Protein–RNA interactions for Protein: P31648

Slc6a1, Sodium- and chloride-dependent GABA transporter 1, mousemouse

Predictions only

Length 599 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc6a1P31648 Slc35b1-201ENSMUST00000021243 1523 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Slc6a1P31648 Gm17705-201ENSMUST00000172285 1555 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Slc6a1P31648 Thy1-201ENSMUST00000114840 1735 ntAPPRIS P1 TSL 2 BASIC10.97□□□□□ -0.65
Slc6a1P31648 C130026I21Rik-202ENSMUST00000093506 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC10.97□□□□□ -0.65
Slc6a1P31648 Ldhd-201ENSMUST00000070004 2273 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Slc6a1P31648 Uqcc1-203ENSMUST00000109632 2313 ntTSL 5 BASIC10.97□□□□□ -0.65
Slc6a1P31648 Pcdh10-203ENSMUST00000171554 7273 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Slc6a1P31648 Hmgcs2-202ENSMUST00000120541 2524 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Slc6a1P31648 Dcaf8-202ENSMUST00000191689 2754 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Slc6a1P31648 Slurp1-202ENSMUST00000190433 2859 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Slc6a1P31648 Nlrc3-203ENSMUST00000177551 5403 ntAPPRIS P1 TSL 2 BASIC10.96□□□□□ -0.65
Slc6a1P31648 Ldb3-201ENSMUST00000022327 5119 ntAPPRIS P4 TSL 1 (best) BASIC10.96□□□□□ -0.65
Slc6a1P31648 Dpyd-201ENSMUST00000039177 4492 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Slc6a1P31648 Ptp4a1-201ENSMUST00000027232 4145 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Slc6a1P31648 Agpat3-205ENSMUST00000105390 3513 ntAPPRIS P1 TSL 5 BASIC10.96□□□□□ -0.65
Slc6a1P31648 Trak1-213ENSMUST00000211439 3533 ntAPPRIS ALT2 TSL 1 (best) BASIC10.96□□□□□ -0.65
Slc6a1P31648 Gm34425-201ENSMUST00000216269 3079 ntTSL 5 BASIC10.96□□□□□ -0.65
Slc6a1P31648 Terb1-201ENSMUST00000064576 2950 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Slc6a1P31648 Gm8617-201ENSMUST00000118796 2222 ntBASIC10.96□□□□□ -0.65
Slc6a1P31648 Madd-203ENSMUST00000075269 5756 ntAPPRIS ALT2 TSL 2 BASIC10.96□□□□□ -0.65
Slc6a1P31648 Slc39a9-208ENSMUST00000219706 5427 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Slc6a1P31648 Hnrnpc-211ENSMUST00000228748 1691 ntAPPRIS P5 BASIC10.96□□□□□ -0.65
Slc6a1P31648 Plrg1-202ENSMUST00000122128 1608 ntTSL 5 BASIC10.96□□□□□ -0.65
Slc6a1P31648 Rin2-202ENSMUST00000110005 4641 ntAPPRIS ALT2 TSL 5 BASIC10.96□□□□□ -0.65
Slc6a1P31648 Dlk2-201ENSMUST00000061722 1532 ntTSL 5 BASIC10.96□□□□□ -0.65
Slc6a1P31648 Rapsn-203ENSMUST00000111446 1458 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Slc6a1P31648 Syce1-201ENSMUST00000026553 1460 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Slc6a1P31648 Commd1-201ENSMUST00000057843 1459 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Slc6a1P31648 2600006K01Rik-201ENSMUST00000047607 1406 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Slc6a1P31648 Trnt1-203ENSMUST00000113248 1398 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Slc6a1P31648 Art3-205ENSMUST00000120193 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC10.96□□□□□ -0.65
