rab3dP35276 Gm35082-201ENSMUST00000207308 338 ntTSL 3 BASIC10.66□□□□□ -0.7
Rab3dP35276 Zswim7-201ENSMUST00000072916 732 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Rab3dP35276 Zfp423-201ENSMUST00000052250 4510 ntAPPRIS ALT2 TSL 1 (best) BASIC10.66□□□□□ -0.7
Rab3dP35276 Iqsec2-201ENSMUST00000096275 5252 ntAPPRIS P3 TSL 2 BASIC10.66□□□□□ -0.7
Rab3dP35276 Robo3-201ENSMUST00000034643 4712 ntAPPRIS ALT2 TSL 5 BASIC10.66□□□□□ -0.7
Rab3dP35276 A930024N18Rik-201ENSMUST00000181251 3955 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Rab3dP35276 Slx4ip-206ENSMUST00000180277 2723 ntAPPRIS P1 TSL 3 BASIC10.66□□□□□ -0.7
Rab3dP35276 Rapsn-202ENSMUST00000111445 1450 ntTSL 5 BASIC10.66□□□□□ -0.7
Rab3dP35276 Cog3-203ENSMUST00000227473 4197 ntBASIC10.66□□□□□ -0.7
Rab3dP35276 Gm16793-201ENSMUST00000181322 1680 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Rab3dP35276 Fuk-201ENSMUST00000041382 3838 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Rab3dP35276 Dab2ip-201ENSMUST00000065001 6392 ntAPPRIS P3 TSL 1 (best) BASIC10.66□□□□□ -0.7
Rab3dP35276 Rapgef6-202ENSMUST00000101206 5864 ntAPPRIS ALT2 TSL 5 BASIC10.66□□□□□ -0.7
Rab3dP35276 Lrp2bp-202ENSMUST00000110380 1603 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Rab3dP35276 Gabpb1-206ENSMUST00000110425 4153 ntAPPRIS ALT1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Rab3dP35276 Gm7224-201ENSMUST00000121359 2066 ntBASIC10.65□□□□□ -0.7
Rab3dP35276 Rnf165-202ENSMUST00000182024 4309 ntTSL 5 BASIC10.65□□□□□ -0.7
Rab3dP35276 Abca7-201ENSMUST00000043866 6590 ntAPPRIS P3 TSL 1 (best) BASIC10.65□□□□□ -0.7
Rab3dP35276 Slc5a11-207ENSMUST00000167299 2022 ntAPPRIS P1 TSL 5 BASIC10.65□□□□□ -0.7
Rab3dP35276 Ncoa6-203ENSMUST00000109670 7101 ntAPPRIS P2 TSL 5 BASIC10.65□□□□□ -0.7
Rab3dP35276 Gm8617-201ENSMUST00000118796 2222 ntBASIC10.65□□□□□ -0.7
Rab3dP35276 Bin3-201ENSMUST00000022680 1767 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Rab3dP35276 Usp5-202ENSMUST00000122110 3076 ntAPPRIS ALT1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Rab3dP35276 Gm37542-201ENSMUST00000192563 2832 ntBASIC10.65□□□□□ -0.7
Rab3dP35276 Armcx2-203ENSMUST00000119010 3007 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Rab3dP35276 E230020A03Rik-201ENSMUST00000194646 2386 ntBASIC10.65□□□□□ -0.7
Rab3dP35276 Usp14-201ENSMUST00000092096 2360 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Rab3dP35276 Gm29358-201ENSMUST00000186510 1734 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
Rab3dP35276 Spata7-203ENSMUST00000101146 1913 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
Rab3dP35276 Dnaic2-202ENSMUST00000092469 2799 ntAPPRIS P1 TSL 5 BASIC10.65□□□□□ -0.7
Rab3dP35276 B9d1-201ENSMUST00000102657 817 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Rab3dP35276 Ins2-204ENSMUST00000105932 455 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Rab3dP35276 Qdpr-202ENSMUST00000117425 1231 ntTSL 3 BASIC10.65□□□□□ -0.7
Rab3dP35276 Spcs2-ps-201ENSMUST00000122326 682 ntBASIC10.65□□□□□ -0.7
Rab3dP35276 Ecscr-204ENSMUST00000133064 1055 ntAPPRIS ALT2 TSL 2 BASIC10.65□□□□□ -0.7
Rab3dP35276 1700042O10Rik-201ENSMUST00000151032 1075 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
Rab3dP35276 Gm44344-201ENSMUST00000200287 129 ntBASIC10.65□□□□□ -0.7
Rab3dP35276 Gm44913-201ENSMUST00000208060 2990 ntBASIC10.65□□□□□ -0.7
Rab3dP35276 Gm42196-201ENSMUST00000209618 730 ntTSL 5 BASIC10.65□□□□□ -0.7
Rab3dP35276 Bet1l-209ENSMUST00000211624 769 ntTSL 3 BASIC10.65□□□□□ -0.7
Rab3dP35276 Ins2-201ENSMUST00000000220 478 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Rab3dP35276 AC169036.1-201ENSMUST00000227994 296 ntBASIC10.65□□□□□ -0.7
Rab3dP35276 Dkkl1-201ENSMUST00000033057 1149 ntAPPRIS P2 TSL 1 (best) BASIC10.65□□□□□ -0.7
Rab3dP35276 Sun2-201ENSMUST00000046259 3804 ntAPPRIS ALT2 TSL 1 (best) BASIC10.65□□□□□ -0.7
