Protein–RNA interactions for Protein: P32043

Hoxc5, Homeobox protein Hox-C5, mousemouse

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxc5P32043 Rhox2f-201ENSMUST00000115173 799 ntAPPRIS P1 TSL 5 BASIC11.81□□□□□ -0.52
Hoxc5P32043 Gm20521-201ENSMUST00000134077 1245 ntAPPRIS P1 TSL 5 BASIC11.81□□□□□ -0.52
Hoxc5P32043 Gm16191-201ENSMUST00000141445 520 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Hoxc5P32043 Cpne8-201ENSMUST00000014777 697 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Hoxc5P32043 Dpy30-202ENSMUST00000164832 799 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Hoxc5P32043 Proscos-202ENSMUST00000178990 666 ntBASIC11.81□□□□□ -0.52
Hoxc5P32043 4930594M17Rik-201ENSMUST00000181204 1033 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Hoxc5P32043 Cryaa-201ENSMUST00000019192 1176 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Hoxc5P32043 Dnajb6-210ENSMUST00000196528 1018 ntTSL 5 BASIC11.81□□□□□ -0.52
Hoxc5P32043 Sct-204ENSMUST00000211667 506 ntAPPRIS ALT2 TSL 2 BASIC11.81□□□□□ -0.52
Hoxc5P32043 Tex12-202ENSMUST00000217236 1003 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Hoxc5P32043 Brk1-201ENSMUST00000035725 1095 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Hoxc5P32043 Elane-201ENSMUST00000046091 984 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Hoxc5P32043 Cercam-201ENSMUST00000047521 2715 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Hoxc5P32043 Met-202ENSMUST00000115442 4663 ntAPPRIS P1 TSL 5 BASIC11.81□□□□□ -0.52
Hoxc5P32043 Usp2-201ENSMUST00000034508 3867 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Hoxc5P32043 Rhox9-202ENSMUST00000170643 2422 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Hoxc5P32043 Retsat-205ENSMUST00000176364 1647 ntTSL 5 BASIC11.81□□□□□ -0.52
Hoxc5P32043 Yif1a-201ENSMUST00000025811 1493 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Hoxc5P32043 Igf2r-201ENSMUST00000024599 8887 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Hoxc5P32043 Trip4-201ENSMUST00000117083 1999 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Hoxc5P32043 Atg7-210ENSMUST00000182793 2459 ntAPPRIS P3 TSL 1 (best) BASIC11.81□□□□□ -0.52
Hoxc5P32043 Arhgap27-204ENSMUST00000107024 3976 ntAPPRIS ALT2 TSL 5 BASIC11.81□□□□□ -0.52
Hoxc5P32043 Sirt2-202ENSMUST00000122915 1828 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Hoxc5P32043 Fam60a-201ENSMUST00000054080 2697 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Hoxc5P32043 Arl13b-201ENSMUST00000089289 3528 ntAPPRIS P1 TSL 5 BASIC11.81□□□□□ -0.52
Hoxc5P32043 Armcx2-201ENSMUST00000035559 3384 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Hoxc5P32043 Gm45833-201ENSMUST00000211931 2730 ntTSL 5 BASIC11.8□□□□□ -0.52
Hoxc5P32043 Trmt1l-201ENSMUST00000065625 2749 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Hoxc5P32043 Ccng2-202ENSMUST00000121127 2570 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Hoxc5P32043 Gm42890-202ENSMUST00000167642 2566 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Hoxc5P32043 Ube2j2-204ENSMUST00000105582 1394 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Hoxc5P32043 Wdyhv1-201ENSMUST00000067563 1383 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Hoxc5P32043 Nupl1-206ENSMUST00000225111 2936 ntBASIC11.8□□□□□ -0.52
Hoxc5P32043 Dnajc5-201ENSMUST00000072334 6578 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Hoxc5P32043 Tgfbr2-201ENSMUST00000035014 3476 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Hoxc5P32043 Corin-201ENSMUST00000005352 4862 ntAPPRIS P3 TSL 1 (best) BASIC11.8□□□□□ -0.52
Hoxc5P32043 Dab2ip-205ENSMUST00000112986 5580 ntAPPRIS ALT2 TSL 5 BASIC11.8□□□□□ -0.52
Hoxc5P32043 Foxred1-202ENSMUST00000127996 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Hoxc5P32043 Pef1-201ENSMUST00000030563 1551 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Hoxc5P32043 Plk2-201ENSMUST00000022212 2800 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Hoxc5P32043 Myo18a-202ENSMUST00000092884 5117 ntAPPRIS ALT2 TSL 5 BASIC11.8□□□□□ -0.52
Hoxc5P32043 Mrpl44-201ENSMUST00000027464 1424 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Hoxc5P32043 Slc30a3-206ENSMUST00000202740 1989 ntTSL 5 BASIC11.8□□□□□ -0.52
Hoxc5P32043 Gm36500-201ENSMUST00000221821 1626 ntTSL 5 BASIC11.8□□□□□ -0.52
Hoxc5P32043 Nrxn1-202ENSMUST00000072671 8118 ntTSL 5 BASIC11.8□□□□□ -0.52
Hoxc5P32043 Zfp819-203ENSMUST00000120935 2156 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Hoxc5P32043 Gm11618-201ENSMUST00000117946 267 ntBASIC11.8□□□□□ -0.52
Hoxc5P32043 Gm11851-201ENSMUST00000132219 692 ntTSL 5 BASIC11.8□□□□□ -0.52