Slc6a1P31648 Spaca3-202ENSMUST00000103223 947 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Slc6a1P31648 Dhrs3-202ENSMUST00000105744 1226 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Slc6a1P31648 Plekhg5-204ENSMUST00000118648 3818 ntAPPRIS ALT2 TSL 5 BASIC10.96□□□□□ -0.65
Slc6a1P31648 Gm11557-201ENSMUST00000120200 1008 ntBASIC10.96□□□□□ -0.65
Slc6a1P31648 Gm15487-201ENSMUST00000122373 465 ntBASIC10.96□□□□□ -0.65
Slc6a1P31648 Mansc4-202ENSMUST00000123367 542 ntAPPRIS ALT2 TSL 2 BASIC10.96□□□□□ -0.65
Slc6a1P31648 Mcfd2-202ENSMUST00000129616 813 ntAPPRIS P1 TSL 3 BASIC10.96□□□□□ -0.65
Slc6a1P31648 Gm13066-201ENSMUST00000145263 884 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Slc6a1P31648 Ube4bos1-202ENSMUST00000151896 1286 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Slc6a1P31648 Gm8927-201ENSMUST00000181978 981 ntBASIC10.96□□□□□ -0.65
Slc6a1P31648 Gm29585-201ENSMUST00000185270 514 ntTSL 5 BASIC10.96□□□□□ -0.65
Slc6a1P31648 Ighv5-13-201ENSMUST00000193550 290 ntBASIC10.96□□□□□ -0.65
Slc6a1P31648 Ighv1-25-201ENSMUST00000195638 345 ntBASIC10.96□□□□□ -0.65
Slc6a1P31648 Gm20445-201ENSMUST00000061905 565 ntBASIC10.96□□□□□ -0.65
Slc6a1P31648 Gm3222-201ENSMUST00000071282 990 ntBASIC10.96□□□□□ -0.65
Slc6a1P31648 Hist1h2al-201ENSMUST00000091708 339 ntBASIC10.96□□□□□ -0.65
Slc6a1P31648 Ddx10-201ENSMUST00000065630 3128 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
Slc6a1P31648 Aph1a-201ENSMUST00000015894 2863 ntTSL 1 (best) BASIC10.96□□□□□ -0.66
Slc6a1P31648 Gm43984-201ENSMUST00000204572 2864 ntBASIC10.96□□□□□ -0.66
Slc6a1P31648 Krba1-203ENSMUST00000114571 6695 ntTSL 1 (best) BASIC10.96□□□□□ -0.66
Slc6a1P31648 Rsl1-201ENSMUST00000021997 2591 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
Slc6a1P31648 Lgals12-203ENSMUST00000159983 2470 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
Slc6a1P31648 Tspan14-201ENSMUST00000047652 2475 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
Slc6a1P31648 Gm26770-201ENSMUST00000180586 2237 ntTSL 1 (best) BASIC10.96□□□□□ -0.66
Slc6a1P31648 Specc1-213ENSMUST00000202179 6676 ntAPPRIS ALT2 TSL 1 (best) BASIC10.96□□□□□ -0.66
Slc6a1P31648 Cul5-201ENSMUST00000034529 3585 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
Slc6a1P31648 Gm14455-201ENSMUST00000138288 2146 ntTSL 1 (best) BASIC10.96□□□□□ -0.66
Slc6a1P31648 Upk3b-201ENSMUST00000062606 3530 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
Slc6a1P31648 Lef1-204ENSMUST00000106341 3357 ntTSL 1 (best) BASIC10.96□□□□□ -0.66
Slc6a1P31648 Lef1-202ENSMUST00000066849 3398 ntAPPRIS ALT1 TSL 5 BASIC10.96□□□□□ -0.66
Slc6a1P31648 1700082M22Rik-201ENSMUST00000067136 2022 ntTSL 1 (best) BASIC10.96□□□□□ -0.66
Slc6a1P31648 Pabpc4-204ENSMUST00000106243 3111 ntAPPRIS ALT1 TSL 5 BASIC10.95□□□□□ -0.66
Slc6a1P31648 Gtf2ird1-224ENSMUST00000202280 3052 ntAPPRIS ALT2 TSL 5 BASIC10.95□□□□□ -0.66
Slc6a1P31648 Cdk10-212ENSMUST00000213005 1580 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Slc6a1P31648 Adamts14-202ENSMUST00000120336 3645 ntAPPRIS ALT2 TSL 5 BASIC10.95□□□□□ -0.66