Rab3dP35276 Hist1h2bg-201ENSMUST00000079251 618 ntAPPRIS P1 BASIC10.65□□□□□ -0.7
Rab3dP35276 Ecscr-201ENSMUST00000097618 1114 ntAPPRIS P2 TSL 1 (best) BASIC10.65□□□□□ -0.7
Rab3dP35276 A130077B15Rik-201ENSMUST00000219429 2547 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
Rab3dP35276 Bbs4-201ENSMUST00000026265 2518 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Rab3dP35276 Gm45833-201ENSMUST00000211931 2730 ntTSL 5 BASIC10.65□□□□□ -0.7
Rab3dP35276 Chrnd-201ENSMUST00000073252 2925 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Rab3dP35276 Gm14149-201ENSMUST00000123048 1853 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
Rab3dP35276 Cyp4f40-201ENSMUST00000165061 1858 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Rab3dP35276 Zyg11a-201ENSMUST00000043793 2289 ntAPPRIS P2 TSL 5 BASIC10.65□□□□□ -0.7
Rab3dP35276 Srek1-201ENSMUST00000074616 3934 ntAPPRIS P1 TSL 5 BASIC10.65□□□□□ -0.7
Rab3dP35276 Bop1-201ENSMUST00000023217 2476 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Rab3dP35276 Nrg1-201ENSMUST00000073884 2452 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
Rab3dP35276 Frmd3-201ENSMUST00000084474 4136 ntAPPRIS P3 TSL 1 (best) BASIC10.65□□□□□ -0.7
Rab3dP35276 Twnk-201ENSMUST00000026227 3488 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Rab3dP35276 2010315B03Rik-202ENSMUST00000177714 2623 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.71
Rab3dP35276 Dnajc12-201ENSMUST00000043317 3025 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.71
Rab3dP35276 Zmat1-202ENSMUST00000113185 3378 ntAPPRIS ALT2 TSL 5 BASIC10.65□□□□□ -0.71
Rab3dP35276 Myocd-201ENSMUST00000101042 2585 ntTSL 1 (best) BASIC10.65□□□□□ -0.71
Rab3dP35276 Gm10406-202ENSMUST00000170738 1955 ntAPPRIS P1 TSL 5 BASIC10.65□□□□□ -0.71
Rab3dP35276 Cyth3-202ENSMUST00000116456 3738 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.71
Rab3dP35276 Plekhg2-201ENSMUST00000094644 4623 ntAPPRIS P3 TSL 1 (best) BASIC10.64□□□□□ -0.71
Rab3dP35276 Lig1-201ENSMUST00000098814 3091 ntAPPRIS P1 TSL 5 BASIC10.64□□□□□ -0.71
Rab3dP35276 Afg3l1-201ENSMUST00000001520 4227 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Rab3dP35276 St6galnac6-201ENSMUST00000072111 2277 ntAPPRIS P3 TSL 5 BASIC10.64□□□□□ -0.71
Rab3dP35276 Cttnbp2nl-201ENSMUST00000077548 4946 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Rab3dP35276 Tmem56-204ENSMUST00000135818 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC10.64□□□□□ -0.71
Rab3dP35276 Unc45bos-201ENSMUST00000156395 1306 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
Rab3dP35276 Tfdp2-205ENSMUST00000179416 2408 ntAPPRIS P3 TSL 1 (best) BASIC10.64□□□□□ -0.71
Rab3dP35276 Synpo-202ENSMUST00000115318 4479 ntAPPRIS ALT2 TSL 1 (best) BASIC10.64□□□□□ -0.71
Rab3dP35276 1110046J04Rik-202ENSMUST00000180906 2776 ntBASIC10.64□□□□□ -0.71
Rab3dP35276 Axl-202ENSMUST00000085948 3899 ntAPPRIS ALT2 TSL 1 (best) BASIC10.64□□□□□ -0.71
Rab3dP35276 Nexmif-202ENSMUST00000087879 10891 ntAPPRIS P2 TSL 1 (best) BASIC10.64□□□□□ -0.71
Rab3dP35276 Cmss1-201ENSMUST00000114371 930 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Rab3dP35276 Gm11400-201ENSMUST00000120853 1214 ntBASIC10.64□□□□□ -0.71
Rab3dP35276 Ms4a6d-202ENSMUST00000125291 679 ntTSL 3 BASIC10.64□□□□□ -0.71
Rab3dP35276 Gm15317-201ENSMUST00000129569 699 ntTSL 3 BASIC10.64□□□□□ -0.71
Rab3dP35276 Gm13383-201ENSMUST00000131190 1171 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
Rab3dP35276 1700121C08Rik-201ENSMUST00000137546 677 ntTSL 3 BASIC10.64□□□□□ -0.71
Rab3dP35276 Gm13066-201ENSMUST00000145263 884 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
Rab3dP35276 Fam219aos-201ENSMUST00000151164 708 ntTSL 2 BASIC10.64□□□□□ -0.71
Rab3dP35276 Banf1-202ENSMUST00000170010 742 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Retrieved 100 of 76,532 protein–RNA pairs in 36.3 ms