Protein–RNA interactions for Protein: P31650

Slc6a11, Sodium- and chloride-dependent GABA transporter 3, mousemouse

Predictions only

Length 627 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc6a11P31650 Hhipl2-202ENSMUST00000192527 2310 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Slc6a11P31650 Asic3-202ENSMUST00000196296 1593 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
Slc6a11P31650 Gm26677-201ENSMUST00000180553 1672 ntTSL 5 BASIC12.12□□□□□ -0.47
Slc6a11P31650 Sp7-201ENSMUST00000078508 2906 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Slc6a11P31650 Rara-207ENSMUST00000164748 3129 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Slc6a11P31650 Cyth1-201ENSMUST00000017276 3135 ntAPPRIS ALT1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Slc6a11P31650 Tnks1bp1-201ENSMUST00000048400 4799 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Slc6a11P31650 Abcc6-201ENSMUST00000002850 4974 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Slc6a11P31650 Hps3-201ENSMUST00000012580 4016 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Slc6a11P31650 Ppp1r9b-202ENSMUST00000107748 3095 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Slc6a11P31650 Chrd-201ENSMUST00000007171 3275 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Slc6a11P31650 Aaas-201ENSMUST00000041208 1816 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Slc6a11P31650 Itgb4-203ENSMUST00000106458 5779 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
Slc6a11P31650 Myo18a-221ENSMUST00000167856 6132 ntTSL 5 BASIC12.11□□□□□ -0.47
Slc6a11P31650 Csf1-202ENSMUST00000118593 3058 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Slc6a11P31650 Shroom1-202ENSMUST00000093114 2886 ntTSL 2 BASIC12.11□□□□□ -0.47
Slc6a11P31650 Tfe3-205ENSMUST00000115678 2658 ntTSL 5 BASIC12.11□□□□□ -0.47
Slc6a11P31650 Polg-201ENSMUST00000073889 7837 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Slc6a11P31650 Mgme1-202ENSMUST00000110027 2359 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Slc6a11P31650 Dctn2-201ENSMUST00000026479 1784 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Slc6a11P31650 Rnf220-202ENSMUST00000094853 1675 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Slc6a11P31650 Gm12416-201ENSMUST00000120911 1008 ntBASIC12.11□□□□□ -0.47
Slc6a11P31650 Tspan17-208ENSMUST00000163915 459 ntTSL 5 BASIC12.11□□□□□ -0.47
Slc6a11P31650 Grp-202ENSMUST00000173530 617 ntAPPRIS ALT2 TSL 2 BASIC12.11□□□□□ -0.47
Slc6a11P31650 9130604C24Rik-201ENSMUST00000197965 956 ntBASIC12.11□□□□□ -0.47
Slc6a11P31650 Gm19710-201ENSMUST00000200257 640 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Slc6a11P31650 Gm44985-201ENSMUST00000206202 1016 ntBASIC12.11□□□□□ -0.47
Slc6a11P31650 Gemin7-201ENSMUST00000051364 763 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Slc6a11P31650 Myh14-203ENSMUST00000107900 6400 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
Slc6a11P31650 Mrpl50-201ENSMUST00000057829 2114 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Slc6a11P31650 Dcaf7-201ENSMUST00000058438 5750 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Slc6a11P31650 Heatr3-202ENSMUST00000121949 3086 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Slc6a11P31650 Rspo2-203ENSMUST00000226810 3091 ntAPPRIS P1 BASIC12.11□□□□□ -0.47
Slc6a11P31650 Rasgef1b-209ENSMUST00000168092 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Slc6a11P31650 Rasgef1b-201ENSMUST00000031276 2990 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
Slc6a11P31650 Serpinb12-202ENSMUST00000112724 1623 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Slc6a11P31650 Tbata-201ENSMUST00000035894 1506 ntAPPRIS P3 TSL 5 BASIC12.11□□□□□ -0.47
Slc6a11P31650 Bcl6-201ENSMUST00000023151 3525 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Slc6a11P31650 Sorbs3-202ENSMUST00000227259 2481 ntAPPRIS ALT2 BASIC12.11□□□□□ -0.47
Slc6a11P31650 Vax2os-203ENSMUST00000155159 4063 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Slc6a11P31650 Slc30a3-206ENSMUST00000202740 1989 ntTSL 5 BASIC12.1□□□□□ -0.47
Slc6a11P31650 Zp1-201ENSMUST00000025641 1963 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Slc6a11P31650 Wnt7b-202ENSMUST00000109424 3492 ntAPPRIS ALT1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Slc6a11P31650 Plekha2-204ENSMUST00000128715 3463 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Slc6a11P31650 Tmtc3-201ENSMUST00000058154 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Slc6a11P31650 Ifi47-204ENSMUST00000213728 1678 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