Slc6a1P31648 Kcnab2-201ENSMUST00000030768 3533 ntAPPRIS ALT1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Slc6a1P31648 Cab39-201ENSMUST00000097666 2369 ntAPPRIS P1 TSL 5 BASIC10.95□□□□□ -0.66
Slc6a1P31648 Tbl1xr1-211ENSMUST00000202747 4209 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Slc6a1P31648 Dnajc16-201ENSMUST00000038014 5969 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Slc6a1P31648 Tfdp2-204ENSMUST00000179065 2213 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Slc6a1P31648 Mospd3-202ENSMUST00000111007 1318 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Slc6a1P31648 H1fnt-201ENSMUST00000060855 1326 ntAPPRIS P1 BASIC10.95□□□□□ -0.66
Slc6a1P31648 Olfr222-203ENSMUST00000215339 2166 ntAPPRIS P1 TSL 5 BASIC10.95□□□□□ -0.66
Slc6a1P31648 Prom2-201ENSMUST00000028855 4796 ntAPPRIS P3 TSL 1 (best) BASIC10.95□□□□□ -0.66
Slc6a1P31648 Neat1-202ENSMUST00000174287 3004 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Slc6a1P31648 Gm6161-201ENSMUST00000121942 1102 ntBASIC10.95□□□□□ -0.66
Slc6a1P31648 Cdpf1-202ENSMUST00000125947 706 ntAPPRIS P1 TSL 2 BASIC10.95□□□□□ -0.66
Slc6a1P31648 3000002C10Rik-202ENSMUST00000133495 1008 ntBASIC10.95□□□□□ -0.66
Slc6a1P31648 Pttg1ip-205ENSMUST00000162429 652 ntAPPRIS ALT2 TSL 2 BASIC10.95□□□□□ -0.66
Slc6a1P31648 Hnrnpa3-207ENSMUST00000164947 1074 ntAPPRIS ALT2 TSL 5 BASIC10.95□□□□□ -0.66
Slc6a1P31648 Gm6254-201ENSMUST00000168178 1072 ntBASIC10.95□□□□□ -0.66
Slc6a1P31648 Gm6153-201ENSMUST00000172004 1058 ntBASIC10.95□□□□□ -0.66
Slc6a1P31648 Gm9242-201ENSMUST00000177820 1074 ntAPPRIS P1 BASIC10.95□□□□□ -0.66
Slc6a1P31648 Kansl3-206ENSMUST00000187628 336 ntTSL 5 BASIC10.95□□□□□ -0.66
Slc6a1P31648 2410004P03Rik-203ENSMUST00000190691 953 ntTSL 2 BASIC10.95□□□□□ -0.66
Slc6a1P31648 Gm38114-201ENSMUST00000191877 1232 ntBASIC10.95□□□□□ -0.66
Slc6a1P31648 Gm5641-202ENSMUST00000198699 1080 ntBASIC10.95□□□□□ -0.66
Slc6a1P31648 Tssc1-207ENSMUST00000222407 489 ntTSL 3 BASIC10.95□□□□□ -0.66
Slc6a1P31648 CT573086.1-201ENSMUST00000227202 1074 ntBASIC10.95□□□□□ -0.66
Slc6a1P31648 Pdzd11-202ENSMUST00000059099 1041 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Slc6a1P31648 Cldn13-201ENSMUST00000008987 1067 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Slc6a1P31648 Olfr658-202ENSMUST00000210641 2915 ntAPPRIS ALT1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Slc6a1P31648 Olfr658-201ENSMUST00000089296 2912 ntAPPRIS P2 TSL 1 (best) BASIC10.95□□□□□ -0.66
Slc6a1P31648 Gipr-201ENSMUST00000094790 2856 ntAPPRIS P1 TSL 5 BASIC10.95□□□□□ -0.66
Slc6a1P31648 Wdr81-204ENSMUST00000173320 6908 ntAPPRIS P1 TSL 5 BASIC10.95□□□□□ -0.66
Slc6a1P31648 Gm15991-202ENSMUST00000212123 3565 ntBASIC10.95□□□□□ -0.66
Slc6a1P31648 Lmnb2-204ENSMUST00000179022 3370 ntAPPRIS P2 TSL 1 (best) BASIC10.95□□□□□ -0.66
Slc6a1P31648 Gm6157-201ENSMUST00000199935 1897 ntBASIC10.95□□□□□ -0.66
Slc6a1P31648 Fam78a-201ENSMUST00000056406 4107 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Retrieved 100 of 76,532 protein–RNA pairs in 47.4 ms