Hoxc5P32043 Xrcc2-204ENSMUST00000134972 464 ntTSL 3 BASIC11.8□□□□□ -0.52
Hoxc5P32043 Atp6v1f-203ENSMUST00000149646 806 ntTSL 5 BASIC11.8□□□□□ -0.52
Hoxc5P32043 Poc1a-205ENSMUST00000191434 1242 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Hoxc5P32043 5330425B07Rik-201ENSMUST00000196714 1027 ntBASIC11.8□□□□□ -0.52
Hoxc5P32043 Hax1-207ENSMUST00000198782 855 ntAPPRIS ALT2 TSL 5 BASIC11.8□□□□□ -0.52
Hoxc5P32043 Gm7287-201ENSMUST00000205267 602 ntBASIC11.8□□□□□ -0.52
Hoxc5P32043 Gm45059-201ENSMUST00000205558 1077 ntBASIC11.8□□□□□ -0.52
Hoxc5P32043 Aga-201ENSMUST00000033920 1181 ntAPPRIS P3 TSL 1 (best) BASIC11.8□□□□□ -0.52
Hoxc5P32043 Med8-202ENSMUST00000073881 1052 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Hoxc5P32043 Atxn7l1os2-201ENSMUST00000138617 2019 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Hoxc5P32043 Pkm-202ENSMUST00000163694 2041 ntAPPRIS ALT1 TSL 5 BASIC11.8□□□□□ -0.52
Hoxc5P32043 Lmnb2-201ENSMUST00000057623 3531 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Hoxc5P32043 Sh3kbp1-206ENSMUST00000112456 7317 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Hoxc5P32043 Wars-201ENSMUST00000109848 2831 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Hoxc5P32043 Ap1g2-201ENSMUST00000036041 2673 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Hoxc5P32043 Usp20-211ENSMUST00000170476 4970 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Hoxc5P32043 Osbp2-203ENSMUST00000102950 3077 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Hoxc5P32043 Gm16582-201ENSMUST00000159627 1930 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Hoxc5P32043 Rgs20-202ENSMUST00000118000 2125 ntAPPRIS ALT2 TSL 5 BASIC11.8□□□□□ -0.52
Hoxc5P32043 Pitpnm3-201ENSMUST00000075258 6555 ntAPPRIS P3 TSL 1 (best) BASIC11.8□□□□□ -0.52
Hoxc5P32043 Tars2-202ENSMUST00000074339 2313 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Hoxc5P32043 Slc39a8-205ENSMUST00000167390 3533 ntAPPRIS P1 TSL 5 BASIC11.8□□□□□ -0.52
Hoxc5P32043 Tollip-204ENSMUST00000151890 1753 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Hoxc5P32043 CT009713.10-201ENSMUST00000225013 1986 ntBASIC11.79□□□□□ -0.52
Hoxc5P32043 Cerk-203ENSMUST00000156546 2162 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Hoxc5P32043 Cmtm6-201ENSMUST00000035007 3383 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Hoxc5P32043 Grk4-202ENSMUST00000074651 3234 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Hoxc5P32043 Prkag2-202ENSMUST00000076306 2838 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Hoxc5P32043 Gm10371-201ENSMUST00000127429 1411 ntTSL 2 BASIC11.79□□□□□ -0.52
Hoxc5P32043 Cdc7-203ENSMUST00000117196 2864 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Hoxc5P32043 Cep41-203ENSMUST00000115131 2256 ntAPPRIS ALT2 TSL 5 BASIC11.79□□□□□ -0.52
Hoxc5P32043 Ppp1r18-203ENSMUST00000127442 3524 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Hoxc5P32043 Eps15l1-201ENSMUST00000163643 3129 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Hoxc5P32043 4933439K11Rik-203ENSMUST00000169111 1869 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Hoxc5P32043 Gm26677-201ENSMUST00000180553 1672 ntTSL 5 BASIC11.79□□□□□ -0.52
Hoxc5P32043 Tmem268-201ENSMUST00000077709 3765 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Hoxc5P32043 Rab11a-208ENSMUST00000172298 2336 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Hoxc5P32043 1700037H04Rik-202ENSMUST00000103188 1241 ntAPPRIS P3 TSL 1 (best) BASIC11.79□□□□□ -0.52
Hoxc5P32043 Tssc4-202ENSMUST00000105920 895 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Hoxc5P32043 Agbl3-202ENSMUST00000115012 790 ntTSL 3 BASIC11.79□□□□□ -0.52
Hoxc5P32043 Agbl3-203ENSMUST00000115014 805 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Hoxc5P32043 Fcnb-202ENSMUST00000117486 873 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Hoxc5P32043 Gm13123-201ENSMUST00000122173 492 ntBASIC11.79□□□□□ -0.52
Hoxc5P32043 Ift20-203ENSMUST00000128788 1141 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Hoxc5P32043 1700092C10Rik-201ENSMUST00000172547 585 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Hoxc5P32043 Gm20652-201ENSMUST00000177314 383 ntTSL 2 BASIC11.79□□□□□ -0.52
Hoxc5P32043 2410004P03Rik-203ENSMUST00000190691 953 ntTSL 2 BASIC11.79□□□□□ -0.52
Hoxc5P32043 Gm28198-201ENSMUST00000190938 471 ntTSL 3 BASIC11.79□□□□□ -0.52
Hoxc5P32043 Gm9124-201ENSMUST00000191789 1092 ntBASIC11.79□□□□□ -0.52
Hoxc5P32043 Gm9113-201ENSMUST00000192510 1018 ntBASIC11.79□□□□□ -0.52
Hoxc5P32043 Gm9131-201ENSMUST00000193557 1089 ntBASIC11.79□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 34.1 ms