Slc6a11P31650 Dars2-201ENSMUST00000035430 3619 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Slc6a11P31650 Adora1-201ENSMUST00000038191 3625 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Slc6a11P31650 Celrr-202ENSMUST00000181433 1561 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Slc6a11P31650 Gpd2-201ENSMUST00000028167 5620 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Slc6a11P31650 Polrmt-201ENSMUST00000020580 3755 ntAPPRIS P2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Slc6a11P31650 Gm9755-201ENSMUST00000032981 1356 ntBASIC12.1□□□□□ -0.47
Slc6a11P31650 Mansc1-201ENSMUST00000047443 2376 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Slc6a11P31650 AL645783.1-201ENSMUST00000221416 1832 ntBASIC12.1□□□□□ -0.47
Slc6a11P31650 Tmem53-202ENSMUST00000106433 913 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Slc6a11P31650 Gm5940-201ENSMUST00000117582 1068 ntBASIC12.1□□□□□ -0.47
Slc6a11P31650 Gm15869-201ENSMUST00000126427 734 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Slc6a11P31650 Gm17077-201ENSMUST00000133179 279 ntTSL 5 BASIC12.1□□□□□ -0.47
Slc6a11P31650 Gm12953-201ENSMUST00000138426 751 ntTSL 2 BASIC12.1□□□□□ -0.47
Slc6a11P31650 Gm29127-201ENSMUST00000188304 517 ntBASIC12.1□□□□□ -0.47
Slc6a11P31650 Gm6013-201ENSMUST00000212264 699 ntBASIC12.1□□□□□ -0.47
Slc6a11P31650 AC192088.1-201ENSMUST00000227561 301 ntBASIC12.1□□□□□ -0.47
Slc6a11P31650 AC122459.1-201ENSMUST00000228373 885 ntBASIC12.1□□□□□ -0.47
Slc6a11P31650 Gm7399-201ENSMUST00000032395 858 ntBASIC12.1□□□□□ -0.47
Slc6a11P31650 Tex13c3-201ENSMUST00000089246 876 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Slc6a11P31650 Hoxd3os1-202ENSMUST00000139005 1701 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Slc6a11P31650 Iqsec3-203ENSMUST00000151397 8067 ntTSL 2 BASIC12.1□□□□□ -0.47
Slc6a11P31650 Cyth1-203ENSMUST00000106302 3119 ntAPPRIS P4 TSL 1 (best) BASIC12.1□□□□□ -0.47
Slc6a11P31650 Cpped1-202ENSMUST00000096272 2663 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Slc6a11P31650 Wdr45-223ENSMUST00000207675 1335 ntTSL 5 BASIC12.1□□□□□ -0.47
Slc6a11P31650 Ppp1r18-203ENSMUST00000127442 3524 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Slc6a11P31650 Esrp1-203ENSMUST00000108311 3864 ntTSL 5 BASIC12.1□□□□□ -0.47
Slc6a11P31650 Erich5-201ENSMUST00000060894 2383 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Slc6a11P31650 Rabepk-207ENSMUST00000145903 2968 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Slc6a11P31650 Abcg8-203ENSMUST00000171915 2284 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Slc6a11P31650 Mast3-203ENSMUST00000211948 4251 ntAPPRIS P2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Slc6a11P31650 Wipf3-201ENSMUST00000126637 4414 ntAPPRIS ALT2 TSL 5 BASIC12.09□□□□□ -0.47
Slc6a11P31650 Fsd1-201ENSMUST00000011733 1748 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Slc6a11P31650 Tmem132a-202ENSMUST00000120524 3895 ntTSL 5 BASIC12.09□□□□□ -0.47
Slc6a11P31650 Mypopos-202ENSMUST00000205975 2321 ntBASIC12.09□□□□□ -0.47
Slc6a11P31650 Tsku-207ENSMUST00000206414 2310 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Slc6a11P31650 Gm16853-201ENSMUST00000181812 1986 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Slc6a11P31650 Phrf1-201ENSMUST00000106027 5248 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
Slc6a11P31650 Tubb2a-201ENSMUST00000056427 1610 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Slc6a11P31650 Tfe3-203ENSMUST00000101695 2989 ntTSL 5 BASIC12.09□□□□□ -0.47
Slc6a11P31650 Rps8-201ENSMUST00000102696 860 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Slc6a11P31650 Gm11978-201ENSMUST00000122315 466 ntBASIC12.09□□□□□ -0.47
Slc6a11P31650 Gm12199-201ENSMUST00000137567 517 ntTSL 3 BASIC12.09□□□□□ -0.47
Slc6a11P31650 Gm13112-201ENSMUST00000138795 1258 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Slc6a11P31650 Gm10863-204ENSMUST00000147620 776 ntTSL 3 BASIC12.09□□□□□ -0.47
Slc6a11P31650 Gm12840-201ENSMUST00000156081 627 ntTSL 5 BASIC12.09□□□□□ -0.47
Slc6a11P31650 Agtpbp1-213ENSMUST00000167096 508 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Slc6a11P31650 1600014C10Rik-203ENSMUST00000177983 403 ntTSL 2 BASIC12.09□□□□□ -0.47
Slc6a11P31650 1700113H08Rik-202ENSMUST00000189456 974 ntTSL 5 BASIC12.09□□□□□ -0.47
Slc6a11P31650 Gm37047-201ENSMUST00000191992 533 ntTSL 5 BASIC12.09□□□□□ -0.47
Slc6a11P31650 Gm43714-201ENSMUST00000198351 1204 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Slc6a11P31650 Gm38671-201ENSMUST00000200573 130 ntBASIC12.09□□□□□ -0.47
Slc6a11P31650 Srgn-201ENSMUST00000020271 938 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Slc6a11P31650 AC165254.1-201ENSMUST00000220736 599 ntTSL 5 BASIC12.09□□□□□ -0.47
Slc6a11P31650 Oit1-201ENSMUST00000022269 1253 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 37.7 ms